Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34210

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,582,841	-				+1.6
3,582,841	-				+1.3
3,582,856	+				-0.4
3,582,902	-				+1.8
3,582,982	+				+1.7
3,582,984	-				+0.7
3,583,038	-				-0.3
3,583,043	+				-1.0
3,583,068	+				+0.6
3,583,103	+				-1.3
3,583,109	-				-1.4
3,583,111	-				-2.4
3,583,114	+		PGA1_c34200	0.10	+2.7
3,583,122	-		PGA1_c34200	0.11	+0.4
3,583,211	+		PGA1_c34200	0.23	-0.8
3,583,219	-		PGA1_c34200	0.24	-0.4
3,583,222	+		PGA1_c34200	0.24	-2.0
3,583,259	+		PGA1_c34200	0.29	+0.3
3,583,278	-		PGA1_c34200	0.31	+2.0
3,583,299	+		PGA1_c34200	0.34	-1.2
3,583,313	-		PGA1_c34200	0.35	-2.5
3,583,334	-		PGA1_c34200	0.38	+0.0
3,583,356	-		PGA1_c34200	0.41	+1.1
3,583,356	-		PGA1_c34200	0.41	+0.3
3,583,356	-		PGA1_c34200	0.41	+1.7
3,583,382	-		PGA1_c34200	0.44	+3.0
3,583,460	+		PGA1_c34200	0.54	+0.3
3,583,491	-		PGA1_c34200	0.58	+0.2
3,583,491	-		PGA1_c34200	0.58	-1.5
3,583,549	+		PGA1_c34200	0.66	-1.3
3,583,678	+		PGA1_c34200	0.82	-0.7
3,583,678	+		PGA1_c34200	0.82	-0.7
3,583,706	+		PGA1_c34200	0.85	-1.8
3,583,743	+				-0.4
3,583,743	+				+1.7
3,583,757	-				+0.8
3,583,853	+				+0.6
3,583,909	+				+1.3
3,583,917	-				-0.1
3,584,069	+		PGA1_c34210	0.12	-0.6
3,584,088	-		PGA1_c34210	0.13	-2.3
3,584,131	-		PGA1_c34210	0.15	+2.7
3,584,131	-		PGA1_c34210	0.15	-1.8
3,584,131	-		PGA1_c34210	0.15	+1.4
3,584,157	+		PGA1_c34210	0.17	+2.0
3,584,292	+		PGA1_c34210	0.23	-1.7
3,584,306	-		PGA1_c34210	0.24	-2.4
3,584,341	+		PGA1_c34210	0.26	+2.4
3,584,373	+		PGA1_c34210	0.27	+2.0
3,584,378	+		PGA1_c34210	0.27	-2.0
3,584,378	+		PGA1_c34210	0.27	-2.2
3,584,378	+		PGA1_c34210	0.27	+4.3
3,584,378	+		PGA1_c34210	0.27	-0.3
3,584,378	+		PGA1_c34210	0.27	+2.4
3,584,383	+		PGA1_c34210	0.28	+2.7
3,584,386	-		PGA1_c34210	0.28	-0.8
3,584,386	-		PGA1_c34210	0.28	+0.7
3,584,386	-		PGA1_c34210	0.28	+0.4
3,584,402	+		PGA1_c34210	0.29	-0.3
3,584,414	-		PGA1_c34210	0.29	+0.2
3,584,458	+		PGA1_c34210	0.31	-2.1
3,584,467	+		PGA1_c34210	0.32	-0.3
3,584,500	-		PGA1_c34210	0.33	+1.4
3,584,548	+		PGA1_c34210	0.36	-2.6
3,584,560	+		PGA1_c34210	0.36	+1.1
3,584,584	-		PGA1_c34210	0.37	-1.3
3,584,625	-		PGA1_c34210	0.39	-2.0
3,584,627	+		PGA1_c34210	0.39	+0.9
3,584,640	+		PGA1_c34210	0.40	+0.4
3,584,649	-		PGA1_c34210	0.40	-1.3
3,584,656	+		PGA1_c34210	0.41	-1.4
3,584,694	+		PGA1_c34210	0.43	+1.6
3,584,694	+		PGA1_c34210	0.43	-0.3
3,584,694	+		PGA1_c34210	0.43	-0.6
3,584,694	+		PGA1_c34210	0.43	-1.5
3,584,694	+		PGA1_c34210	0.43	+1.9
3,584,694	+		PGA1_c34210	0.43	+2.3
3,584,702	-		PGA1_c34210	0.43	-1.0
3,584,702	-		PGA1_c34210	0.43	+1.3
3,584,702	-		PGA1_c34210	0.43	-2.0
3,584,702	-		PGA1_c34210	0.43	-2.4
3,584,707	+		PGA1_c34210	0.43	+0.9
3,584,707	+		PGA1_c34210	0.43	-2.0
3,584,712	+		PGA1_c34210	0.44	+2.0
3,584,715	-		PGA1_c34210	0.44	-2.5
3,584,720	-		PGA1_c34210	0.44	+0.7
3,584,771	+		PGA1_c34210	0.46	-1.2
3,584,779	+		PGA1_c34210	0.47	+0.9
3,584,846	+		PGA1_c34210	0.50	+0.4
3,584,856	+		PGA1_c34210	0.51	+1.5
3,584,903	+		PGA1_c34210	0.53	-2.6
3,584,917	+		PGA1_c34210	0.53	+1.9
3,584,917	+		PGA1_c34210	0.53	+2.2
3,584,918	-		PGA1_c34210	0.54	+3.7
3,584,925	-		PGA1_c34210	0.54	+0.7
3,584,981	+		PGA1_c34210	0.57	-1.2
3,584,989	-		PGA1_c34210	0.57	-2.0
3,584,989	-		PGA1_c34210	0.57	+1.2
3,585,065	-		PGA1_c34210	0.61	-0.4
3,585,220	-		PGA1_c34210	0.68	+2.2
3,585,220	-		PGA1_c34210	0.68	-0.6
3,585,220	-		PGA1_c34210	0.68	+0.7
3,585,344	-		PGA1_c34210	0.74	-0.7
3,585,364	+		PGA1_c34210	0.75	-2.7
3,585,368	-		PGA1_c34210	0.75	-0.4
3,585,402	-		PGA1_c34210	0.77	-1.1
3,585,417	-		PGA1_c34210	0.78	-2.0
3,585,417	-		PGA1_c34210	0.78	+3.1
3,585,436	-		PGA1_c34210	0.79	+1.6
3,585,451	-		PGA1_c34210	0.79	+0.4
3,585,451	-		PGA1_c34210	0.79	-1.4
3,585,453	+		PGA1_c34210	0.79	+1.1
3,585,482	+		PGA1_c34210	0.81	+2.1
3,585,485	-		PGA1_c34210	0.81	-0.8
3,585,523	+		PGA1_c34210	0.83	-1.2
3,585,531	-		PGA1_c34210	0.83	+0.5
3,585,545	+		PGA1_c34210	0.84	+0.3
3,585,598	-		PGA1_c34210	0.86	+1.0
3,585,621	-		PGA1_c34210	0.88	-2.4
3,585,641	+		PGA1_c34210	0.88	-2.0
3,585,666	-		PGA1_c34210	0.90	+2.0
3,585,694	+				-1.5
3,585,696	-				-0.3
3,585,742	+				-1.7
3,585,745	-				-2.3
3,585,745	-				+2.1
3,585,747	+				+1.7
3,585,747	+				-0.9
3,585,747	+				-1.9
3,585,755	-				+0.2
3,585,800	-				+1.0
3,585,803	+				-0.4
3,585,811	-				-0.4
3,585,847	+				-1.2
3,585,941	-				-0.1
3,585,958	+				-2.1
3,585,966	-				+1.4
3,585,966	-				+0.9
3,585,988	-				-2.3
3,586,082	+		PGA1_c34220	0.11	+0.1
3,586,090	-		PGA1_c34220	0.11	+1.6
3,586,139	-		PGA1_c34220	0.16	-1.7
3,586,142	+		PGA1_c34220	0.16	+0.1
3,586,182	+		PGA1_c34220	0.19	-1.4
3,586,190	-		PGA1_c34220	0.20	+0.6
3,586,220	-		PGA1_c34220	0.23	-0.3
3,586,221	-		PGA1_c34220	0.23	+0.4
3,586,221	-		PGA1_c34220	0.23	+1.1
3,586,236	-		PGA1_c34220	0.24	-0.8
3,586,315	+		PGA1_c34220	0.31	-1.7
3,586,315	-		PGA1_c34220	0.31	+1.5
3,586,323	-		PGA1_c34220	0.31	-1.0
3,586,360	-		PGA1_c34220	0.35	+0.5
3,586,360	-		PGA1_c34220	0.35	+1.9
3,586,362	+		PGA1_c34220	0.35	-1.4
3,586,362	+		PGA1_c34220	0.35	+1.6
3,586,381	-		PGA1_c34220	0.36	-2.1
3,586,388	+		PGA1_c34220	0.37	-1.2
3,586,388	+		PGA1_c34220	0.37	-2.0
3,586,401	-		PGA1_c34220	0.38	-1.9
3,586,407	-		PGA1_c34220	0.39	-1.9
3,586,409	+		PGA1_c34220	0.39	+0.5
3,586,417	-		PGA1_c34220	0.40	+2.7
3,586,480	+		PGA1_c34220	0.45	-1.2
3,586,485	+		PGA1_c34220	0.45	+1.1
3,586,486	+		PGA1_c34220	0.45	+0.5
3,586,491	+		PGA1_c34220	0.46	+0.9
3,586,494	-		PGA1_c34220	0.46	-0.3
3,586,501	-		PGA1_c34220	0.47	+1.4
3,586,545	-		PGA1_c34220	0.51	-0.6
3,586,591	+		PGA1_c34220	0.54	-0.6
3,586,599	-		PGA1_c34220	0.55	+1.3
3,586,599	-		PGA1_c34220	0.55	-1.9
3,586,658	+		PGA1_c34220	0.60	+1.3
3,586,666	-		PGA1_c34220	0.61	-0.3
3,586,702	+		PGA1_c34220	0.64	-1.3
3,586,710	-		PGA1_c34220	0.65	+1.2
3,586,782	+		PGA1_c34220	0.71	-1.0
3,586,783	-		PGA1_c34220	0.71	-0.6
3,586,816	-		PGA1_c34220	0.74	+0.9
3,586,851	+		PGA1_c34220	0.77	+1.1
3,586,851	+		PGA1_c34220	0.77	-2.3
3,586,859	-		PGA1_c34220	0.77	+0.3
3,586,862	+		PGA1_c34220	0.78	-0.3