Strain Fitness in Shewanella amazonensis SB2B around Sama_1644

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
2,008,552	+		Sama_1642	0.38	-2.7
2,008,552	+		Sama_1642	0.38	+0.0
2,008,552	+		Sama_1642	0.38	-0.9
2,008,552	+		Sama_1642	0.38	-1.6
2,008,552	+		Sama_1642	0.38	+2.1
2,008,552	+		Sama_1642	0.38	-0.5
2,008,553	-		Sama_1642	0.38	-1.0
2,008,553	-		Sama_1642	0.38	+1.0
2,008,553	-		Sama_1642	0.38	-1.9
2,008,553	-		Sama_1642	0.38	-1.9
2,008,553	-		Sama_1642	0.38	-3.1
2,008,553	-		Sama_1642	0.38	-2.2
2,008,554	+		Sama_1642	0.39	-0.7
2,008,554	+		Sama_1642	0.39	-1.6
2,008,555	-		Sama_1642	0.39	-1.3
2,008,555	-		Sama_1642	0.39	-1.0
2,008,555	-		Sama_1642	0.39	-1.3
2,008,738	-		Sama_1642	0.69	-2.4
2,008,821	-		Sama_1642	0.82	-1.3
2,008,821	-		Sama_1642	0.82	-0.8
2,008,900	-				+0.2
2,008,900	-				-2.4
2,008,940	+				+0.0
2,008,941	-				-1.8
2,008,961	+				-3.4
2,008,961	+				-4.1
2,008,966	+				-2.1
2,008,966	+				-0.8
2,008,966	+				-2.3
2,009,027	+				-0.2
2,009,033	+				-0.8
2,009,080	+				-1.7
2,009,081	-				-0.5
2,009,081	-				+1.5
2,009,081	-				-2.5
2,009,103	+				-3.9
2,009,242	+		Sama_1643	0.37	-1.5
2,009,242	+		Sama_1643	0.37	-1.3
2,009,316	+		Sama_1643	0.55	-0.8
2,009,371	+		Sama_1643	0.68	-2.3
2,009,372	-		Sama_1643	0.69	-0.9
2,009,372	-		Sama_1643	0.69	-0.2
2,009,372	-		Sama_1643	0.69	-1.8
2,009,372	-		Sama_1643	0.69	-1.7
2,009,450	+		Sama_1643	0.87	-2.4
2,009,481	+				-0.9
2,009,482	-				+3.5
2,009,493	+				-0.7
2,009,494	-				-2.0
2,009,504	+				-1.7
2,009,504	+				+0.3
2,009,505	-				-0.7
2,009,505	-				+0.1
2,009,515	+				+1.0
2,009,516	-				-2.4
2,009,539	-				-0.9
2,009,544	+				-1.8
2,009,544	+				-0.2
2,009,545	-				-1.9
2,009,580	-				-1.9
2,009,590	+				+2.7
2,009,590	+				+0.3
2,009,591	-				-1.5
2,009,644	+		Sama_1644	0.11	-1.1
2,009,645	-		Sama_1644	0.11	+0.8
2,009,645	-		Sama_1644	0.11	-1.6
2,009,645	-		Sama_1644	0.11	+3.9
2,009,647	+		Sama_1644	0.11	-0.6
2,009,647	+		Sama_1644	0.11	+2.0
2,009,647	+		Sama_1644	0.11	-0.7
2,009,647	+		Sama_1644	0.11	-1.4
2,009,647	+		Sama_1644	0.11	-2.3
2,009,648	-		Sama_1644	0.11	-2.7
2,009,648	-		Sama_1644	0.11	+1.1
2,009,650	+		Sama_1644	0.12	+0.4
2,009,650	+		Sama_1644	0.12	+0.3
2,009,650	+		Sama_1644	0.12	+3.4
2,009,650	+		Sama_1644	0.12	-2.5
2,009,650	+		Sama_1644	0.12	+0.9
2,009,650	+		Sama_1644	0.12	-1.5
2,009,650	+		Sama_1644	0.12	-2.8
2,009,650	+		Sama_1644	0.12	+0.7
2,009,651	-		Sama_1644	0.12	-0.7
2,009,651	-		Sama_1644	0.12	-0.7
2,009,651	-		Sama_1644	0.12	-0.2
2,009,651	-		Sama_1644	0.12	-1.7
2,009,651	-		Sama_1644	0.12	+0.5
2,009,651	-		Sama_1644	0.12	-1.0
2,009,651	-		Sama_1644	0.12	+0.9
2,009,651	-		Sama_1644	0.12	-1.8
2,009,651	-		Sama_1644	0.12	-1.1
2,009,651	-		Sama_1644	0.12	-0.8
2,009,651	-		Sama_1644	0.12	-1.2
2,009,655	-		Sama_1644	0.12	+0.4
2,009,706	+		Sama_1644	0.16	-0.5
2,009,707	-		Sama_1644	0.16	+1.1
2,009,738	+		Sama_1644	0.19	-1.5
2,009,740	+		Sama_1644	0.19	-0.8
2,009,740	+		Sama_1644	0.19	+0.1
2,009,740	+		Sama_1644	0.19	-1.1
2,009,741	-		Sama_1644	0.19	-0.1
2,009,797	+		Sama_1644	0.24	+0.6
2,009,798	-		Sama_1644	0.24	-1.1
2,009,909	+		Sama_1644	0.33	+0.3
2,009,929	+		Sama_1644	0.35	-2.3
2,009,929	+		Sama_1644	0.35	+1.2
2,009,929	+		Sama_1644	0.35	+0.6
2,009,930	-		Sama_1644	0.35	-1.3
2,009,930	-		Sama_1644	0.35	-0.4
2,009,930	-		Sama_1644	0.35	-1.7
2,009,933	+		Sama_1644	0.35	+0.9
2,009,933	+		Sama_1644	0.35	+3.4
2,009,933	+		Sama_1644	0.35	-2.4
2,009,934	-		Sama_1644	0.36	+1.4
2,009,934	-		Sama_1644	0.36	-0.8
2,009,976	+		Sama_1644	0.39	+0.3
2,009,976	+		Sama_1644	0.39	+3.0
2,009,976	+		Sama_1644	0.39	-2.2
2,009,976	+		Sama_1644	0.39	-2.7
2,009,976	+		Sama_1644	0.39	-0.5
2,009,977	-		Sama_1644	0.39	-2.1
2,009,977	-		Sama_1644	0.39	-1.6
2,009,985	+		Sama_1644	0.40	+2.3
2,009,986	-		Sama_1644	0.40	+1.0
2,009,986	-		Sama_1644	0.40	-2.8
2,010,055	+		Sama_1644	0.46	+1.2
2,010,073	+		Sama_1644	0.47	+2.0
2,010,073	+		Sama_1644	0.47	+0.4
2,010,074	-		Sama_1644	0.47	-2.1
2,010,092	-		Sama_1644	0.49	-3.2
2,010,122	+		Sama_1644	0.51	-0.7
2,010,122	+		Sama_1644	0.51	-1.1
2,010,123	-		Sama_1644	0.52	-2.3
2,010,126	+		Sama_1644	0.52	-2.6
2,010,126	+		Sama_1644	0.52	-1.2
2,010,126	+		Sama_1644	0.52	-0.0
2,010,127	-		Sama_1644	0.52	+3.1
2,010,127	-		Sama_1644	0.52	-0.1
2,010,127	-		Sama_1644	0.52	+0.3
2,010,127	-		Sama_1644	0.52	-0.7
2,010,127	-		Sama_1644	0.52	+0.0
2,010,205	+		Sama_1644	0.58	-1.3
2,010,205	+		Sama_1644	0.58	+0.1
2,010,205	+		Sama_1644	0.58	+2.9
2,010,205	+		Sama_1644	0.58	-1.8
2,010,206	-		Sama_1644	0.59	-2.1
2,010,206	-		Sama_1644	0.59	-0.8
2,010,206	-		Sama_1644	0.59	+1.4
2,010,209	+		Sama_1644	0.59	+0.0
2,010,209	+		Sama_1644	0.59	+1.5
2,010,209	+		Sama_1644	0.59	-1.1
2,010,209	+		Sama_1644	0.59	-1.9
2,010,209	+		Sama_1644	0.59	+0.8
2,010,210	-		Sama_1644	0.59	+0.8
2,010,210	-		Sama_1644	0.59	+0.4
2,010,211	+		Sama_1644	0.59	-1.7
2,010,211	+		Sama_1644	0.59	-0.0
2,010,211	+		Sama_1644	0.59	+0.6
2,010,211	+		Sama_1644	0.59	+1.9
2,010,211	+		Sama_1644	0.59	-1.7
2,010,211	+		Sama_1644	0.59	-0.9
2,010,211	+		Sama_1644	0.59	-3.1
2,010,211	+		Sama_1644	0.59	+1.8
2,010,212	-		Sama_1644	0.59	-0.9
2,010,212	-		Sama_1644	0.59	-1.9
2,010,212	-		Sama_1644	0.59	+1.1
2,010,212	-		Sama_1644	0.59	+0.5
2,010,212	-		Sama_1644	0.59	-0.7
2,010,212	-		Sama_1644	0.59	-1.2
2,010,215	+		Sama_1644	0.59	-2.8
2,010,215	+		Sama_1644	0.59	-0.2
2,010,215	+		Sama_1644	0.59	+1.3
2,010,216	-		Sama_1644	0.59	+1.7
2,010,222	+		Sama_1644	0.60	-1.5
2,010,222	+		Sama_1644	0.60	+1.9
2,010,222	+		Sama_1644	0.60	+2.7
2,010,222	+		Sama_1644	0.60	+0.1
2,010,222	+		Sama_1644	0.60	-0.3
2,010,223	-		Sama_1644	0.60	+0.1
2,010,250	+		Sama_1644	0.62	+0.7
2,010,250	+		Sama_1644	0.62	+0.0
2,010,250	+		Sama_1644	0.62	+0.1
2,010,250	+		Sama_1644	0.62	-0.1
2,010,292	+		Sama_1644	0.66	+1.6
2,010,292	+		Sama_1644	0.66	+2.3
2,010,293	-		Sama_1644	0.66	-1.7
2,010,313	-		Sama_1644	0.68	-1.0
2,010,323	-		Sama_1644	0.68	-1.2
2,010,366	-		Sama_1644	0.72	+0.3
2,010,387	+		Sama_1644	0.74	-2.5
2,010,387	+		Sama_1644	0.74	-2.9
2,010,412	+		Sama_1644	0.76	-2.3
2,010,421	+		Sama_1644	0.77	-0.1
2,010,421	+		Sama_1644	0.77	+1.4
2,010,445	+		Sama_1644	0.79	-0.4
2,010,445	+		Sama_1644	0.79	-2.2
2,010,445	+		Sama_1644	0.79	-0.5
2,010,446	-		Sama_1644	0.79	-1.5
2,010,446	-		Sama_1644	0.79	-2.3
2,010,531	-		Sama_1644	0.86	+0.2
2,010,684	-				-0.4
2,010,684	-				+0.1
2,010,684	-				-1.1
2,010,687	+				-1.2
2,010,688	-				-2.0
2,010,701	-				-1.3
2,010,709	+				-1.4
2,010,709	+				-0.7
2,010,709	+				+0.4
2,010,709	+				-0.1
2,010,709	+				-1.0
2,010,709	+				-0.1
2,010,709	+				+1.5
2,010,709	+				+0.3
2,010,922	+		Sama_1645	0.11	-0.7
2,010,922	+		Sama_1645	0.11	+3.0
2,010,923	-		Sama_1645	0.11	+0.4
2,010,923	-		Sama_1645	0.11	-0.9
2,010,963	+		Sama_1645	0.16	-0.2
2,010,963	+		Sama_1645	0.16	+4.2
2,010,964	-		Sama_1645	0.16	+2.8
2,010,975	-		Sama_1645	0.17	-1.9
2,011,013	+		Sama_1645	0.22	-1.5
2,011,048	+		Sama_1645	0.26	+0.3
2,011,097	-		Sama_1645	0.32	-1.0
2,011,181	+		Sama_1645	0.42	-2.6
2,011,181	+		Sama_1645	0.42	-0.6
2,011,181	+		Sama_1645	0.42	+1.5
2,011,190	+		Sama_1645	0.43	-2.3
2,011,190	+		Sama_1645	0.43	-1.5
2,011,190	+		Sama_1645	0.43	-1.1
2,011,190	+		Sama_1645	0.43	+0.1
2,011,191	-		Sama_1645	0.43	+0.2
2,011,191	-		Sama_1645	0.43	-1.9
2,011,191	-		Sama_1645	0.43	-0.7
2,011,191	-		Sama_1645	0.43	+4.0
2,011,191	-		Sama_1645	0.43	-0.6
2,011,245	+		Sama_1645	0.50	+2.0
2,011,245	+		Sama_1645	0.50	-3.1
2,011,355	+		Sama_1645	0.63	+1.3
2,011,356	-		Sama_1645	0.63	+1.2
2,011,356	-		Sama_1645	0.63	-1.4
2,011,441	+		Sama_1645	0.73	+1.8
2,011,441	+		Sama_1645	0.73	+0.5
2,011,543	+		Sama_1645	0.86	+0.8
2,011,557	+		Sama_1645	0.87	-2.0
2,011,558	-		Sama_1645	0.88	+1.4
2,011,558	-		Sama_1645	0.88	+0.7
2,011,608	-				-0.3
2,011,685	+				-0.0
2,011,685	+				+2.4