Strain Fitness in Shewanella amazonensis SB2B around Sama_2599

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,104,297	-				+0.1
3,104,297	-				-0.4
3,104,317	+				-0.9
3,104,343	+				-1.8
3,104,393	-				+2.0
3,104,414	+				-1.5
3,104,415	-				+1.7
3,104,415	-				+0.1
3,104,415	-				-1.8
3,104,415	-				-1.7
3,104,417	+				-1.5
3,104,417	+				+2.7
3,104,417	+				-0.3
3,104,418	-				+3.3
3,104,418	-				-0.7
3,104,479	-		Sama_2598	0.13	-0.3
3,104,479	-		Sama_2598	0.13	-1.3
3,104,479	-		Sama_2598	0.13	+1.3
3,104,480	+		Sama_2598	0.13	+5.2
3,104,480	+		Sama_2598	0.13	-1.5
3,104,480	+		Sama_2598	0.13	+0.9
3,104,480	+		Sama_2598	0.13	+1.0
3,104,480	+		Sama_2598	0.13	-1.7
3,104,480	+		Sama_2598	0.13	+5.0
3,104,480	+		Sama_2598	0.13	-0.5
3,104,480	+		Sama_2598	0.13	+1.5
3,104,481	-		Sama_2598	0.13	-1.9
3,104,481	-		Sama_2598	0.13	+2.1
3,104,481	-		Sama_2598	0.13	+3.0
3,104,499	+		Sama_2598	0.17	+0.6
3,104,499	+		Sama_2598	0.17	+0.2
3,104,499	+		Sama_2598	0.17	-2.7
3,104,499	+		Sama_2598	0.17	-1.7
3,104,499	+		Sama_2598	0.17	-0.1
3,104,499	+		Sama_2598	0.17	-1.5
3,104,499	+		Sama_2598	0.17	-1.3
3,104,499	+		Sama_2598	0.17	-2.2
3,104,500	-		Sama_2598	0.17	-0.4
3,104,500	-		Sama_2598	0.17	+1.1
3,104,508	+		Sama_2598	0.19	+1.2
3,104,508	+		Sama_2598	0.19	-0.9
3,104,509	-		Sama_2598	0.19	-2.2
3,104,509	-		Sama_2598	0.19	-0.3
3,104,539	+		Sama_2598	0.26	-0.8
3,104,540	-		Sama_2598	0.26	+0.5
3,104,549	+		Sama_2598	0.28	-1.4
3,104,549	+		Sama_2598	0.28	+5.2
3,104,586	+		Sama_2598	0.35	-0.9
3,104,586	+		Sama_2598	0.35	+0.0
3,104,586	+		Sama_2598	0.35	-0.1
3,104,586	+		Sama_2598	0.35	+0.8
3,104,587	-		Sama_2598	0.36	+1.2
3,104,587	-		Sama_2598	0.36	+0.1
3,104,587	-		Sama_2598	0.36	-1.7
3,104,589	-		Sama_2598	0.36	-2.2
3,104,615	+		Sama_2598	0.42	-2.7
3,104,616	-		Sama_2598	0.42	-2.1
3,104,616	-		Sama_2598	0.42	+0.1
3,104,616	-		Sama_2598	0.42	+0.1
3,104,616	-		Sama_2598	0.42	-2.0
3,104,654	-		Sama_2598	0.50	-0.3
3,104,662	-		Sama_2598	0.51	-2.9
3,104,729	+		Sama_2598	0.66	-0.5
3,104,730	-		Sama_2598	0.66	+2.4
3,104,730	-		Sama_2598	0.66	+0.3
3,104,730	-		Sama_2598	0.66	+0.3
3,104,740	+		Sama_2598	0.68	+2.8
3,104,741	-		Sama_2598	0.68	-1.0
3,104,741	-		Sama_2598	0.68	+0.7
3,104,757	-		Sama_2598	0.72	-1.7
3,104,757	-		Sama_2598	0.72	-2.4
3,104,802	-		Sama_2598	0.81	-0.3
3,104,844	-				-0.3
3,104,844	-				-1.7
3,104,869	+				-0.1
3,104,870	-				+0.4
3,104,870	-				+2.8
3,104,870	-				-1.0
3,104,870	-				+1.8
3,104,870	-				-2.0
3,104,870	-				+0.8
3,104,870	-				-1.1
3,104,890	-				-1.1
3,104,912	+				+2.6
3,104,986	-				+3.0
3,105,150	+				+0.4
3,105,151	-				+6.0
3,105,238	+				-1.8
3,105,295	+				-0.5
3,105,296	-				-1.9
3,105,296	-				+0.5
3,105,316	+				+0.6
3,105,317	-				-0.8
3,105,317	-				-1.4
3,105,400	+		Sama_2599	0.15	-0.8
3,105,405	+		Sama_2599	0.15	-0.1
3,105,406	-		Sama_2599	0.15	-1.0
3,105,418	-		Sama_2599	0.16	+0.7
3,105,418	-		Sama_2599	0.16	-2.0
3,105,418	-		Sama_2599	0.16	-0.7
3,105,420	-		Sama_2599	0.17	-2.2
3,105,431	+		Sama_2599	0.18	+4.6
3,105,431	+		Sama_2599	0.18	+3.2
3,105,432	-		Sama_2599	0.18	-1.7
3,105,432	-		Sama_2599	0.18	-0.1
3,105,432	-		Sama_2599	0.18	-1.1
3,105,432	-		Sama_2599	0.18	-1.4
3,105,432	-		Sama_2599	0.18	-2.3
3,105,450	-		Sama_2599	0.20	-0.2
3,105,450	-		Sama_2599	0.20	+0.8
3,105,450	-		Sama_2599	0.20	-2.0
3,105,450	-		Sama_2599	0.20	-2.4
3,105,450	-		Sama_2599	0.20	+0.1
3,105,480	+		Sama_2599	0.23	+0.9
3,105,480	+		Sama_2599	0.23	-0.2
3,105,480	+		Sama_2599	0.23	+0.0
3,105,480	+		Sama_2599	0.23	+1.1
3,105,480	+		Sama_2599	0.23	+1.3
3,105,481	-		Sama_2599	0.23	+0.8
3,105,481	-		Sama_2599	0.23	-0.9
3,105,583	+		Sama_2599	0.33	+0.3
3,105,583	+		Sama_2599	0.33	-0.3
3,105,583	+		Sama_2599	0.33	+1.3
3,105,583	+		Sama_2599	0.33	-0.9
3,105,583	+		Sama_2599	0.33	-0.7
3,105,583	+		Sama_2599	0.33	+4.0
3,105,583	+		Sama_2599	0.33	-0.6
3,105,583	+		Sama_2599	0.33	-1.0
3,105,584	-		Sama_2599	0.33	+0.3
3,105,584	-		Sama_2599	0.33	+3.2
3,105,584	-		Sama_2599	0.33	+1.4
3,105,584	-		Sama_2599	0.33	+1.3
3,105,584	-		Sama_2599	0.33	+1.0
3,105,584	-		Sama_2599	0.33	-0.5
3,105,584	-		Sama_2599	0.33	-2.1
3,105,584	-		Sama_2599	0.33	+1.3
3,105,587	+		Sama_2599	0.33	-0.7
3,105,587	+		Sama_2599	0.33	-0.3
3,105,587	+		Sama_2599	0.33	-0.3
3,105,587	+		Sama_2599	0.33	-0.5
3,105,587	+		Sama_2599	0.33	+0.8
3,105,588	-		Sama_2599	0.33	-0.9
3,105,593	-		Sama_2599	0.34	-1.0
3,105,593	-		Sama_2599	0.34	-3.0
3,105,593	-		Sama_2599	0.34	+3.3
3,105,626	-		Sama_2599	0.37	+3.3
3,105,626	-		Sama_2599	0.37	-2.0
3,105,699	+		Sama_2599	0.45	-0.7
3,105,700	-		Sama_2599	0.45	+0.2
3,105,700	-		Sama_2599	0.45	-2.3
3,105,700	-		Sama_2599	0.45	-0.7
3,105,700	-		Sama_2599	0.45	+1.2
3,105,734	+		Sama_2599	0.48	-1.3
3,105,734	+		Sama_2599	0.48	+0.9
3,105,734	+		Sama_2599	0.48	-0.0
3,105,734	+		Sama_2599	0.48	-1.1
3,105,734	+		Sama_2599	0.48	+2.6
3,105,734	+		Sama_2599	0.48	-2.4
3,105,735	-		Sama_2599	0.48	-2.2
3,105,738	+		Sama_2599	0.48	+3.5
3,105,738	+		Sama_2599	0.48	+0.6
3,105,738	+		Sama_2599	0.48	-0.7
3,105,739	-		Sama_2599	0.49	+0.9
3,105,739	-		Sama_2599	0.49	-0.2
3,105,739	-		Sama_2599	0.49	-2.5
3,105,739	-		Sama_2599	0.49	+0.9
3,105,767	+		Sama_2599	0.51	-1.1
3,105,768	-		Sama_2599	0.51	-1.2
3,105,783	+		Sama_2599	0.53	-1.3
3,105,784	-		Sama_2599	0.53	+1.1
3,105,786	+		Sama_2599	0.53	-0.3
3,105,786	+		Sama_2599	0.53	-0.4
3,105,786	+		Sama_2599	0.53	+2.2
3,105,786	+		Sama_2599	0.53	+0.0
3,105,786	+		Sama_2599	0.53	-0.7
3,105,786	+		Sama_2599	0.53	-0.7
3,105,787	-		Sama_2599	0.53	-1.7
3,105,787	-		Sama_2599	0.53	-1.0
3,105,787	-		Sama_2599	0.53	-2.6
3,105,787	-		Sama_2599	0.53	+0.0
3,105,787	-		Sama_2599	0.53	-0.3
3,105,855	+		Sama_2599	0.60	+4.1
3,105,855	+		Sama_2599	0.60	-1.5
3,105,885	-		Sama_2599	0.63	-2.5
3,105,885	-		Sama_2599	0.63	-1.2
3,105,885	-		Sama_2599	0.63	-0.9
3,105,885	-		Sama_2599	0.63	+2.2
3,105,895	-		Sama_2599	0.64	+1.7
3,105,897	+		Sama_2599	0.64	+1.1
3,105,897	+		Sama_2599	0.64	-1.0
3,105,897	+		Sama_2599	0.64	+0.2
3,105,898	-		Sama_2599	0.64	+1.7
3,105,898	-		Sama_2599	0.64	-0.7
3,105,898	-		Sama_2599	0.64	+3.4
3,105,898	-		Sama_2599	0.64	-0.5
3,105,898	-		Sama_2599	0.64	+3.2
3,105,898	-		Sama_2599	0.64	-1.0
3,105,898	-		Sama_2599	0.64	+0.8
3,105,910	+		Sama_2599	0.66	-0.5
3,105,911	-		Sama_2599	0.66	+2.3
3,105,922	-		Sama_2599	0.67	+0.4
3,105,935	+		Sama_2599	0.68	-1.4
3,105,936	-		Sama_2599	0.68	-1.3
3,105,936	-		Sama_2599	0.68	-0.5
3,105,939	+		Sama_2599	0.68	-0.3
3,105,939	+		Sama_2599	0.68	-1.0
3,105,939	+		Sama_2599	0.68	-0.8
3,105,939	+		Sama_2599	0.68	+0.3
3,105,940	-		Sama_2599	0.69	-1.7
3,105,940	-		Sama_2599	0.69	+1.7
3,105,940	-		Sama_2599	0.69	+4.3
3,105,940	-		Sama_2599	0.69	+1.1
3,106,006	-		Sama_2599	0.75	+0.3
3,106,042	-		Sama_2599	0.79	+1.6
3,106,081	+		Sama_2599	0.83	-0.3
3,106,082	-		Sama_2599	0.83	-0.2
3,106,104	+		Sama_2599	0.85	+0.4
3,106,104	+		Sama_2599	0.85	+2.3
3,106,105	-		Sama_2599	0.85	-0.0
3,106,105	-		Sama_2599	0.85	-2.0
3,106,117	+		Sama_2599	0.86	+2.4
3,106,117	+		Sama_2599	0.86	-0.3
3,106,119	+		Sama_2599	0.86	+0.2
3,106,119	+		Sama_2599	0.86	+2.3
3,106,120	-		Sama_2599	0.87	-2.4
3,106,120	-		Sama_2599	0.87	-1.0
3,106,125	+		Sama_2599	0.87	+0.2
3,106,162	-				-0.5
3,106,162	-				-1.0
3,106,186	-				-0.4
3,106,186	-				-0.0
3,106,189	-				-1.0
3,106,228	+				-1.1
3,106,243	+				-3.4
3,106,244	-				+1.6
3,106,275	-				-0.1
3,106,287	+				-1.2
3,106,293	+				+2.1
3,106,293	+				-1.2
3,106,293	+				-2.0
3,106,293	+				+4.4
3,106,293	+				-1.1
3,106,293	+				-1.5
3,106,293	+				+1.8
3,106,293	+				-0.3
3,106,293	+				+0.3
3,106,294	-				-1.8
3,106,294	-				+0.9
3,106,294	-				+1.1
3,106,294	-				+0.8
3,106,294	-				-1.2
3,106,294	-				-0.3
3,106,294	-				-0.1
3,106,294	-				+0.3
3,106,294	-				+5.3
3,106,317	-				+1.0
3,106,343	-				+0.8
3,106,351	+				-1.8
3,106,352	-				-2.2
3,106,370	+				+0.3
3,106,370	+				+0.7
3,106,371	-				+0.9
3,106,396	-				+0.8
3,106,396	-				-0.8
3,106,396	-				+3.3
3,106,411	+				-2.2
3,106,412	-				+3.1
3,106,412	-				+2.7
3,106,417	+				+3.3
3,106,417	+				-2.0
3,106,418	-				-0.2
3,106,439	+				-0.1
3,106,464	+				+1.3
3,106,464	+				+2.5
3,106,464	+				-1.5
3,106,464	+				+3.7
3,106,468	+				-0.5
3,106,515	+				-1.9
3,106,516	-				-0.8
3,106,549	+				-0.1
3,106,578	+				+3.1
3,106,600	-				+3.2
3,106,671	-				-0.2
3,106,671	-				+0.2
3,106,702	-				-0.8
3,106,714	+				+1.7
3,107,246	-				+0.2
3,107,246	-				-0.6
3,107,246	-				+1.1
3,107,246	-				-1.4
3,107,246	-				+0.6