Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31075

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,247,030	+		PGA1_c31070	0.31	-2.4
3,247,038	-		PGA1_c31070	0.31	-1.2
3,247,043	-		PGA1_c31070	0.32	-1.5
3,247,072	-		PGA1_c31070	0.34	+2.1
3,247,082	-		PGA1_c31070	0.34	+1.2
3,247,108	+		PGA1_c31070	0.36	-2.8
3,247,250	+		PGA1_c31070	0.47	+0.3
3,247,256	+		PGA1_c31070	0.47	+0.6
3,247,256	+		PGA1_c31070	0.47	-1.4
3,247,256	+		PGA1_c31070	0.47	-1.3
3,247,256	+		PGA1_c31070	0.47	-0.4
3,247,256	+		PGA1_c31070	0.47	+0.9
3,247,256	+		PGA1_c31070	0.47	-1.8
3,247,256	+		PGA1_c31070	0.47	+3.4
3,247,256	+		PGA1_c31070	0.47	-1.8
3,247,264	-		PGA1_c31070	0.48	-1.8
3,247,264	-		PGA1_c31070	0.48	+0.3
3,247,264	-		PGA1_c31070	0.48	+1.0
3,247,264	-		PGA1_c31070	0.48	-1.0
3,247,306	-		PGA1_c31070	0.51	-0.5
3,247,399	+		PGA1_c31070	0.57	-0.2
3,247,400	+		PGA1_c31070	0.57	-0.7
3,247,413	-		PGA1_c31070	0.58	-1.1
3,247,422	+		PGA1_c31070	0.59	+1.1
3,247,430	-		PGA1_c31070	0.59	-0.4
3,247,463	+		PGA1_c31070	0.62	+1.0
3,247,471	-		PGA1_c31070	0.62	+2.3
3,247,497	-		PGA1_c31070	0.64	-1.5
3,247,499	-		PGA1_c31070	0.64	+0.8
3,247,505	-		PGA1_c31070	0.65	-2.0
3,247,538	-		PGA1_c31070	0.67	-2.0
3,247,580	-		PGA1_c31070	0.70	+2.3
3,247,605	-		PGA1_c31070	0.72	+1.8
3,247,635	-		PGA1_c31070	0.74	+0.6
3,247,655	+		PGA1_c31070	0.76	-0.7
3,247,716	-		PGA1_c31070	0.80	+1.1
3,247,739	-		PGA1_c31070	0.82	+1.3
3,247,739	-		PGA1_c31070	0.82	-0.7
3,247,758	+		PGA1_c31070	0.83	+0.3
3,247,758	+		PGA1_c31070	0.83	-0.5
3,247,834	-		PGA1_c31070	0.88	+1.1
3,247,901	-				-0.2
3,247,955	+				+4.2
3,247,991	+				-0.8
3,247,999	-				+0.6
3,247,999	-				-1.4
3,248,036	-		PGA1_c31075	0.10	+1.5
3,248,036	-		PGA1_c31075	0.10	+1.8
3,248,036	-		PGA1_c31075	0.10	+0.3
3,248,084	-		PGA1_c31075	0.23	+2.0
3,248,097	+		PGA1_c31075	0.27	-0.4
3,248,097	+		PGA1_c31075	0.27	-2.8
3,248,097	+		PGA1_c31075	0.27	+1.6
3,248,105	-		PGA1_c31075	0.29	-1.0
3,248,107	+		PGA1_c31075	0.29	-0.4
3,248,109	-		PGA1_c31075	0.30	-0.1
3,248,120	-		PGA1_c31075	0.33	-2.6
3,248,147	+		PGA1_c31075	0.40	+0.3
3,248,147	+		PGA1_c31075	0.40	-0.8
3,248,147	+		PGA1_c31075	0.40	-0.6
3,248,147	+		PGA1_c31075	0.40	-1.1
3,248,147	+		PGA1_c31075	0.40	-1.3
3,248,147	+		PGA1_c31075	0.40	+1.1
3,248,147	+		PGA1_c31075	0.40	+2.6
3,248,148	+		PGA1_c31075	0.40	-1.1
3,248,155	-		PGA1_c31075	0.42	+0.3
3,248,155	-		PGA1_c31075	0.42	+2.1
3,248,155	-		PGA1_c31075	0.42	-1.7
3,248,155	-		PGA1_c31075	0.42	+2.0
3,248,155	-		PGA1_c31075	0.42	+4.6
3,248,155	-		PGA1_c31075	0.42	-0.1
3,248,155	-		PGA1_c31075	0.42	+0.0
3,248,160	-		PGA1_c31075	0.43	-1.8
3,248,165	-		PGA1_c31075	0.45	-0.2
3,248,167	-		PGA1_c31075	0.45	-1.3
3,248,191	+		PGA1_c31075	0.52	-2.3
3,248,196	+		PGA1_c31075	0.53	-2.4
3,248,196	+		PGA1_c31075	0.53	+1.7
3,248,196	+		PGA1_c31075	0.53	+1.3
3,248,196	+		PGA1_c31075	0.53	+1.2
3,248,196	+		PGA1_c31075	0.53	+1.0
3,248,196	+		PGA1_c31075	0.53	+1.4
3,248,196	+		PGA1_c31075	0.53	-1.5
3,248,196	+		PGA1_c31075	0.53	+0.1
3,248,196	+		PGA1_c31075	0.53	+2.4
3,248,196	+		PGA1_c31075	0.53	-0.3
3,248,196	+		PGA1_c31075	0.53	+3.0
3,248,196	+		PGA1_c31075	0.53	+0.6
3,248,196	+		PGA1_c31075	0.53	-0.3
3,248,196	+		PGA1_c31075	0.53	+2.8
3,248,196	+		PGA1_c31075	0.53	+0.8
3,248,204	-		PGA1_c31075	0.55	+0.8
3,248,204	-		PGA1_c31075	0.55	-1.0
3,248,204	-		PGA1_c31075	0.55	-1.2
3,248,204	-		PGA1_c31075	0.55	+0.9
3,248,204	-		PGA1_c31075	0.55	+0.3
3,248,204	-		PGA1_c31075	0.55	+0.3
3,248,204	-		PGA1_c31075	0.55	-0.9
3,248,204	-		PGA1_c31075	0.55	+1.7
3,248,204	-		PGA1_c31075	0.55	-0.7
3,248,204	-		PGA1_c31075	0.55	+1.7
3,248,204	-		PGA1_c31075	0.55	+0.3
3,248,204	-		PGA1_c31075	0.55	+0.5
3,248,204	-		PGA1_c31075	0.55	+0.6
3,248,204	-		PGA1_c31075	0.55	+0.7
3,248,204	-		PGA1_c31075	0.55	+1.3
3,248,204	-		PGA1_c31075	0.55	+1.6
3,248,204	-		PGA1_c31075	0.55	-0.4
3,248,204	-		PGA1_c31075	0.55	-1.1
3,248,247	+		PGA1_c31075	0.67	+1.5
3,248,249	+		PGA1_c31075	0.67	-2.6
3,248,253	-		PGA1_c31075	0.68	+2.6
3,248,253	-		PGA1_c31075	0.68	-1.0
3,248,253	-		PGA1_c31075	0.68	+2.5
3,248,258	-		PGA1_c31075	0.70	-0.8
3,248,258	-		PGA1_c31075	0.70	+3.1
3,248,291	+		PGA1_c31075	0.78	+1.0
3,248,293	+		PGA1_c31075	0.79	-0.3
3,248,323	+		PGA1_c31075	0.87	-1.7
3,248,323	+		PGA1_c31075	0.87	-0.8
3,248,323	+		PGA1_c31075	0.87	-0.2
3,248,323	+		PGA1_c31075	0.87	+1.9
3,248,325	+		PGA1_c31075	0.87	-1.3
3,248,331	+		PGA1_c31075	0.89	-1.9
3,248,331	-		PGA1_c31075	0.89	-0.2
3,248,333	+		PGA1_c31075	0.90	-0.8
3,248,349	-				+1.5
3,248,366	+				-2.5
3,248,377	+				-2.8
3,248,383	-				+2.3
3,248,420	+				+1.3
3,248,420	+				-1.7
3,248,420	+				-0.8
3,248,420	+				-1.4
3,248,428	-				-3.1
3,248,428	-				-1.1
3,248,428	-				+0.3
3,248,428	-				+1.5
3,248,428	-				+1.6
3,248,430	+				-2.1
3,248,430	+				+1.4
3,248,430	+				+1.0
3,248,430	+				-0.2
3,248,438	-				+3.0
3,248,438	-				-0.1
3,248,438	-				-1.4
3,248,438	-				+1.2
3,248,443	-				+2.6
3,248,445	+				+0.2
3,248,451	-				-0.4
3,248,451	-				-1.0
3,248,463	-				+0.3
3,248,549	+				-1.0
3,248,549	+				+3.8
3,248,549	+				+0.7
3,248,557	-				+1.6
3,248,557	-				-2.2
3,248,557	-				-1.8
3,248,557	-				+3.5
3,248,557	-				-1.3
3,248,557	-				+0.6
3,248,591	+				+1.2
3,248,591	+				+1.4
3,248,591	+				-1.5
3,248,591	+				-0.7
3,248,599	+				+0.8
3,248,599	-				+0.5
3,248,599	-				+1.6
3,248,601	+				-2.8
3,248,607	+				-0.4
3,248,607	-				+2.1
3,248,609	-				+1.8
3,248,646	+				+1.0
3,248,654	-				-0.4
3,248,654	-				+1.3
3,248,654	-				+0.9
3,248,654	-				-0.4
3,248,673	+				+0.9
3,248,680	-				-0.4
3,248,705	+				-0.5
3,248,705	+				+0.7
3,248,705	+				+2.2
3,248,705	+				+0.1
3,248,711	+				-2.2
3,248,711	+				-1.0
3,248,711	-				+1.5
3,248,719	-				-1.7
3,248,721	+				-0.0
3,248,735	+				-1.5
3,248,740	+				-1.5
3,248,741	-				-0.8
3,248,743	-				-1.1
3,248,745	+				-1.2
3,248,753	-				-2.1
3,248,755	+				-2.9
3,248,755	+				+3.3
3,248,755	+				+0.0
3,248,763	-				+0.6
3,248,763	-				+1.3
3,248,763	-				+1.5
3,248,791	+				+1.1
3,248,791	+				-1.2
3,248,791	+				-1.7
3,248,793	+				-0.8
3,248,799	+				+1.5
3,248,799	-				-1.3
3,248,799	-				+0.6
3,248,799	-				-2.0
3,248,799	-				+2.7
3,248,799	-				+1.2
3,248,801	-				-0.8
3,248,801	-				+0.8
3,248,825	+				+1.3
3,248,832	+				-0.6
3,248,835	-		PGA1_c31080	0.10	+1.4
3,248,840	-		PGA1_c31080	0.11	+0.9
3,248,840	-		PGA1_c31080	0.11	+2.2
3,248,840	-		PGA1_c31080	0.11	+0.5
3,248,844	+		PGA1_c31080	0.12	-1.1
3,248,844	+		PGA1_c31080	0.12	-1.5
3,248,852	-		PGA1_c31080	0.13	+0.6
3,248,852	-		PGA1_c31080	0.13	+0.6
3,248,875	-		PGA1_c31080	0.16	+1.1
3,248,875	-		PGA1_c31080	0.16	-2.8
3,248,894	+		PGA1_c31080	0.19	-0.3
3,248,924	+		PGA1_c31080	0.23	-0.3
3,248,932	-		PGA1_c31080	0.25	+0.2
3,248,934	-		PGA1_c31080	0.25	-0.4
3,248,943	+		PGA1_c31080	0.26	-0.1
3,248,963	+		PGA1_c31080	0.29	-0.2
3,248,997	-		PGA1_c31080	0.34	-1.3
3,248,999	+		PGA1_c31080	0.34	+0.3
3,249,029	+		PGA1_c31080	0.39	-1.6
3,249,030	-		PGA1_c31080	0.39	-0.7
3,249,037	+		PGA1_c31080	0.40	-1.0
3,249,037	+		PGA1_c31080	0.40	-0.2
3,249,037	+		PGA1_c31080	0.40	+1.8
3,249,040	-		PGA1_c31080	0.40	+0.9
3,249,045	-		PGA1_c31080	0.41	-2.0
3,249,052	-		PGA1_c31080	0.42	-2.7
3,249,060	-		PGA1_c31080	0.43	-1.8
3,249,062	+		PGA1_c31080	0.44	-1.4
3,249,062	-		PGA1_c31080	0.44	-0.7
3,249,062	-		PGA1_c31080	0.44	+0.4
3,249,065	-		PGA1_c31080	0.44	-1.1
3,249,070	-		PGA1_c31080	0.45	-0.2
3,249,070	-		PGA1_c31080	0.45	+2.6
3,249,070	-		PGA1_c31080	0.45	+1.2
3,249,096	-		PGA1_c31080	0.49	-1.3
3,249,147	-		PGA1_c31080	0.56	+1.4
3,249,154	+		PGA1_c31080	0.57	-1.8
3,249,174	+		PGA1_c31080	0.60	+0.5
3,249,181	-		PGA1_c31080	0.61	-1.9
3,249,181	-		PGA1_c31080	0.61	+2.8
3,249,181	-		PGA1_c31080	0.61	-1.9
3,249,182	-		PGA1_c31080	0.61	+3.6
3,249,182	-		PGA1_c31080	0.61	+2.4
3,249,194	+		PGA1_c31080	0.63	-1.8
3,249,194	+		PGA1_c31080	0.63	+0.9
3,249,282	-		PGA1_c31080	0.76	-0.5
3,249,282	-		PGA1_c31080	0.76	-2.0
3,249,289	+		PGA1_c31080	0.77	-1.0
3,249,297	-		PGA1_c31080	0.78	+4.8
3,249,307	-		PGA1_c31080	0.79	+1.9
3,249,319	-		PGA1_c31080	0.81	+0.5
3,249,319	-		PGA1_c31080	0.81	-2.0
3,249,344	-		PGA1_c31080	0.85	+1.5
3,249,356	+		PGA1_c31080	0.87	-0.2
3,249,366	+		PGA1_c31080	0.88	-1.1