Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1864

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
1,942,881	+				-0.3
1,942,953	-		Dshi_1864	0.12	-0.4
1,943,032	-		Dshi_1864	0.20	-0.4
1,943,171	+		Dshi_1864	0.32	+0.2
1,943,249	+		Dshi_1864	0.39	-0.4
1,943,393	+		Dshi_1864	0.52	-1.3
1,943,547	-		Dshi_1864	0.66	-0.4
1,943,551	+		Dshi_1864	0.66	+0.4
1,943,559	-		Dshi_1864	0.67	-0.4
1,943,593	+		Dshi_1864	0.70	-1.7
1,943,635	+		Dshi_1864	0.74	-0.5
1,943,642	+		Dshi_1864	0.74	-0.3
1,943,714	-		Dshi_1864	0.81	-2.4
1,943,749	+		Dshi_1864	0.84	-0.6
1,943,757	-		Dshi_1864	0.85	-3.1
1,943,780	+		Dshi_1864	0.87	-0.5
1,943,788	-		Dshi_1864	0.88	-0.1
1,943,797	+		Dshi_1864	0.88	-0.5
1,943,853	+				-0.7
1,943,867	+				+0.2
1,943,868	+				+0.0
1,943,868	+				-1.0
1,943,908	+				-0.3
1,943,908	+				-0.6
1,943,908	+				+0.1
1,943,916	-				-2.1
1,943,916	-				-0.7
1,943,916	-				-0.0
1,943,916	-				-0.0
1,943,916	-				-0.6
1,943,916	-				+0.5
1,943,916	-				+0.8
1,943,916	-				+0.1
1,943,916	-				-0.2
1,943,916	-				-0.9
1,943,916	-				-1.1
1,943,920	+				+1.7
1,943,921	-				-0.1
1,943,931	+				-0.7
1,943,931	-				-0.2
1,943,931	-				+0.4
1,943,939	+				-0.2
1,944,015	+				-0.2
1,944,019	+				+1.1
1,944,021	+				-0.1
1,944,024	-				-0.8
1,944,029	+				-0.7
1,944,029	+				-0.7
1,944,029	-				-0.4
1,944,029	-				+0.1
1,944,029	-				+1.1
1,944,037	+				+0.6
1,944,038	+				+0.0
1,944,038	+				-0.6
1,944,042	+				-0.7
1,944,042	+				+0.3
1,944,042	+				-0.8
1,944,047	+				-0.6
1,944,047	+				+0.1
1,944,047	+				-1.2
1,944,047	+				-0.2
1,944,055	-				+0.3
1,944,055	-				+0.7
1,944,055	-				-0.1
1,944,055	-				-0.1
1,944,055	-				+0.2
1,944,055	-				-0.5
1,944,055	-				-1.0
1,944,060	-				-1.4
1,944,130	-				+0.8
1,944,143	+		Dshi_1865	0.11	+0.3
1,944,147	-		Dshi_1865	0.12	-0.2
1,944,150	-		Dshi_1865	0.12	+0.4
1,944,157	-		Dshi_1865	0.13	-0.0
1,944,158	-		Dshi_1865	0.13	-1.2
1,944,165	+		Dshi_1865	0.14	-1.0
1,944,173	-		Dshi_1865	0.15	-1.2
1,944,175	+		Dshi_1865	0.15	-0.6
1,944,190	+		Dshi_1865	0.17	-0.3
1,944,190	+		Dshi_1865	0.17	+0.8
1,944,191	+		Dshi_1865	0.17	+0.3
1,944,198	-		Dshi_1865	0.18	+0.2
1,944,201	+		Dshi_1865	0.18	-0.8
1,944,206	+		Dshi_1865	0.19	-0.6
1,944,209	-		Dshi_1865	0.19	+0.2
1,944,211	+		Dshi_1865	0.19	+0.2
1,944,214	+		Dshi_1865	0.19	+1.3
1,944,216	+		Dshi_1865	0.20	+0.1
1,944,216	+		Dshi_1865	0.20	-0.5
1,944,224	-		Dshi_1865	0.21	-0.1
1,944,246	+		Dshi_1865	0.23	+0.2
1,944,254	-		Dshi_1865	0.24	+0.0
1,944,254	-		Dshi_1865	0.24	+0.4
1,944,254	-		Dshi_1865	0.24	+0.1
1,944,254	-		Dshi_1865	0.24	+0.1
1,944,254	-		Dshi_1865	0.24	+0.4
1,944,440	+		Dshi_1865	0.45	+1.2
1,944,440	+		Dshi_1865	0.45	-0.2
1,944,448	-		Dshi_1865	0.46	+0.2
1,944,448	-		Dshi_1865	0.46	-0.5
1,944,448	-		Dshi_1865	0.46	+0.2
1,944,450	+		Dshi_1865	0.47	+0.0
1,944,450	+		Dshi_1865	0.47	-0.5
1,944,450	+		Dshi_1865	0.47	-0.5
1,944,450	+		Dshi_1865	0.47	+0.1
1,944,450	+		Dshi_1865	0.47	-0.2
1,944,455	+		Dshi_1865	0.47	-0.7
1,944,455	+		Dshi_1865	0.47	-0.7
1,944,458	-		Dshi_1865	0.47	-0.3
1,944,458	-		Dshi_1865	0.47	-1.5
1,944,463	-		Dshi_1865	0.48	-0.1
1,944,463	-		Dshi_1865	0.48	+0.0
1,944,463	-		Dshi_1865	0.48	-0.7
1,944,463	-		Dshi_1865	0.48	-0.5
1,944,463	-		Dshi_1865	0.48	+0.5
1,944,463	-		Dshi_1865	0.48	+0.1
1,944,491	-		Dshi_1865	0.51	-0.8
1,944,496	+		Dshi_1865	0.52	+0.7
1,944,496	+		Dshi_1865	0.52	-0.7
1,944,496	+		Dshi_1865	0.52	-0.4
1,944,496	+		Dshi_1865	0.52	-0.3
1,944,496	+		Dshi_1865	0.52	+0.3
1,944,496	+		Dshi_1865	0.52	+0.1
1,944,496	+		Dshi_1865	0.52	+1.1
1,944,496	+		Dshi_1865	0.52	-0.6
1,944,496	+		Dshi_1865	0.52	-0.2
1,944,496	+		Dshi_1865	0.52	-0.8
1,944,496	+		Dshi_1865	0.52	+0.1
1,944,496	+		Dshi_1865	0.52	-0.3
1,944,504	-		Dshi_1865	0.53	-1.3
1,944,504	-		Dshi_1865	0.53	+2.1
1,944,504	-		Dshi_1865	0.53	-0.8
1,944,504	-		Dshi_1865	0.53	+0.8
1,944,531	+		Dshi_1865	0.56	+0.7
1,944,537	+		Dshi_1865	0.57	-0.1
1,944,539	-		Dshi_1865	0.57	-0.3
1,944,539	-		Dshi_1865	0.57	-1.5
1,944,539	-		Dshi_1865	0.57	-0.5
1,944,539	-		Dshi_1865	0.57	+0.0
1,944,544	-		Dshi_1865	0.57	-0.4
1,944,546	+		Dshi_1865	0.58	-0.4
1,944,553	+		Dshi_1865	0.58	-1.2
1,944,554	-		Dshi_1865	0.59	-0.7
1,944,554	-		Dshi_1865	0.59	-1.5
1,944,557	+		Dshi_1865	0.59	+0.5
1,944,557	+		Dshi_1865	0.59	-1.0
1,944,557	+		Dshi_1865	0.59	-0.1
1,944,557	+		Dshi_1865	0.59	-0.5
1,944,557	-		Dshi_1865	0.59	-0.3
1,944,561	-		Dshi_1865	0.59	+0.5
1,944,561	-		Dshi_1865	0.59	-1.0
1,944,561	-		Dshi_1865	0.59	-0.7
1,944,563	+		Dshi_1865	0.60	+1.4
1,944,565	-		Dshi_1865	0.60	-0.6
1,944,565	-		Dshi_1865	0.60	+0.0
1,944,565	-		Dshi_1865	0.60	+1.1
1,944,567	+		Dshi_1865	0.60	-0.4
1,944,567	+		Dshi_1865	0.60	-0.8
1,944,567	+		Dshi_1865	0.60	+1.4
1,944,567	+		Dshi_1865	0.60	-0.1
1,944,577	+		Dshi_1865	0.61	-1.2
1,944,585	+		Dshi_1865	0.62	-1.9
1,944,585	-		Dshi_1865	0.62	-1.4
1,944,585	-		Dshi_1865	0.62	-0.5
1,944,585	-		Dshi_1865	0.62	-0.1
1,944,596	-		Dshi_1865	0.63	+0.7
1,944,603	+		Dshi_1865	0.64	-1.9
1,944,603	+		Dshi_1865	0.64	-0.2
1,944,604	+		Dshi_1865	0.64	+0.5
1,944,611	-		Dshi_1865	0.65	-0.8
1,944,611	-		Dshi_1865	0.65	+0.1
1,944,612	-		Dshi_1865	0.65	-0.2
1,944,616	+		Dshi_1865	0.66	+0.7
1,944,619	-		Dshi_1865	0.66	-0.5
1,944,631	+		Dshi_1865	0.67	-0.4
1,944,634	-		Dshi_1865	0.68	-0.1
1,944,636	+		Dshi_1865	0.68	-0.1
1,944,636	+		Dshi_1865	0.68	-0.6
1,944,636	+		Dshi_1865	0.68	-0.3
1,944,636	+		Dshi_1865	0.68	-0.9
1,944,636	+		Dshi_1865	0.68	-0.3
1,944,636	+		Dshi_1865	0.68	-0.6
1,944,636	+		Dshi_1865	0.68	+0.4
1,944,636	+		Dshi_1865	0.68	+0.3
1,944,636	+				+0.8
1,944,636	+		Dshi_1865	0.68	-1.2
1,944,639	-		Dshi_1865	0.68	-0.3
1,944,641	-		Dshi_1865	0.69	+1.3
1,944,644	-		Dshi_1865	0.69	-0.4
1,944,644	-		Dshi_1865	0.69	-2.0
1,944,644	-		Dshi_1865	0.69	-0.9
1,944,646	+		Dshi_1865	0.69	-0.7
1,944,654	-		Dshi_1865	0.70	+0.1
1,944,659	-		Dshi_1865	0.71	-0.1
1,944,669	-		Dshi_1865	0.72	-0.4
1,944,683	-		Dshi_1865	0.73	+0.0
1,944,689	+		Dshi_1865	0.74	-0.4
1,944,704	+		Dshi_1865	0.76	+0.2
1,944,712	-		Dshi_1865	0.77	+1.7
1,944,745	-		Dshi_1865	0.80	-0.2
1,944,750	+		Dshi_1865	0.81	+0.0
1,944,750	-		Dshi_1865	0.81	-0.1
1,944,750	-		Dshi_1865	0.81	+0.8
1,944,758	-		Dshi_1865	0.82	+0.4
1,944,759	+		Dshi_1865	0.82	+0.4
1,944,759	+		Dshi_1865	0.82	-0.4
1,944,759	-		Dshi_1865	0.82	+0.2
1,944,768	+		Dshi_1865	0.83	-0.9
1,944,768	+		Dshi_1865	0.83	+0.1
1,944,769	+		Dshi_1865	0.83	-0.3
1,944,769	+		Dshi_1865	0.83	-0.2
1,944,769	-		Dshi_1865	0.83	+0.9
1,944,779	-		Dshi_1865	0.84	-3.3
1,944,822	+		Dshi_1865	0.89	+0.4
1,944,869	-				-0.9
1,944,901	+				+0.1
1,944,917	-				-1.6
1,944,926	-				-0.3