Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25840

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,693,328	-		PGA1_c25810	0.90	+0.1
2,693,328	-		PGA1_c25810	0.90	+0.5
2,693,367	+				-1.8
2,693,446	+				-1.6
2,693,447	+				-1.6
2,693,454	-				+0.5
2,693,463	+				+0.6
2,693,471	-				-2.7
2,693,584	-				-1.6
2,693,585	+				-1.2
2,693,605	+				-0.7
2,693,649	+				-0.2
2,693,702	-				+2.7
2,693,775	-		PGA1_c25820	0.21	+2.3
2,693,790	+		PGA1_c25820	0.24	-1.6
2,693,917	+		PGA1_c25820	0.51	+0.7
2,693,917	+		PGA1_c25820	0.51	-0.0
2,693,917	+		PGA1_c25820	0.51	-0.4
2,693,925	-		PGA1_c25820	0.53	-1.1
2,693,925	-		PGA1_c25820	0.53	-0.3
2,693,925	-		PGA1_c25820	0.53	+1.9
2,693,925	-		PGA1_c25820	0.53	+1.6
2,693,925	-		PGA1_c25820	0.53	-0.3
2,693,981	-		PGA1_c25820	0.64	+4.5
2,693,981	-		PGA1_c25820	0.64	-1.3
2,693,981	-		PGA1_c25820	0.64	+0.3
2,693,991	-		PGA1_c25820	0.66	-2.4
2,694,001	-		PGA1_c25820	0.68	-1.3
2,694,040	+		PGA1_c25820	0.76	+0.7
2,694,060	+		PGA1_c25820	0.81	+1.2
2,694,107	+				+2.5
2,694,112	+				-3.2
2,694,125	-				-1.6
2,694,135	-				-0.9
2,694,146	+				-2.3
2,694,356	+				+0.3
2,694,364	-				+0.6
2,694,394	+		PGA1_c25840	0.11	-2.1
2,694,412	-		PGA1_c25840	0.13	+0.3
2,694,457	+		PGA1_c25840	0.17	-0.6
2,694,457	+		PGA1_c25840	0.17	-1.9
2,694,465	-		PGA1_c25840	0.17	+1.7
2,694,486	-		PGA1_c25840	0.19	+2.1
2,694,492	+		PGA1_c25840	0.20	-0.1
2,694,502	+		PGA1_c25840	0.21	-0.1
2,694,510	-		PGA1_c25840	0.21	+2.6
2,694,569	+		PGA1_c25840	0.27	-1.9
2,694,569	+		PGA1_c25840	0.27	-0.7
2,694,569	+		PGA1_c25840	0.27	-0.5
2,694,569	+		PGA1_c25840	0.27	-0.5
2,694,569	+		PGA1_c25840	0.27	-2.8
2,694,569	+		PGA1_c25840	0.27	-0.3
2,694,577	-		PGA1_c25840	0.27	-1.1
2,694,577	-		PGA1_c25840	0.27	-2.6
2,694,577	-		PGA1_c25840	0.27	+0.8
2,694,577	-		PGA1_c25840	0.27	-0.1
2,694,577	-		PGA1_c25840	0.27	-0.9
2,694,577	-		PGA1_c25840	0.27	-2.6
2,694,577	-		PGA1_c25840	0.27	-0.5
2,694,579	+		PGA1_c25840	0.28	-0.3
2,694,621	-		PGA1_c25840	0.31	-1.5
2,694,624	+		PGA1_c25840	0.32	+1.7
2,694,624	+		PGA1_c25840	0.32	-0.9
2,694,632	-		PGA1_c25840	0.32	+2.1
2,694,683	+		PGA1_c25840	0.37	-1.8
2,694,683	+		PGA1_c25840	0.37	-1.8
2,694,691	-		PGA1_c25840	0.38	-1.6
2,694,691	-		PGA1_c25840	0.38	-1.1
2,694,693	+		PGA1_c25840	0.38	+2.3
2,694,693	+		PGA1_c25840	0.38	+0.8
2,694,693	+		PGA1_c25840	0.38	+1.5
2,694,713	+		PGA1_c25840	0.40	+0.9
2,694,718	+		PGA1_c25840	0.40	+0.7
2,694,723	+		PGA1_c25840	0.41	+2.7
2,694,723	+		PGA1_c25840	0.41	+2.5
2,694,723	+		PGA1_c25840	0.41	+0.7
2,694,723	+		PGA1_c25840	0.41	+2.7
2,694,723	+		PGA1_c25840	0.41	-1.6
2,694,731	-		PGA1_c25840	0.41	-0.7
2,694,731	-		PGA1_c25840	0.41	+2.6
2,694,771	-		PGA1_c25840	0.45	+1.1
2,694,788	+		PGA1_c25840	0.46	+1.5
2,694,788	+		PGA1_c25840	0.46	-1.2
2,694,818	+		PGA1_c25840	0.49	-0.9
2,694,852	-		PGA1_c25840	0.52	-1.4
2,694,852	-		PGA1_c25840	0.52	-0.7
2,694,866	+		PGA1_c25840	0.53	-2.6
2,694,874	-		PGA1_c25840	0.54	-2.3
2,694,892	+		PGA1_c25840	0.56	-0.1
2,694,903	+		PGA1_c25840	0.57	-0.3
2,694,910	-		PGA1_c25840	0.57	+0.7
2,694,912	-		PGA1_c25840	0.58	+0.9
2,694,912	-		PGA1_c25840	0.58	-2.5
2,694,926	+		PGA1_c25840	0.59	-0.5
2,694,926	+		PGA1_c25840	0.59	-1.8
2,694,934	-		PGA1_c25840	0.59	+0.3
2,695,040	-		PGA1_c25840	0.69	-1.9
2,695,040	-		PGA1_c25840	0.69	+2.0
2,695,056	+		PGA1_c25840	0.70	-3.4
2,695,056	+		PGA1_c25840	0.70	+2.7
2,695,056	+		PGA1_c25840	0.70	+2.1
2,695,064	-		PGA1_c25840	0.71	+2.0
2,695,064	-		PGA1_c25840	0.71	+1.4
2,695,073	+		PGA1_c25840	0.72	+1.0
2,695,105	-		PGA1_c25840	0.75	+1.3
2,695,130	-		PGA1_c25840	0.77	-1.8
2,695,138	-		PGA1_c25840	0.78	-0.3
2,695,162	+		PGA1_c25840	0.80	-1.7
2,695,167	+		PGA1_c25840	0.80	-2.4
2,695,175	-		PGA1_c25840	0.81	+1.3
2,695,175	-		PGA1_c25840	0.81	-0.3
2,695,175	-		PGA1_c25840	0.81	+0.8
2,695,182	-		PGA1_c25840	0.82	-2.7
2,695,183	-		PGA1_c25840	0.82	+1.0
2,695,183	-		PGA1_c25840	0.82	-1.6
2,695,217	-		PGA1_c25840	0.85	+0.5
2,695,219	+		PGA1_c25840	0.85	-2.5
2,695,251	+		PGA1_c25840	0.88	+1.1
2,695,251	+		PGA1_c25840	0.88	+0.1
2,695,259	-		PGA1_c25840	0.89	-1.5
2,695,265	-		PGA1_c25840	0.89	+1.6
2,695,267	+		PGA1_c25840	0.89	-0.9
2,695,271	+		PGA1_c25840	0.90	-1.4
2,695,280	+				+0.3
2,695,288	+				+1.3
2,695,296	+				+1.3
2,695,296	+				+2.3
2,695,296	-				-2.0
2,695,304	-				+1.5
2,695,304	-				-1.2
2,695,304	-				+0.7
2,695,307	+				+0.3
2,695,330	+				+2.1
2,695,335	+				+1.8
2,695,335	+				+0.3
2,695,335	+				-2.3
2,695,338	-				-0.3
2,695,339	-				+0.7
2,695,343	-				+0.0
2,695,380	+				+2.9
2,695,390	+				-1.2
2,695,391	+				+1.7
2,695,398	-				+1.6
2,695,409	-		PGA1_c25850	0.14	-2.3
2,695,415	+		PGA1_c25850	0.17	+2.3
2,695,418	-		PGA1_c25850	0.18	+0.5
2,695,467	+		PGA1_c25850	0.43	-0.3
2,695,475	-		PGA1_c25850	0.47	-0.3
2,695,489	-		PGA1_c25850	0.54	-1.4
2,695,489	-		PGA1_c25850	0.54	-0.3
2,695,489	-		PGA1_c25850	0.54	-1.8
2,695,489	-		PGA1_c25850	0.54	-0.5
2,695,489	-		PGA1_c25850	0.54	+1.8
2,695,489	-		PGA1_c25850	0.54	-2.9
2,695,489	-		PGA1_c25850	0.54	-0.9
2,695,526	+		PGA1_c25850	0.72	+1.3
2,695,526	+		PGA1_c25850	0.72	-1.4
2,695,534	-		PGA1_c25850	0.76	-2.1
2,695,534	-		PGA1_c25850	0.76	+0.6
2,695,534	-		PGA1_c25850	0.76	-0.0
2,695,568	+				-2.1
2,695,576	-				-0.3
2,695,576	-				-1.3
2,695,601	+				-1.3
2,695,609	-				-0.7
2,695,609	-				-1.8
2,695,619	-				-1.2
2,695,634	+				-1.8
2,695,686	+				+2.0
2,695,751	+		PGA1_c25860	0.15	-2.4
2,695,751	+		PGA1_c25860	0.15	-0.1
2,695,757	-		PGA1_c25860	0.15	-1.8
2,695,784	+		PGA1_c25860	0.17	-0.3
2,695,786	+		PGA1_c25860	0.18	-2.0
2,695,795	+		PGA1_c25860	0.18	+2.3
2,695,801	-		PGA1_c25860	0.19	-2.1
2,695,801	-		PGA1_c25860	0.19	+2.5
2,695,803	-		PGA1_c25860	0.19	+1.1
2,695,818	+		PGA1_c25860	0.20	-0.5
2,695,849	+		PGA1_c25860	0.23	+1.9
2,695,854	+		PGA1_c25860	0.23	-2.3
2,695,857	-		PGA1_c25860	0.23	-1.9
2,695,857	-		PGA1_c25860	0.23	-1.1
2,695,857	-		PGA1_c25860	0.23	+1.4
2,695,919	+		PGA1_c25860	0.29	-1.2
2,695,927	-		PGA1_c25860	0.29	+1.1
2,695,947	+		PGA1_c25860	0.31	-1.7
2,695,947	+		PGA1_c25860	0.31	-0.5
2,695,958	+		PGA1_c25860	0.32	+0.9
2,695,972	+		PGA1_c25860	0.33	+0.3
2,695,972	+		PGA1_c25860	0.33	+1.3
2,695,972	+		PGA1_c25860	0.33	-0.7
2,695,980	-		PGA1_c25860	0.34	-0.3
2,695,980	-		PGA1_c25860	0.34	-1.3
2,696,017	+		PGA1_c25860	0.37	-0.3
2,696,082	+		PGA1_c25860	0.42	-2.4
2,696,174	+		PGA1_c25860	0.50	+0.7
2,696,194	-		PGA1_c25860	0.51	+1.8
2,696,195	-		PGA1_c25860	0.51	-0.3
2,696,195	-		PGA1_c25860	0.51	+0.2
2,696,201	+		PGA1_c25860	0.52	+1.6
2,696,321	+		PGA1_c25860	0.62	-2.5
2,696,321	+		PGA1_c25860	0.62	+1.9
2,696,321	+		PGA1_c25860	0.62	+1.3
2,696,329	-		PGA1_c25860	0.62	-2.0
2,696,329	-		PGA1_c25860	0.62	-0.2
2,696,380	+		PGA1_c25860	0.66	-0.7