Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33630

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,522,537	+		PGA1_c33620	0.40	+1.1
3,522,557	-		PGA1_c33620	0.41	+2.1
3,522,608	+		PGA1_c33620	0.44	-1.2
3,522,782	+		PGA1_c33620	0.55	-0.6
3,522,810	+		PGA1_c33620	0.56	+2.1
3,522,810	+		PGA1_c33620	0.56	+1.4
3,522,810	+		PGA1_c33620	0.56	-0.2
3,522,810	+		PGA1_c33620	0.56	+0.3
3,522,818	-		PGA1_c33620	0.57	-2.7
3,522,821	+		PGA1_c33620	0.57	+0.0
3,522,831	+		PGA1_c33620	0.58	-2.1
3,522,831	+		PGA1_c33620	0.58	+1.8
3,522,831	+		PGA1_c33620	0.58	+1.2
3,522,831	+		PGA1_c33620	0.58	+0.1
3,522,831	+		PGA1_c33620	0.58	-1.5
3,522,831	+		PGA1_c33620	0.58	+0.8
3,522,831	+		PGA1_c33620	0.58	+0.1
3,522,831	+		PGA1_c33620	0.58	-0.4
3,522,831	+		PGA1_c33620	0.58	-0.9
3,522,831	+		PGA1_c33620	0.58	-1.9
3,522,839	-		PGA1_c33620	0.58	-1.8
3,522,839	-		PGA1_c33620	0.58	-0.2
3,522,839	-		PGA1_c33620	0.58	-1.1
3,522,839	-		PGA1_c33620	0.58	+3.0
3,522,839	-		PGA1_c33620	0.58	+1.4
3,522,839	-		PGA1_c33620	0.58	-0.2
3,522,839	-		PGA1_c33620	0.58	-2.1
3,522,839	-		PGA1_c33620	0.58	+1.5
3,522,839	-		PGA1_c33620	0.58	-0.6
3,522,839	-		PGA1_c33620	0.58	-2.2
3,522,839	-		PGA1_c33620	0.58	+2.3
3,522,839	-		PGA1_c33620	0.58	-1.1
3,522,839	-		PGA1_c33620	0.58	-1.3
3,522,839	-		PGA1_c33620	0.58	-0.2
3,522,915	-		PGA1_c33620	0.63	-0.1
3,522,956	+		PGA1_c33620	0.65	+1.4
3,523,001	+		PGA1_c33620	0.68	-0.8
3,523,001	+		PGA1_c33620	0.68	-1.8
3,523,001	+		PGA1_c33620	0.68	-1.8
3,523,009	-		PGA1_c33620	0.69	-1.9
3,523,011	+		PGA1_c33620	0.69	+0.4
3,523,038	-		PGA1_c33620	0.71	-1.6
3,523,150	-		PGA1_c33620	0.77	+1.4
3,523,245	+		PGA1_c33620	0.83	+1.8
3,523,257	-		PGA1_c33620	0.84	+2.4
3,523,257	-		PGA1_c33620	0.84	-2.3
3,523,257	-		PGA1_c33620	0.84	-1.2
3,523,274	-		PGA1_c33620	0.85	+0.6
3,523,284	-		PGA1_c33620	0.86	-1.6
3,523,372	-				+0.9
3,523,383	+				+0.2
3,523,383	+				+2.0
3,523,391	-				+0.8
3,523,401	+				-0.7
3,523,420	+				+1.8
3,523,428	-				+0.9
3,523,460	-				+1.2
3,523,624	-		PGA1_c33630	0.12	+0.6
3,523,646	+		PGA1_c33630	0.14	-0.2
3,523,646	+		PGA1_c33630	0.14	-1.9
3,523,646	+		PGA1_c33630	0.14	-1.8
3,523,646	+		PGA1_c33630	0.14	-1.7
3,523,646	+		PGA1_c33630	0.14	-0.7
3,523,648	+		PGA1_c33630	0.14	+1.5
3,523,649	-		PGA1_c33630	0.14	+2.8
3,523,654	-		PGA1_c33630	0.15	-1.9
3,523,655	-		PGA1_c33630	0.15	-1.4
3,523,656	-		PGA1_c33630	0.15	+0.6
3,523,689	+		PGA1_c33630	0.18	-1.8
3,523,689	+		PGA1_c33630	0.18	-0.9
3,523,697	-		PGA1_c33630	0.19	-0.4
3,523,697	-		PGA1_c33630	0.19	-0.7
3,523,697	-		PGA1_c33630	0.19	-0.2
3,523,701	+		PGA1_c33630	0.19	+0.9
3,523,709	-		PGA1_c33630	0.20	-0.9
3,523,722	+		PGA1_c33630	0.21	+0.9
3,523,728	+		PGA1_c33630	0.22	+0.8
3,523,759	+		PGA1_c33630	0.25	+0.3
3,523,759	+		PGA1_c33630	0.25	-0.2
3,523,761	-		PGA1_c33630	0.25	-0.8
3,523,767	+		PGA1_c33630	0.26	-0.6
3,523,792	+		PGA1_c33630	0.28	+1.6
3,523,863	-		PGA1_c33630	0.35	+1.2
3,523,917	+		PGA1_c33630	0.40	+0.7
3,523,938	+		PGA1_c33630	0.42	-3.0
3,524,091	-		PGA1_c33630	0.57	+2.1
3,524,120	+		PGA1_c33630	0.60	+0.1
3,524,120	+		PGA1_c33630	0.60	-1.4
3,524,124	+		PGA1_c33630	0.60	+3.4
3,524,128	-		PGA1_c33630	0.60	-1.4
3,524,168	+		PGA1_c33630	0.64	+0.4
3,524,176	+		PGA1_c33630	0.65	-1.6
3,524,176	-		PGA1_c33630	0.65	-1.2
3,524,186	+		PGA1_c33630	0.66	-2.1
3,524,186	+		PGA1_c33630	0.66	-0.5
3,524,216	-		PGA1_c33630	0.69	+0.5
3,524,239	-		PGA1_c33630	0.71	-2.1
3,524,242	+		PGA1_c33630	0.71	+1.2
3,524,297	-		PGA1_c33630	0.77	+0.8
3,524,322	-		PGA1_c33630	0.79	+0.3
3,524,327	-		PGA1_c33630	0.80	+1.7
3,524,327	-		PGA1_c33630	0.80	+1.2
3,524,327	-		PGA1_c33630	0.80	-2.3
3,524,327	-		PGA1_c33630	0.80	-1.6
3,524,339	-		PGA1_c33630	0.81	-1.2
3,524,365	-		PGA1_c33630	0.83	+0.3
3,524,374	+		PGA1_c33630	0.84	+3.4
3,524,392	-		PGA1_c33630	0.86	+1.7
3,524,402	+		PGA1_c33630	0.87	+0.8
3,524,402	+		PGA1_c33630	0.87	-1.4
3,524,455	-				+0.9
3,524,470	+				-0.1
3,524,478	-				-1.4
3,524,478	-				+1.1
3,524,488	-				-0.4
3,524,522	-				-0.6
3,524,566	-				-1.4
3,524,568	-				-0.4
3,524,577	-				-1.1
3,524,579	-				-1.5
3,524,650	+				-1.1
3,524,660	+				-0.6
3,524,668	-				-1.8
3,524,700	-				+1.5
3,524,710	-				-0.9
3,524,717	+				+2.5
3,524,762	+		PGA1_c33640	0.10	-1.2
3,524,773	+		PGA1_c33640	0.11	+1.6
3,524,822	+		PGA1_c33640	0.13	+2.8
3,524,835	+		PGA1_c33640	0.14	+1.0
3,524,896	-		PGA1_c33640	0.17	+1.1
3,524,897	+		PGA1_c33640	0.17	-2.2
3,524,901	-		PGA1_c33640	0.17	+1.5
3,524,901	-		PGA1_c33640	0.17	-3.1
3,524,905	-		PGA1_c33640	0.17	+0.2
3,524,914	+		PGA1_c33640	0.17	+2.3
3,524,921	-		PGA1_c33640	0.18	+0.8
3,524,931	-		PGA1_c33640	0.18	-0.4
3,524,936	+		PGA1_c33640	0.18	-1.6
3,525,003	+		PGA1_c33640	0.21	+0.9
3,525,067	-		PGA1_c33640	0.24	-0.6
3,525,087	+		PGA1_c33640	0.25	+0.8
3,525,122	+		PGA1_c33640	0.27	+1.5
3,525,130	-		PGA1_c33640	0.27	-0.0
3,525,207	-		PGA1_c33640	0.31	+0.1
3,525,214	+		PGA1_c33640	0.31	+1.8
3,525,221	-		PGA1_c33640	0.31	-0.1
3,525,222	+		PGA1_c33640	0.31	-0.6
3,525,222	-		PGA1_c33640	0.31	+0.0
3,525,222	-		PGA1_c33640	0.31	-0.9
3,525,280	-		PGA1_c33640	0.34	-1.8
3,525,280	-		PGA1_c33640	0.34	+2.4
3,525,290	+		PGA1_c33640	0.35	-1.2
3,525,335	+		PGA1_c33640	0.37	-0.7
3,525,338	-		PGA1_c33640	0.37	-1.5
3,525,363	+		PGA1_c33640	0.38	+2.6
3,525,404	-		PGA1_c33640	0.40	-2.1
3,525,404	-		PGA1_c33640	0.40	+0.2
3,525,409	-		PGA1_c33640	0.40	+0.7
3,525,430	+		PGA1_c33640	0.41	-0.4
3,525,433	-		PGA1_c33640	0.41	+3.0
3,525,438	+		PGA1_c33640	0.41	-0.4
3,525,438	+		PGA1_c33640	0.41	+0.7
3,525,438	-		PGA1_c33640	0.41	+2.2
3,525,443	+		PGA1_c33640	0.42	+0.3
3,525,451	-		PGA1_c33640	0.42	-1.2
3,525,458	+		PGA1_c33640	0.42	-1.2
3,525,474	+		PGA1_c33640	0.43	-2.2
3,525,506	-		PGA1_c33640	0.44	-1.1