Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18740

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,943,965	-				-0.9
1,943,978	-				+0.5
1,943,978	-				+1.2
1,943,978	-				-2.3
1,944,022	-		PGA1_c18730	0.11	+2.1
1,944,044	+		PGA1_c18730	0.13	-0.7
1,944,044	+		PGA1_c18730	0.13	-0.5
1,944,052	-		PGA1_c18730	0.14	+4.2
1,944,080	+		PGA1_c18730	0.17	+1.5
1,944,081	+		PGA1_c18730	0.17	+1.7
1,944,088	-		PGA1_c18730	0.18	+2.2
1,944,088	-		PGA1_c18730	0.18	-2.8
1,944,090	+		PGA1_c18730	0.18	-1.2
1,944,095	+		PGA1_c18730	0.18	-0.9
1,944,113	+		PGA1_c18730	0.20	+1.1
1,944,118	+		PGA1_c18730	0.20	+1.3
1,944,121	-		PGA1_c18730	0.21	+0.1
1,944,126	-		PGA1_c18730	0.21	-1.4
1,944,131	-		PGA1_c18730	0.22	+1.4
1,944,165	-		PGA1_c18730	0.25	+0.9
1,944,197	+		PGA1_c18730	0.28	-0.2
1,944,205	-		PGA1_c18730	0.29	-0.2
1,944,205	-		PGA1_c18730	0.29	+2.1
1,944,265	+		PGA1_c18730	0.35	-1.5
1,944,266	+		PGA1_c18730	0.35	-0.2
1,944,266	-		PGA1_c18730	0.35	+0.5
1,944,295	+		PGA1_c18730	0.38	+2.2
1,944,302	+		PGA1_c18730	0.38	-0.2
1,944,302	+		PGA1_c18730	0.38	-0.7
1,944,365	-		PGA1_c18730	0.45	-0.7
1,944,373	-		PGA1_c18730	0.45	+0.8
1,944,379	+		PGA1_c18730	0.46	+2.8
1,944,380	+		PGA1_c18730	0.46	+0.5
1,944,394	+		PGA1_c18730	0.47	-0.0
1,944,394	+		PGA1_c18730	0.47	-0.9
1,944,410	-		PGA1_c18730	0.49	-0.9
1,944,441	+		PGA1_c18730	0.52	-1.9
1,944,488	-		PGA1_c18730	0.57	-1.9
1,944,608	+		PGA1_c18730	0.68	-1.1
1,944,616	-		PGA1_c18730	0.69	+1.2
1,944,632	-		PGA1_c18730	0.71	-1.4
1,944,632	-		PGA1_c18730	0.71	+1.4
1,944,746	+		PGA1_c18730	0.82	-0.2
1,944,848	+				-1.5
1,944,848	+				-0.2
1,944,848	+				-1.5
1,944,856	-				-1.8
1,944,856	-				-1.2
1,944,856	-				+0.1
1,944,856	-				+1.3
1,944,936	-				+1.7
1,944,941	+				-0.7
1,944,941	+				+2.9
1,944,949	-				+1.5
1,944,949	-				+1.6
1,944,949	-				+0.6
1,944,996	-				-0.7
1,944,996	-				+0.4
1,945,006	-				+1.0
1,945,011	-				-0.5
1,945,013	-				+2.4
1,945,131	+		PGA1_c18740	0.24	-0.2
1,945,144	-		PGA1_c18740	0.25	+2.3
1,945,152	+		PGA1_c18740	0.26	+1.4
1,945,164	+		PGA1_c18740	0.28	+1.7
1,945,200	+		PGA1_c18740	0.33	-2.3
1,945,208	-		PGA1_c18740	0.34	-2.1
1,945,245	-		PGA1_c18740	0.39	-0.7
1,945,324	-		PGA1_c18740	0.49	-1.6
1,945,353	-		PGA1_c18740	0.53	+1.1
1,945,452	-		PGA1_c18740	0.66	+0.8
1,945,462	-		PGA1_c18740	0.67	+1.9
1,945,463	+		PGA1_c18740	0.67	+1.7
1,945,463	+		PGA1_c18740	0.67	+2.8
1,945,463	+		PGA1_c18740	0.67	-2.2
1,945,471	-		PGA1_c18740	0.68	+1.2
1,945,471	-		PGA1_c18740	0.68	+0.1
1,945,471	-		PGA1_c18740	0.68	+0.4
1,945,479	+		PGA1_c18740	0.69	-1.7
1,945,479	+		PGA1_c18740	0.69	+1.1
1,945,487	-		PGA1_c18740	0.70	+0.6
1,945,487	-		PGA1_c18740	0.70	-1.6
1,945,508	-		PGA1_c18740	0.73	+1.1
1,945,510	+		PGA1_c18740	0.73	+1.7
1,945,511	+		PGA1_c18740	0.73	+1.2
1,945,537	-		PGA1_c18740	0.77	-0.2
1,945,544	+		PGA1_c18740	0.78	-0.9
1,945,568	-		PGA1_c18740	0.81	-0.7
1,945,607	+		PGA1_c18740	0.86	+1.6
1,945,631	-		PGA1_c18740	0.89	-1.5
1,945,768	+				-1.5
1,945,776	-				-0.9
1,945,776	-				-0.5
1,945,818	+				+0.1
1,945,820	+				+2.4
1,945,940	+				+1.1
1,945,956	-				+1.6
1,945,977	+				-0.2
1,945,985	-				+2.1
1,946,015	-		PGA1_c18750	0.11	+0.1
1,946,019	+		PGA1_c18750	0.12	+2.4
1,946,054	+		PGA1_c18750	0.14	-0.5
1,946,062	-		PGA1_c18750	0.15	+1.1
1,946,191	+		PGA1_c18750	0.24	-2.8
1,946,191	+		PGA1_c18750	0.24	+2.5
1,946,199	-		PGA1_c18750	0.25	+1.7
1,946,199	-		PGA1_c18750	0.25	-0.7
1,946,200	-		PGA1_c18750	0.25	+0.5
1,946,211	+		PGA1_c18750	0.25	+1.0
1,946,211	+		PGA1_c18750	0.25	-1.7
1,946,211	+		PGA1_c18750	0.25	-2.1
1,946,211	+		PGA1_c18750	0.25	+1.4
1,946,216	+		PGA1_c18750	0.26	+1.3
1,946,219	-		PGA1_c18750	0.26	+1.9
1,946,219	-		PGA1_c18750	0.26	-0.7
1,946,219	-		PGA1_c18750	0.26	-0.7
1,946,219	-		PGA1_c18750	0.26	+2.3
1,946,219	-		PGA1_c18750	0.26	-1.2
1,946,230	+		PGA1_c18750	0.27	+1.8
1,946,276	+		PGA1_c18750	0.30	+2.3
1,946,289	-		PGA1_c18750	0.31	-1.7
1,946,311	-		PGA1_c18750	0.33	+1.1
1,946,311	-		PGA1_c18750	0.33	-0.2
1,946,326	-		PGA1_c18750	0.34	-1.1
1,946,326	-		PGA1_c18750	0.34	-2.2
1,946,350	-		PGA1_c18750	0.35	+1.0
1,946,391	+		PGA1_c18750	0.38	+1.1
1,946,431	+		PGA1_c18750	0.41	+2.4
1,946,454	-		PGA1_c18750	0.43	-2.6
1,946,470	+		PGA1_c18750	0.44	-0.5
1,946,470	+		PGA1_c18750	0.44	+2.0
1,946,478	+		PGA1_c18750	0.45	+0.2
1,946,478	-		PGA1_c18750	0.45	-1.7
1,946,478	-		PGA1_c18750	0.45	-2.2
1,946,478	-		PGA1_c18750	0.45	+2.5
1,946,517	+		PGA1_c18750	0.47	+0.5
1,946,525	-		PGA1_c18750	0.48	+0.4
1,946,556	+		PGA1_c18750	0.50	+1.8
1,946,564	-		PGA1_c18750	0.51	+3.1
1,946,619	+		PGA1_c18750	0.55	+3.3
1,946,639	+		PGA1_c18750	0.56	+2.3
1,946,639	+		PGA1_c18750	0.56	+2.8
1,946,647	-		PGA1_c18750	0.57	-0.5
1,946,647	-		PGA1_c18750	0.57	+1.3
1,946,687	-		PGA1_c18750	0.60	-1.4
1,946,707	+		PGA1_c18750	0.61	+2.7
1,946,707	+		PGA1_c18750	0.61	-0.7
1,946,707	+		PGA1_c18750	0.61	-0.7
1,946,707	+		PGA1_c18750	0.61	-1.1
1,946,707	+		PGA1_c18750	0.61	+0.0