Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19380

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,015,946	+				-2.0
2,015,946	+				-1.5
2,015,946	+				+0.8
2,015,998	-				-1.2
2,016,016	+				-1.9
2,016,027	+				+0.4
2,016,027	+				+1.3
2,016,035	-				-1.1
2,016,035	-				+1.0
2,016,053	+				-2.3
2,016,053	+				-1.4
2,016,053	+				-2.4
2,016,053	+				-1.9
2,016,058	+				-0.5
2,016,065	+				+0.4
2,016,066	-				-1.2
2,016,071	-				+1.4
2,016,072	+				-0.7
2,016,080	-				+1.1
2,016,115	+				+0.5
2,016,174	+		PGA1_c19370	0.15	-1.7
2,016,174	+		PGA1_c19370	0.15	+1.3
2,016,176	+		PGA1_c19370	0.15	-2.7
2,016,184	-		PGA1_c19370	0.16	+2.6
2,016,267	-		PGA1_c19370	0.27	-0.5
2,016,308	+		PGA1_c19370	0.32	+2.7
2,016,308	+		PGA1_c19370	0.32	-1.1
2,016,323	+		PGA1_c19370	0.34	-1.2
2,016,331	-		PGA1_c19370	0.35	-2.9
2,016,331	-		PGA1_c19370	0.35	-1.2
2,016,340	+		PGA1_c19370	0.36	+0.5
2,016,340	+		PGA1_c19370	0.36	+1.1
2,016,340	+		PGA1_c19370	0.36	+0.0
2,016,348	-		PGA1_c19370	0.37	+2.9
2,016,428	+		PGA1_c19370	0.48	-1.1
2,016,442	+		PGA1_c19370	0.50	-1.1
2,016,497	-		PGA1_c19370	0.57	-0.7
2,016,507	-		PGA1_c19370	0.58	-1.2
2,016,519	+		PGA1_c19370	0.60	-1.7
2,016,576	+		PGA1_c19370	0.67	+0.2
2,016,589	+		PGA1_c19370	0.69	+1.5
2,016,597	-		PGA1_c19370	0.70	-1.2
2,016,597	-		PGA1_c19370	0.70	+0.9
2,016,607	+		PGA1_c19370	0.71	-0.4
2,016,607	+		PGA1_c19370	0.71	+0.2
2,016,642	-		PGA1_c19370	0.76	+1.4
2,016,700	+		PGA1_c19370	0.83	+1.7
2,016,748	+		PGA1_c19370	0.90	+4.0
2,016,840	-				-0.5
2,016,861	+				+1.2
2,016,866	+				+1.5
2,016,869	-				-1.4
2,016,871	+				-0.3
2,016,884	+				-1.0
2,016,930	+				-2.4
2,016,930	+				+1.0
2,016,937	+				+2.6
2,016,938	-				+1.5
2,016,938	-				-2.3
2,016,938	-				+2.1
2,016,938	-				+0.3
2,016,938	-				-0.7
2,016,938	-				-1.6
2,016,938	-				-0.1
2,016,938	-				-1.4
2,016,955	-				-2.0
2,016,978	-		PGA1_c19380	0.11	-0.7
2,016,979	+		PGA1_c19380	0.12	+2.4
2,016,979	+		PGA1_c19380	0.12	+1.0
2,016,979	+		PGA1_c19380	0.12	+1.2
2,016,980	-		PGA1_c19380	0.12	+1.0
2,016,983	-		PGA1_c19380	0.12	-1.9
2,016,987	-		PGA1_c19380	0.13	+0.1
2,016,987	-		PGA1_c19380	0.13	-2.5
2,016,987	-		PGA1_c19380	0.13	-0.7
2,016,987	-		PGA1_c19380	0.13	-0.7
2,016,998	-		PGA1_c19380	0.15	+1.9
2,016,999	+		PGA1_c19380	0.15	-0.3
2,016,999	+		PGA1_c19380	0.15	+0.1
2,017,007	-		PGA1_c19380	0.16	+1.7
2,017,007	-		PGA1_c19380	0.16	-1.8
2,017,007	-		PGA1_c19380	0.16	-1.4
2,017,007	-		PGA1_c19380	0.16	-1.8
2,017,009	-		PGA1_c19380	0.16	-2.2
2,017,009	-		PGA1_c19380	0.16	+1.1
2,017,009	-		PGA1_c19380	0.16	+0.1
2,017,017	-		PGA1_c19380	0.18	-1.9
2,017,045	+		PGA1_c19380	0.22	+0.9
2,017,053	-		PGA1_c19380	0.23	-2.7
2,017,087	-		PGA1_c19380	0.29	-1.1
2,017,098	-		PGA1_c19380	0.30	+0.7
2,017,099	+		PGA1_c19380	0.30	+0.3
2,017,123	+		PGA1_c19380	0.34	-0.5
2,017,128	+		PGA1_c19380	0.35	-2.2
2,017,136	-		PGA1_c19380	0.36	+2.1
2,017,157	+		PGA1_c19380	0.40	-1.1
2,017,157	+		PGA1_c19380	0.40	+0.8
2,017,165	-		PGA1_c19380	0.41	+1.2
2,017,176	+		PGA1_c19380	0.43	+0.7
2,017,204	+		PGA1_c19380	0.47	-0.9
2,017,204	+		PGA1_c19380	0.47	-1.5
2,017,213	+		PGA1_c19380	0.48	-1.4
2,017,215	+		PGA1_c19380	0.49	+1.1
2,017,222	+		PGA1_c19380	0.50	+0.1
2,017,230	-		PGA1_c19380	0.51	-0.0
2,017,230	-		PGA1_c19380	0.51	+3.3
2,017,237	+		PGA1_c19380	0.52	-1.4
2,017,237	+		PGA1_c19380	0.52	-1.6
2,017,237	+		PGA1_c19380	0.52	-2.3
2,017,237	+		PGA1_c19380	0.52	-0.5
2,017,245	-		PGA1_c19380	0.54	+1.1
2,017,245	-		PGA1_c19380	0.54	-2.3
2,017,245	-		PGA1_c19380	0.54	+2.5
2,017,245	-		PGA1_c19380	0.54	+1.7
2,017,245	-		PGA1_c19380	0.54	-1.7
2,017,245	-		PGA1_c19380	0.54	-2.8
2,017,245	-		PGA1_c19380	0.54	-2.9
2,017,247	+		PGA1_c19380	0.54	-2.2
2,017,255	-		PGA1_c19380	0.55	-0.2
2,017,256	+		PGA1_c19380	0.55	-0.7
2,017,261	+		PGA1_c19380	0.56	-0.0
2,017,261	+		PGA1_c19380	0.56	-0.4
2,017,269	-		PGA1_c19380	0.57	-2.7
2,017,269	-		PGA1_c19380	0.57	-1.1
2,017,291	+		PGA1_c19380	0.61	-2.9
2,017,293	-		PGA1_c19380	0.61	+1.9
2,017,299	-		PGA1_c19380	0.62	+0.2
2,017,312	-		PGA1_c19380	0.64	-2.9
2,017,331	+		PGA1_c19380	0.67	+1.5
2,017,341	+		PGA1_c19380	0.69	-1.5
2,017,346	+		PGA1_c19380	0.70	+0.2
2,017,346	+		PGA1_c19380	0.70	+1.7
2,017,346	+		PGA1_c19380	0.70	+0.1
2,017,346	+		PGA1_c19380	0.70	-0.5
2,017,346	+		PGA1_c19380	0.70	-1.8
2,017,346	+		PGA1_c19380	0.70	-2.9
2,017,346	+		PGA1_c19380	0.70	-0.4
2,017,349	-		PGA1_c19380	0.70	+1.3
2,017,349	-		PGA1_c19380	0.70	-0.7
2,017,349	-		PGA1_c19380	0.70	+1.0
2,017,354	-		PGA1_c19380	0.71	-1.9
2,017,354	-		PGA1_c19380	0.71	+1.3
2,017,354	-		PGA1_c19380	0.71	+0.4
2,017,354	-		PGA1_c19380	0.71	+0.9
2,017,354	-		PGA1_c19380	0.71	-1.8
2,017,354	-		PGA1_c19380	0.71	+1.4
2,017,378	+		PGA1_c19380	0.75	-1.9
2,017,378	+		PGA1_c19380	0.75	-0.9
2,017,378	+		PGA1_c19380	0.75	-1.6
2,017,378	+		PGA1_c19380	0.75	+0.9
2,017,378	+		PGA1_c19380	0.75	+1.4
2,017,378	+		PGA1_c19380	0.75	-2.2
2,017,386	-		PGA1_c19380	0.76	+1.6
2,017,386	-		PGA1_c19380	0.76	+0.3
2,017,386	-		PGA1_c19380	0.76	-0.9
2,017,386	-		PGA1_c19380	0.76	-3.0
2,017,386	-		PGA1_c19380	0.76	-1.6
2,017,388	+		PGA1_c19380	0.76	-2.9
2,017,388	+		PGA1_c19380	0.76	+0.7
2,017,388	+		PGA1_c19380	0.76	+1.8
2,017,391	-		PGA1_c19380	0.77	-0.5
2,017,393	+		PGA1_c19380	0.77	-2.0
2,017,396	-		PGA1_c19380	0.77	+1.1
2,017,396	-		PGA1_c19380	0.77	+2.8
2,017,396	-		PGA1_c19380	0.77	-2.7
2,017,435	+		PGA1_c19380	0.84	+1.8
2,017,443	-		PGA1_c19380	0.85	-0.9
2,017,488	+				-2.0
2,017,496	-				+0.5
2,017,511	-				-1.1
2,017,513	+				+0.4
2,017,513	+				+1.7
2,017,513	+				+0.1
2,017,513	+				-3.2
2,017,513	+				-2.4
2,017,513	+				-0.4
2,017,513	+				+1.6
2,017,513	+				-0.0
2,017,513	+				+0.7
2,017,513	+				-2.2
2,017,513	+				+0.2
2,017,513	+				-2.0
2,017,513	+				+2.3
2,017,513	+				-2.9
2,017,513	+				-0.9
2,017,513	+				-0.5
2,017,513	+				+2.0
2,017,513	+				-0.0
2,017,513	+				-2.9
2,017,513	+				-1.6
2,017,513	+				+1.8
2,017,513	+				-2.2
2,017,513	+				-0.5
2,017,513	+				-0.8
2,017,513	+				-0.9
2,017,513	+				-1.8
2,017,513	+				-2.3
2,017,513	+				+0.8
2,017,513	+				-2.2
2,017,513	+				-0.9
2,017,513	+				-0.2
2,017,513	+				-2.8
2,017,513	+				-1.8
2,017,513	+				+1.4
2,017,513	+				-2.9
2,017,513	+				-2.2
2,017,513	+				+1.2
2,017,513	+				-2.8
2,017,513	+				+1.0
2,017,521	+				-3.3
2,017,521	+				+1.4
2,017,521	+				-1.6
2,017,521	+				-0.2
2,017,521	+				+1.8
2,017,521	+				-0.4
2,017,521	-				-0.1
2,017,521	-				+0.1
2,017,521	-				+0.6
2,017,521	-				-0.5
2,017,521	-				+1.0
2,017,521	-				-0.2
2,017,521	-				+1.2
2,017,521	-				+1.9
2,017,521	-				-0.5
2,017,521	-				+1.9
2,017,521	-				+0.9
2,017,521	-				+0.9
2,017,521	-				+0.1
2,017,521	-				+1.8
2,017,521	-				-1.4
2,017,521	-				-1.7
2,017,521	-				+0.7
2,017,521	-				-0.7
2,017,521	-				-2.3
2,017,521	-				+0.9
2,017,521	-				-1.8
2,017,521	-				+1.4
2,017,521	-				-1.6
2,017,521	-				+2.1
2,017,521	-				+1.2
2,017,521	-				+2.2
2,017,521	-				+1.8
2,017,521	-				+3.7
2,017,521	-				+0.7
2,017,521	-				-1.2
2,017,521	-				+0.7
2,017,521	-				+1.4
2,017,521	-				-0.4
2,017,521	-				+0.2
2,017,521	-				+1.2
2,017,521	-				+0.2
2,017,521	-				+0.7
2,017,521	-				-2.7
2,017,521	-				-0.5
2,017,521	-				-0.5
2,017,529	-				-0.2
2,017,529	-				+1.3
2,017,529	-				-0.9
2,017,529	-				+0.5
2,017,529	-				-0.0
2,017,546	+				+0.4
2,017,556	+				-2.4
2,017,558	+				+1.1
2,017,558	+				+2.0
2,017,559	+				+1.6
2,017,559	+				+1.5
2,017,559	+				+1.5
2,017,559	+				+2.3
2,017,559	+				+1.0
2,017,567	-				+0.1
2,017,567	-				-1.7
2,017,572	+				-0.7
2,017,572	+				+2.1
2,017,572	+				-1.2
2,017,572	+				-0.9
2,017,572	+				-0.1
2,017,577	+				+1.7
2,017,580	-				+1.4
2,017,580	-				+0.4
2,017,580	-				-1.6
2,017,628	+				+1.1
2,017,634	-				-0.5
2,017,634	-				-1.6
2,017,676	-				+0.8
2,017,763	-				+1.4
2,017,765	-				+1.8
2,017,767	+				-2.0
2,017,800	+				+1.2
2,017,800	+				+0.7
2,017,801	+				+0.1
2,017,801	+				+0.9
2,017,801	+				+0.2
2,017,801	+				-2.1
2,017,809	-				+0.5
2,017,809	-				+0.8
2,017,809	-				-1.7
2,017,809	-				-0.1
2,017,809	-				-3.5
2,017,809	-				-2.0
2,017,809	-				+0.6
2,017,809	-				+0.1
2,017,809	-				+1.6
2,017,809	-				-2.0
2,017,809	-				-1.2
2,017,809	-				+0.9
2,017,810	+				-2.4
2,017,815	+				-1.1
2,017,823	-				+3.0
2,017,823	-				-0.2
2,017,838	-				-3.3
2,017,863	+				+1.1
2,017,877	+				+0.6
2,017,882	+				+0.9
2,017,887	+				+1.0
2,017,887	+				-1.8
2,017,895	-				+1.0
2,017,905	-				+1.7
2,017,920	+				-0.2
2,017,920	+				+1.2
2,017,928	-				-0.5
2,017,928	-				-1.9
2,017,932	+				-2.1
2,017,932	+				-0.4
2,017,932	+				-1.9
2,017,940	+				+1.1
2,017,940	-				+0.1
2,017,940	-				-0.0
2,017,951	+				+0.1
2,017,959	-				-2.4
2,017,959	-				+1.7
2,017,977	-				+0.5
2,017,980	-				+0.5
2,017,986	+				+2.4
2,017,996	+				-0.9
2,017,996	+				+0.6
2,018,004	-				+0.7
2,018,007	+				-1.4
2,018,007	+				-0.2
2,018,007	+				+0.8
2,018,007	+				-1.3
2,018,015	-				+2.5
2,018,015	-				+1.2
2,018,032	-				+0.9
2,018,038	-				+0.7
2,018,052	-				-0.2
2,018,069	-				+0.5
2,018,137	+				+2.7
2,018,137	+				-1.6
2,018,137	+				-1.1
2,018,137	+				-2.3
2,018,137	+				-2.7
2,018,137	+				-0.4
2,018,137	+				-2.7
2,018,145	-				-2.2
2,018,145	-				+2.0
2,018,145	-				-2.1
2,018,145	-				-2.1
2,018,145	-				-2.3
2,018,147	+				-2.4
2,018,147	+				+1.7
2,018,155	-				+1.5
2,018,168	-				+0.5
2,018,184	+				+1.2
2,018,186	-				-0.7
2,018,192	-				-1.2
2,018,192	-				-0.5
2,018,194	-				+0.3
2,018,194	-				+1.5
2,018,194	-				-1.4
2,018,201	+				+3.1
2,018,204	-				-1.4
2,018,209	-				+1.7
2,018,228	+				-0.5
2,018,236	-				-1.4
2,018,236	-				+1.7
2,018,271	+				-0.9
2,018,272	-				+0.7
2,018,279	-		PGA1_c19400	0.11	+0.6
2,018,279	-		PGA1_c19400	0.11	-3.1
2,018,279	-		PGA1_c19400	0.11	-2.1
2,018,321	+		PGA1_c19400	0.20	-3.1
2,018,329	-		PGA1_c19400	0.21	-1.5
2,018,346	+		PGA1_c19400	0.25	+1.4
2,018,346	+		PGA1_c19400	0.25	-2.9
2,018,354	-		PGA1_c19400	0.27	-0.7
2,018,354	-		PGA1_c19400	0.27	-2.3
2,018,354	-		PGA1_c19400	0.27	-2.7
2,018,364	+		PGA1_c19400	0.29	-1.7
2,018,364	+		PGA1_c19400	0.29	+0.0
2,018,364	+		PGA1_c19400	0.29	+1.8
2,018,364	+		PGA1_c19400	0.29	-0.9
2,018,372	-		PGA1_c19400	0.31	-0.1
2,018,372	-		PGA1_c19400	0.31	+0.7
2,018,372	-		PGA1_c19400	0.31	+0.9
2,018,372	-		PGA1_c19400	0.31	+0.5
2,018,372	-		PGA1_c19400	0.31	+0.8
2,018,381	-		PGA1_c19400	0.32	+2.3
2,018,381	-		PGA1_c19400	0.32	+1.1
2,018,474	-		PGA1_c19400	0.52	+2.2
2,018,496	+		PGA1_c19400	0.57	-1.1
2,018,504	-		PGA1_c19400	0.59	-1.7