Strain Fitness in Shewanella amazonensis SB2B around Sama_0946

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
1,144,682	+		Sama_0945	0.11	-2.0
1,144,683	-		Sama_0945	0.11	+0.4
1,144,736	-		Sama_0945	0.17	+1.0
1,144,746	+		Sama_0945	0.18	+1.1
1,144,746	+		Sama_0945	0.18	-1.5
1,144,746	+		Sama_0945	0.18	+3.6
1,144,746	+		Sama_0945	0.18	-2.0
1,144,747	-		Sama_0945	0.18	-1.2
1,144,747	-		Sama_0945	0.18	-2.1
1,144,775	+		Sama_0945	0.21	+0.6
1,144,775	+		Sama_0945	0.21	+1.5
1,144,775	+		Sama_0945	0.21	-3.8
1,144,775	+		Sama_0945	0.21	-0.4
1,144,776	-		Sama_0945	0.21	-0.0
1,144,776	-		Sama_0945	0.21	-1.8
1,144,776	-		Sama_0945	0.21	+0.0
1,144,809	+		Sama_0945	0.24	+0.0
1,144,815	-		Sama_0945	0.25	-1.3
1,144,815	-		Sama_0945	0.25	+1.0
1,144,815	-		Sama_0945	0.25	+3.5
1,144,878	-		Sama_0945	0.31	-0.5
1,144,878	-		Sama_0945	0.31	-0.4
1,144,963	+		Sama_0945	0.39	-0.4
1,144,963	+		Sama_0945	0.39	-0.5
1,144,963	+		Sama_0945	0.39	-0.3
1,144,963	+		Sama_0945	0.39	-1.4
1,144,963	+		Sama_0945	0.39	+1.0
1,144,963	+		Sama_0945	0.39	-2.0
1,144,963	+		Sama_0945	0.39	+2.4
1,144,963	+		Sama_0945	0.39	-1.0
1,144,963	+		Sama_0945	0.39	+2.6
1,144,963	+		Sama_0945	0.39	-0.6
1,144,964	-		Sama_0945	0.40	+0.0
1,144,964	-		Sama_0945	0.40	-2.4
1,144,964	-		Sama_0945	0.40	-0.2
1,144,964	-		Sama_0945	0.40	+0.5
1,144,964	-		Sama_0945	0.40	+0.9
1,144,964	-		Sama_0945	0.40	+1.3
1,144,965	+		Sama_0945	0.40	-1.1
1,144,966	+		Sama_0945	0.40	-1.2
1,144,966	+		Sama_0945	0.40	-2.2
1,144,966	+		Sama_0945	0.40	+1.5
1,144,966	+		Sama_0945	0.40	+0.0
1,144,966	+		Sama_0945	0.40	-0.3
1,144,966	+		Sama_0945	0.40	-2.3
1,144,967	-		Sama_0945	0.40	+0.2
1,144,967	-		Sama_0945	0.40	-2.8
1,144,967	-		Sama_0945	0.40	-0.4
1,144,967	-		Sama_0945	0.40	+0.8
1,144,967	-		Sama_0945	0.40	+0.0
1,144,967	-		Sama_0945	0.40	-1.1
1,144,967	-		Sama_0945	0.40	-1.2
1,144,967	-		Sama_0945	0.40	+4.2
1,144,967	-		Sama_0945	0.40	-0.9
1,144,967	-		Sama_0945	0.40	-1.0
1,144,967	-		Sama_0945	0.40	+2.6
1,144,967	-		Sama_0945	0.40	-0.1
1,145,025	+		Sama_0945	0.46	+0.2
1,145,025	+		Sama_0945	0.46	+0.0
1,145,026	-		Sama_0945	0.46	+0.5
1,145,026	-		Sama_0945	0.46	+0.1
1,145,151	-		Sama_0945	0.58	-1.5
1,145,162	+		Sama_0945	0.59	-2.4
1,145,208	+		Sama_0945	0.64	-0.5
1,145,240	+		Sama_0945	0.67	+0.6
1,145,240	+		Sama_0945	0.67	-0.2
1,145,240	+		Sama_0945	0.67	+1.8
1,145,240	+		Sama_0945	0.67	+0.5
1,145,255	+		Sama_0945	0.69	-0.4
1,145,256	-		Sama_0945	0.69	+2.7
1,145,358	+		Sama_0945	0.79	+1.6
1,145,359	-		Sama_0945	0.79	-0.7
1,145,359	-		Sama_0945	0.79	-0.3
1,145,359	-		Sama_0945	0.79	-1.8
1,145,359	-		Sama_0945	0.79	-0.9
1,145,359	-		Sama_0945	0.79	-0.9
1,145,481	+				+1.6
1,145,481	+				+2.8
1,145,481	+				+0.7
1,145,481	+				-0.2
1,145,481	+				-0.5
1,145,481	+				+1.0
1,145,482	-				-0.5
1,145,482	-				+0.0
1,145,553	-				+1.1
1,145,566	-				-1.8
1,145,566	-				+0.1
1,145,566	-				-2.5
1,145,709	-		Sama_0946	0.11	-1.4
1,145,740	-		Sama_0946	0.13	+0.3
1,145,755	-		Sama_0946	0.15	-1.4
1,145,779	-		Sama_0946	0.17	+0.5
1,145,848	+		Sama_0946	0.23	+2.1
1,145,848	+		Sama_0946	0.23	+1.6
1,145,876	+		Sama_0946	0.25	-0.4
1,145,876	+		Sama_0946	0.25	-0.4
1,145,877	-		Sama_0946	0.26	+0.6
1,145,877	-		Sama_0946	0.26	-1.1
1,145,877	-		Sama_0946	0.26	-1.8
1,146,062	+		Sama_0946	0.42	-1.0
1,146,063	-		Sama_0946	0.42	-0.6
1,146,068	+		Sama_0946	0.42	-1.3
1,146,068	+		Sama_0946	0.42	-0.2
1,146,068	+		Sama_0946	0.42	+0.5
1,146,068	+		Sama_0946	0.42	+2.9
1,146,163	+		Sama_0946	0.51	+0.0
1,146,207	+		Sama_0946	0.55	-2.2
1,146,207	+		Sama_0946	0.55	-0.5
1,146,208	-		Sama_0946	0.55	+0.5
1,146,208	-		Sama_0946	0.55	-0.8
1,146,217	+		Sama_0946	0.56	+1.6
1,146,217	+		Sama_0946	0.56	+3.8
1,146,217	+		Sama_0946	0.56	-1.1
1,146,217	+		Sama_0946	0.56	-1.5
1,146,217	+		Sama_0946	0.56	-1.4
1,146,217	+		Sama_0946	0.56	-2.3
1,146,217	+		Sama_0946	0.56	-1.9
1,146,218	-		Sama_0946	0.56	-0.4
1,146,218	-		Sama_0946	0.56	+3.3
1,146,218	-		Sama_0946	0.56	-0.5
1,146,218	-		Sama_0946	0.56	-1.0
1,146,218	-		Sama_0946	0.56	-1.6
1,146,218	-		Sama_0946	0.56	+1.0
1,146,219	+		Sama_0946	0.56	-2.1
1,146,220	-		Sama_0946	0.56	-0.0
1,146,345	+		Sama_0946	0.67	-0.4
1,146,345	+		Sama_0946	0.67	+0.0
1,146,346	-		Sama_0946	0.67	+0.5
1,146,450	-		Sama_0946	0.76	+4.5
1,146,450	-		Sama_0946	0.76	-1.2
1,146,468	+		Sama_0946	0.78	+0.4
1,146,468	+		Sama_0946	0.78	+1.0
1,146,468	+		Sama_0946	0.78	+1.9
1,146,468	+		Sama_0946	0.78	-0.7
1,146,636	+				+0.8
1,146,636	+				+1.1
1,146,653	+				-1.8
1,146,653	+				-1.1
1,146,654	-				+1.6
1,146,728	+				+1.1
1,146,728	+				-0.5
1,146,728	+				+0.4
1,146,729	-				-0.1
1,146,729	-				+0.1
1,146,729	-				-0.3
1,146,776	+				-0.2
1,146,776	+				-2.6
1,146,782	+				+3.0
1,146,806	+				+1.5
1,146,806	+				+0.9
1,146,807	-				+0.0
1,146,816	-				-1.7
1,146,822	+				-2.0
1,146,823	-				-0.4
1,146,823	-				+1.4
1,146,823	-				-0.5
1,146,855	+				-1.2
1,146,866	+				-1.2
1,146,866	+				+1.0
1,146,930	+				+4.5
1,146,993	+		Sama_0947	0.14	+2.6
1,146,993	+		Sama_0947	0.14	+2.2
1,146,993	+		Sama_0947	0.14	+0.5
1,146,993	+		Sama_0947	0.14	-0.7
1,146,994	-		Sama_0947	0.15	+0.4
1,146,994	-		Sama_0947	0.15	-0.5
1,146,994	-		Sama_0947	0.15	-1.3
1,146,994	-		Sama_0947	0.15	-1.8
1,147,012	-		Sama_0947	0.16	-0.8
1,147,134	-		Sama_0947	0.27	+3.2
1,147,171	+		Sama_0947	0.30	-0.4
1,147,172	-		Sama_0947	0.30	-3.0
1,147,217	+		Sama_0947	0.34	+1.7
1,147,217	+		Sama_0947	0.34	+1.6
1,147,217	+		Sama_0947	0.34	+0.3
1,147,217	+		Sama_0947	0.34	+0.6
1,147,217	+		Sama_0947	0.34	-1.5
1,147,217	+		Sama_0947	0.34	-1.3
1,147,217	+		Sama_0947	0.34	+1.2
1,147,217	+		Sama_0947	0.34	-1.8
1,147,218	-		Sama_0947	0.34	-0.4
1,147,218	-		Sama_0947	0.34	+4.0
1,147,218	-		Sama_0947	0.34	-1.1
1,147,218	-		Sama_0947	0.34	-2.3
1,147,223	-		Sama_0947	0.35	+0.2
1,147,285	-		Sama_0947	0.40	+6.9
1,147,304	+		Sama_0947	0.42	-1.1
1,147,416	-		Sama_0947	0.52	-2.1
1,147,416	-		Sama_0947	0.52	+1.4
1,147,444	+		Sama_0947	0.54	+2.4
1,147,444	+		Sama_0947	0.54	+2.6
1,147,444	+		Sama_0947	0.54	-0.3
1,147,444	+		Sama_0947	0.54	-0.8
1,147,444	+		Sama_0947	0.54	+0.7
1,147,444	+		Sama_0947	0.54	-3.0
1,147,444	+		Sama_0947	0.54	+4.1
1,147,444	+		Sama_0947	0.54	-1.9
1,147,445	-		Sama_0947	0.54	-0.2
1,147,445	-		Sama_0947	0.54	+1.9
1,147,445	-		Sama_0947	0.54	+2.2
1,147,445	-		Sama_0947	0.54	+1.5
1,147,445	-		Sama_0947	0.54	+1.6
1,147,445	-		Sama_0947	0.54	+4.5
1,147,445	-		Sama_0947	0.54	-0.1
1,147,459	+		Sama_0947	0.55	+1.6
1,147,460	-		Sama_0947	0.55	+0.2
1,147,473	+		Sama_0947	0.57	+0.5
1,147,473	+		Sama_0947	0.57	-0.4
1,147,473	+		Sama_0947	0.57	+2.8
1,147,473	+		Sama_0947	0.57	+2.9
1,147,496	+		Sama_0947	0.59	+2.6
1,147,497	-		Sama_0947	0.59	+0.3
1,147,533	+		Sama_0947	0.62	-0.4
1,147,534	-		Sama_0947	0.62	+1.6
1,147,534	-		Sama_0947	0.62	-0.2
1,147,670	+		Sama_0947	0.74	+2.2
1,147,670	+		Sama_0947	0.74	+0.7
1,147,670	+		Sama_0947	0.74	+2.0
1,147,715	-		Sama_0947	0.78	-0.8
1,147,715	-		Sama_0947	0.78	-2.1