Strain Fitness in Shewanella amazonensis SB2B around Sama_1566

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
1,908,618	-		Sama_1565	0.47	-0.8
1,908,629	-		Sama_1565	0.48	-1.0
1,908,633	+		Sama_1565	0.48	-1.5
1,908,633	+		Sama_1565	0.48	+0.5
1,908,633	+		Sama_1565	0.48	+0.8
1,908,633	+		Sama_1565	0.48	+0.6
1,908,712	+		Sama_1565	0.53	+5.5
1,908,713	-		Sama_1565	0.53	-2.0
1,908,849	+		Sama_1565	0.62	-2.4
1,908,960	+		Sama_1565	0.69	+0.3
1,908,960	+		Sama_1565	0.69	-1.7
1,908,960	+		Sama_1565	0.69	+1.2
1,908,960	+		Sama_1565	0.69	+0.1
1,908,961	-		Sama_1565	0.69	-1.7
1,908,961	-		Sama_1565	0.69	-1.6
1,909,001	+		Sama_1565	0.71	+0.4
1,909,001	+		Sama_1565	0.71	-0.6
1,909,025	+		Sama_1565	0.73	-0.9
1,909,025	+		Sama_1565	0.73	+0.5
1,909,025	+		Sama_1565	0.73	-0.3
1,909,026	-		Sama_1565	0.73	-0.8
1,909,026	-		Sama_1565	0.73	+3.0
1,909,026	-		Sama_1565	0.73	-1.4
1,909,026	-		Sama_1565	0.73	+1.2
1,909,026	-		Sama_1565	0.73	-1.0
1,909,026	-		Sama_1565	0.73	+0.2
1,909,026	-		Sama_1565	0.73	-1.8
1,909,031	+		Sama_1565	0.73	-0.0
1,909,109	+		Sama_1565	0.78	-0.2
1,909,170	-		Sama_1565	0.82	-1.8
1,909,171	+		Sama_1565	0.82	+0.8
1,909,171	+		Sama_1565	0.82	+0.3
1,909,171	+		Sama_1565	0.82	-2.0
1,909,171	+		Sama_1565	0.82	-0.3
1,909,353	+				-0.2
1,909,353	+				-1.9
1,909,353	+				-1.6
1,909,354	-				-1.0
1,909,354	-				+4.1
1,909,379	+				-0.0
1,909,397	+				+0.6
1,909,398	-				-0.3
1,909,417	-				-2.0
1,909,417	-				-2.3
1,909,452	+				-2.1
1,909,452	+				+3.8
1,909,453	-				+0.3
1,909,456	-				-0.6
1,909,480	-				-0.7
1,909,506	+				+2.2
1,909,551	+				+1.9
1,909,552	-				-0.4
1,909,552	-				+3.0
1,909,552	-				-0.0
1,909,604	+				-1.6
1,909,604	+				-1.5
1,909,604	+				+0.6
1,909,604	+				-0.5
1,909,604	+				-1.1
1,909,604	+				-1.9
1,909,604	+				-1.6
1,909,605	-				+0.2
1,909,605	-				+0.4
1,909,605	-				-0.3
1,909,739	+		Sama_1566	0.10	+1.3
1,909,809	+		Sama_1566	0.14	-0.8
1,909,809	+		Sama_1566	0.14	+0.8
1,909,810	-		Sama_1566	0.14	-0.8
1,909,810	-		Sama_1566	0.14	+0.5
1,909,810	-		Sama_1566	0.14	-1.7
1,909,828	-		Sama_1566	0.15	-0.4
1,909,828	-		Sama_1566	0.15	-0.4
1,909,828	-		Sama_1566	0.15	+1.6
1,909,828	-		Sama_1566	0.15	-1.4
1,909,837	-		Sama_1566	0.16	+0.5
1,909,837	-		Sama_1566	0.16	-0.9
1,909,837	-		Sama_1566	0.16	-0.4
1,909,837	-		Sama_1566	0.16	+0.7
1,909,867	-		Sama_1566	0.18	-0.4
1,909,891	+		Sama_1566	0.19	-2.0
1,909,891	+		Sama_1566	0.19	-1.7
1,909,892	-		Sama_1566	0.19	-0.8
1,910,055	-		Sama_1566	0.28	-0.0
1,910,072	+		Sama_1566	0.29	+0.6
1,910,072	+		Sama_1566	0.29	+0.9
1,910,072	+		Sama_1566	0.29	-0.5
1,910,072	+		Sama_1566	0.29	+3.6
1,910,072	+		Sama_1566	0.29	+0.6
1,910,072	+		Sama_1566	0.29	+0.3
1,910,073	-		Sama_1566	0.29	-1.4
1,910,073	-		Sama_1566	0.29	-0.4
1,910,073	-		Sama_1566	0.29	-1.3
1,910,073	-		Sama_1566	0.29	-1.8
1,910,073	-		Sama_1566	0.29	-0.9
1,910,073	-		Sama_1566	0.29	-1.8
1,910,073	-		Sama_1566	0.29	+2.3
1,910,073	-		Sama_1566	0.29	+0.1
1,910,114	+		Sama_1566	0.32	+3.1
1,910,184	+		Sama_1566	0.35	+4.2
1,910,195	-		Sama_1566	0.36	-0.3
1,910,219	+		Sama_1566	0.37	-1.0
1,910,220	-		Sama_1566	0.38	-1.8
1,910,276	+		Sama_1566	0.41	+0.3
1,910,294	+		Sama_1566	0.42	+5.2
1,910,344	-		Sama_1566	0.45	-0.4
1,910,486	+		Sama_1566	0.53	+1.6
1,910,494	+		Sama_1566	0.53	-0.9
1,910,495	-		Sama_1566	0.53	+2.7
1,910,567	+		Sama_1566	0.57	+2.4
1,910,603	-		Sama_1566	0.59	-1.0
1,910,648	-		Sama_1566	0.62	-1.1
1,910,648	-		Sama_1566	0.62	-2.3
1,910,648	-		Sama_1566	0.62	+3.1
1,910,648	-		Sama_1566	0.62	-0.8
1,910,669	+		Sama_1566	0.63	-2.8
1,910,787	+		Sama_1566	0.69	-2.4
1,910,843	-		Sama_1566	0.73	-1.8
1,911,003	+		Sama_1566	0.82	+0.1
1,911,004	-		Sama_1566	0.82	-1.1
1,911,004	-		Sama_1566	0.82	-0.3
1,911,004	-		Sama_1566	0.82	+0.4
1,911,062	-		Sama_1566	0.85	+4.1
1,911,105	+		Sama_1566	0.87	+5.3
1,911,150	+				-0.4
1,911,155	+				-0.8
1,911,155	+				-0.4
1,911,155	+				+1.4
1,911,155	+				+2.0
1,911,155	+				-0.7
1,911,156	-				+0.2
1,911,156	-				+0.2
1,911,166	+				-1.6
1,911,167	-				-2.2
1,911,247	-				-2.3
1,911,299	-				+0.0
1,911,304	-				+0.5
1,911,361	+				-1.4
1,911,376	-				-1.1
1,911,478	-				+1.2
1,911,514	-				-2.7
1,911,517	+		Sama_1567	0.10	+1.2
1,911,517	+		Sama_1567	0.10	-0.6
1,911,518	-		Sama_1567	0.10	-1.0
1,911,518	-		Sama_1567	0.10	-1.4
1,911,523	+		Sama_1567	0.11	+1.6
1,911,523	+		Sama_1567	0.11	-0.1
1,911,523	+		Sama_1567	0.11	-1.4
1,911,524	-		Sama_1567	0.11	+0.3
1,911,576	-		Sama_1567	0.20	+4.3
1,911,576	-		Sama_1567	0.20	-2.5
1,911,583	+		Sama_1567	0.21	-2.1
1,911,584	-		Sama_1567	0.21	-0.9
1,911,584	-		Sama_1567	0.21	+0.7
1,911,652	+		Sama_1567	0.32	-0.1
1,911,652	+		Sama_1567	0.32	-0.3
1,911,652	+		Sama_1567	0.32	+0.4
1,911,653	-		Sama_1567	0.32	-1.8
1,911,660	+		Sama_1567	0.33	-1.4
1,911,684	+		Sama_1567	0.37	+5.1
1,911,807	+		Sama_1567	0.57	-0.8
1,911,807	+		Sama_1567	0.57	+2.1
1,911,808	-		Sama_1567	0.57	+6.1
1,911,818	+		Sama_1567	0.59	-0.9
1,911,827	+		Sama_1567	0.60	-2.1
1,911,827	+		Sama_1567	0.60	-0.9
1,911,828	-		Sama_1567	0.60	+0.3
1,911,838	+		Sama_1567	0.62	-1.4
1,911,838	+		Sama_1567	0.62	+3.6
1,911,838	+		Sama_1567	0.62	+0.6
1,911,838	+		Sama_1567	0.62	-0.9
1,911,838	+		Sama_1567	0.62	+3.5
1,911,839	-		Sama_1567	0.62	-0.8
1,911,843	-		Sama_1567	0.63	+1.6
1,911,870	-		Sama_1567	0.67	-0.5
1,911,972	+		Sama_1567	0.83	-0.7
1,911,973	-		Sama_1567	0.84	+0.4
1,911,973	-		Sama_1567	0.84	-1.8
1,912,002	+		Sama_1567	0.88	-0.0
1,912,002	+		Sama_1567	0.88	-1.5
1,912,002	+		Sama_1567	0.88	+3.0
1,912,002	+		Sama_1567	0.88	+2.7
1,912,002	+		Sama_1567	0.88	-0.6
1,912,002	+		Sama_1567	0.88	-2.6
1,912,002	+		Sama_1567	0.88	+2.2
1,912,002	+		Sama_1567	0.88	+0.2
1,912,002	+		Sama_1567	0.88	+1.3
1,912,002	+		Sama_1567	0.88	-0.9
1,912,002	+		Sama_1567	0.88	+0.5
1,912,003	-		Sama_1567	0.88	+1.1
1,912,003	-		Sama_1567	0.88	+2.4
1,912,003	-		Sama_1567	0.88	+3.4
1,912,030	+				+2.8
1,912,030	+				-0.3
1,912,044	+				+1.5
1,912,044	+				+3.5
1,912,044	+				-1.7
1,912,112	+				+3.6
1,912,121	+				-0.8
1,912,121	+				+0.2
1,912,121	+				-0.3
1,912,121	+				-1.7
1,912,122	-				-1.1
1,912,137	+				+0.5
1,912,137	+				-1.4
1,912,154	+				+3.6
1,912,154	+				+0.3
1,912,195	-				-0.4
1,912,225	+				+0.7
1,912,225	+				+0.5
1,912,225	+				+3.2
1,912,225	+				-1.4
1,912,226	-				-1.3
1,912,226	-				-1.3
1,912,226	-				-1.4
1,912,226	-				+1.2
1,912,226	-				-1.0
1,912,226	-				+1.0
1,912,226	-				+1.0
1,912,229	+				+2.2
1,912,231	+				+0.2
1,912,257	-				-1.3
1,912,315	-				-2.4
1,912,315	-				-1.9