Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33210

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,479,011	-		PGA1_c33190	0.12	+0.8
3,479,036	+		PGA1_c33190	0.20	+2.9
3,479,041	+		PGA1_c33190	0.21	+1.1
3,479,101	+		PGA1_c33190	0.39	-0.9
3,479,101	+		PGA1_c33190	0.39	+1.2
3,479,101	+		PGA1_c33190	0.39	-1.5
3,479,109	-		PGA1_c33190	0.41	+1.6
3,479,109	-		PGA1_c33190	0.41	+0.9
3,479,109	-		PGA1_c33190	0.41	+1.6
3,479,188	+		PGA1_c33190	0.64	+1.3
3,479,389	-				-1.8
3,479,405	-		PGA1_c33200	0.13	+0.9
3,479,425	+		PGA1_c33200	0.17	+0.8
3,479,425	+		PGA1_c33200	0.17	+2.4
3,479,425	+		PGA1_c33200	0.17	+1.8
3,479,473	-		PGA1_c33200	0.28	+0.3
3,479,482	-		PGA1_c33200	0.30	+3.7
3,479,509	+		PGA1_c33200	0.36	+1.9
3,479,510	+		PGA1_c33200	0.36	-0.2
3,479,518	-		PGA1_c33200	0.38	-0.5
3,479,518	-		PGA1_c33200	0.38	+1.0
3,479,570	-		PGA1_c33200	0.50	+1.1
3,479,620	+		PGA1_c33200	0.61	-2.0
3,479,626	+		PGA1_c33200	0.62	+0.8
3,479,629	-		PGA1_c33200	0.63	+0.2
3,479,631	+		PGA1_c33200	0.63	-0.8
3,479,675	+		PGA1_c33200	0.73	-2.8
3,479,694	+		PGA1_c33200	0.77	+2.4
3,479,714	+		PGA1_c33200	0.82	+4.2
3,479,736	-		PGA1_c33200	0.87	+0.6
3,479,747	+		PGA1_c33200	0.89	+0.7
3,479,796	-				-2.9
3,479,796	-				-1.6
3,479,807	+				+1.2
3,479,807	+				+1.1
3,479,815	-				+1.2
3,479,817	-				-2.4
3,479,863	+				+1.9
3,479,916	+				-1.2
3,479,916	+				+2.2
3,479,966	-				+2.3
3,479,966	-				-3.0
3,479,966	-				-0.6
3,480,037	+				+1.3
3,480,068	+				-2.7
3,480,068	+				+1.3
3,480,076	-				+2.1
3,480,076	-				-2.7
3,480,159	-				-0.1
3,480,213	-		PGA1_c33210	0.13	-1.4
3,480,278	+		PGA1_c33210	0.17	-0.9
3,480,313	+		PGA1_c33210	0.19	-1.8
3,480,313	+		PGA1_c33210	0.19	-0.6
3,480,313	+		PGA1_c33210	0.19	-0.5
3,480,313	+		PGA1_c33210	0.19	-0.9
3,480,313	+		PGA1_c33210	0.19	+1.9
3,480,313	+		PGA1_c33210	0.19	-1.1
3,480,313	+		PGA1_c33210	0.19	+0.0
3,480,313	+		PGA1_c33210	0.19	-3.8
3,480,313	+		PGA1_c33210	0.19	+0.6
3,480,321	-		PGA1_c33210	0.20	-1.1
3,480,321	-		PGA1_c33210	0.20	+1.7
3,480,380	-		PGA1_c33210	0.24	-0.8
3,480,415	+		PGA1_c33210	0.26	+1.8
3,480,446	+		PGA1_c33210	0.28	-2.5
3,480,493	+		PGA1_c33210	0.31	-1.6
3,480,501	-		PGA1_c33210	0.31	+2.6
3,480,501	-		PGA1_c33210	0.31	-1.9
3,480,501	-		PGA1_c33210	0.31	+0.8
3,480,501	-		PGA1_c33210	0.31	+1.6
3,480,501	-		PGA1_c33210	0.31	-2.6
3,480,501	-		PGA1_c33210	0.31	-0.4
3,480,563	+		PGA1_c33210	0.35	-1.4
3,480,563	+		PGA1_c33210	0.35	-0.9
3,480,571	-		PGA1_c33210	0.36	-1.9
3,480,571	-		PGA1_c33210	0.36	-2.8
3,480,639	+		PGA1_c33210	0.40	-2.2
3,480,647	-		PGA1_c33210	0.41	-0.3
3,480,647	-		PGA1_c33210	0.41	-2.6
3,480,647	-		PGA1_c33210	0.41	-1.6
3,480,647	-		PGA1_c33210	0.41	+0.4
3,480,680	-		PGA1_c33210	0.43	-1.8
3,480,699	+		PGA1_c33210	0.44	-0.3
3,480,699	+		PGA1_c33210	0.44	-2.8
3,480,699	+		PGA1_c33210	0.44	-1.6
3,480,699	+		PGA1_c33210	0.44	+0.5
3,480,707	-		PGA1_c33210	0.44	-0.9
3,480,707	-		PGA1_c33210	0.44	-0.1
3,480,709	+		PGA1_c33210	0.45	+1.2
3,480,718	-		PGA1_c33210	0.45	+1.9
3,480,734	-		PGA1_c33210	0.46	+1.1
3,480,785	+		PGA1_c33210	0.49	-1.3
3,480,785	+		PGA1_c33210	0.49	-0.9
3,480,842	-		PGA1_c33210	0.53	-2.0
3,480,853	-		PGA1_c33210	0.54	+1.6
3,480,855	+		PGA1_c33210	0.54	-1.6
3,480,863	-		PGA1_c33210	0.54	-0.3
3,480,863	-		PGA1_c33210	0.54	-0.5
3,480,863	-		PGA1_c33210	0.54	+2.1
3,480,885	+		PGA1_c33210	0.56	+1.4
3,480,885	+		PGA1_c33210	0.56	-1.3
3,480,890	+		PGA1_c33210	0.56	-0.0
3,480,893	-		PGA1_c33210	0.56	-2.0
3,480,893	-		PGA1_c33210	0.56	-1.8
3,481,013	+		PGA1_c33210	0.64	-1.4
3,481,013	+		PGA1_c33210	0.64	-3.1
3,481,013	+		PGA1_c33210	0.64	-1.4
3,481,015	+		PGA1_c33210	0.64	-1.0
3,481,021	-		PGA1_c33210	0.64	-0.6
3,481,021	-		PGA1_c33210	0.64	+0.9
3,481,021	-		PGA1_c33210	0.64	+3.1
3,481,021	-		PGA1_c33210	0.64	-1.0
3,481,021	-		PGA1_c33210	0.64	+0.7
3,481,021	-		PGA1_c33210	0.64	-2.1
3,481,071	+		PGA1_c33210	0.68	+0.4
3,481,082	-		PGA1_c33210	0.68	+0.1
3,481,082	-		PGA1_c33210	0.68	-0.1
3,481,158	+		PGA1_c33210	0.73	+1.7
3,481,166	-		PGA1_c33210	0.74	-2.5
3,481,178	+		PGA1_c33210	0.74	+1.0
3,481,178	+		PGA1_c33210	0.74	+1.8
3,481,179	-		PGA1_c33210	0.74	-1.9
3,481,188	+		PGA1_c33210	0.75	+2.3
3,481,194	+		PGA1_c33210	0.75	+1.9
3,481,233	-		PGA1_c33210	0.78	+1.8
3,481,249	-		PGA1_c33210	0.79	+1.5
3,481,270	+		PGA1_c33210	0.80	-0.1
3,481,305	+		PGA1_c33210	0.82	+1.0
3,481,386	-		PGA1_c33210	0.88	+2.9
3,481,393	-		PGA1_c33210	0.88	+1.7
3,481,404	+		PGA1_c33210	0.89	+0.9
3,481,404	+		PGA1_c33210	0.89	-1.3
3,481,412	-		PGA1_c33210	0.89	-1.0
3,481,412	-		PGA1_c33210	0.89	-1.0
3,481,420	+		PGA1_c33210	0.90	-1.9
3,481,421	+		PGA1_c33210	0.90	+1.1
3,481,428	-				-1.0
3,481,439	+				+1.4
3,481,507	+				-1.5
3,481,507	+				+2.4
3,481,575	+				-1.7
3,481,575	+				-2.3
3,481,583	-				-0.8
3,481,593	-				-0.6
3,481,631	+				+1.3
3,481,665	+				+2.7
3,481,672	+				-2.3
3,481,677	+				-1.0
3,481,689	+				+0.1
3,481,702	-				-1.5
3,481,744	-		PGA1_c33220	0.21	+1.6
3,481,749	-		PGA1_c33220	0.23	-0.3
3,481,792	-		PGA1_c33220	0.36	-2.9
3,481,799	-		PGA1_c33220	0.38	-2.2
3,481,804	+		PGA1_c33220	0.40	+0.4
3,481,888	-		PGA1_c33220	0.65	-1.5
3,481,888	-		PGA1_c33220	0.65	+2.6
3,481,897	+		PGA1_c33220	0.68	-0.4
3,481,905	-		PGA1_c33220	0.71	-1.5
3,481,965	-		PGA1_c33220	0.89	+1.6
3,482,039	+				-1.8
3,482,071	-				-0.6
3,482,083	+				+0.4
3,482,094	-				-0.7
3,482,123	+				+0.8
3,482,133	+				+2.0
3,482,133	+				+0.8
3,482,168	+				-2.5
3,482,168	+				-1.9
3,482,168	+				-0.3
3,482,168	+				-1.1
3,482,168	+				-0.7
3,482,176	-				-1.4
3,482,176	-				+1.7
3,482,176	-				+1.6
3,482,176	-				+1.4
3,482,176	-				+0.8
3,482,178	+				+0.9
3,482,186	+				+2.4
3,482,381	+		PGA1_c33230	0.14	-0.5
3,482,385	+		PGA1_c33230	0.15	+0.4
3,482,385	+		PGA1_c33230	0.15	+1.5
3,482,385	+		PGA1_c33230	0.15	-1.6
3,482,393	-		PGA1_c33230	0.16	+1.1
3,482,402	+		PGA1_c33230	0.17	-0.6
3,482,408	-		PGA1_c33230	0.17	+2.7
3,482,415	+		PGA1_c33230	0.18	+1.7
3,482,431	+		PGA1_c33230	0.20	-0.1
3,482,437	+		PGA1_c33230	0.20	+0.6
3,482,491	+		PGA1_c33230	0.26	-0.3
3,482,513	+		PGA1_c33230	0.29	-1.1
3,482,522	+		PGA1_c33230	0.29	+1.7
3,482,547	+		PGA1_c33230	0.32	+2.8
3,482,560	-		PGA1_c33230	0.34	+2.4