Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14600

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,513,408	-				+3.5
1,513,408	-				+2.0
1,513,500	+		PGA1_c14590	0.12	+0.1
1,513,629	+		PGA1_c14590	0.26	-1.6
1,513,689	+		PGA1_c14590	0.33	-0.4
1,513,701	-		PGA1_c14590	0.34	-0.2
1,513,734	+		PGA1_c14590	0.38	-2.2
1,513,749	+		PGA1_c14590	0.39	-2.0
1,513,749	+		PGA1_c14590	0.39	+0.8
1,513,752	-		PGA1_c14590	0.40	-2.2
1,513,757	-		PGA1_c14590	0.40	+1.7
1,513,757	-		PGA1_c14590	0.40	-2.2
1,513,757	-		PGA1_c14590	0.40	-1.2
1,513,781	+		PGA1_c14590	0.43	-0.6
1,513,815	+		PGA1_c14590	0.47	-1.5
1,513,818	-		PGA1_c14590	0.47	+1.2
1,513,853	-		PGA1_c14590	0.51	+1.6
1,513,853	-		PGA1_c14590	0.51	+1.6
1,513,965	-		PGA1_c14590	0.63	+2.0
1,513,977	-		PGA1_c14590	0.65	-0.0
1,513,987	-		PGA1_c14590	0.66	+1.4
1,514,079	+		PGA1_c14590	0.76	+1.8
1,514,101	-		PGA1_c14590	0.78	+1.7
1,514,101	-		PGA1_c14590	0.78	-3.0
1,514,122	+		PGA1_c14590	0.81	+3.8
1,514,148	+		PGA1_c14590	0.84	+0.8
1,514,164	-		PGA1_c14590	0.85	+2.6
1,514,199	-		PGA1_c14590	0.89	+1.2
1,514,218	+				-0.1
1,514,238	-				-0.4
1,514,257	+				-0.1
1,514,321	+				+0.9
1,514,329	-				+1.8
1,514,348	+				-1.5
1,514,371	+				-2.7
1,514,371	+				+1.4
1,514,371	+				+2.2
1,514,379	-				-0.8
1,514,379	-				-1.8
1,514,379	-				+0.4
1,514,379	-				-2.5
1,514,379	-				+0.1
1,514,379	-				+1.2
1,514,388	+				+0.2
1,514,427	-				-0.3
1,514,429	+				+2.4
1,514,437	-				-1.9
1,514,437	-				+0.8
1,514,439	+				-0.6
1,514,447	-				+1.9
1,514,447	-				+0.1
1,514,447	-				-1.6
1,514,447	-				-1.9
1,514,480	+				-0.9
1,514,485	+				+2.9
1,514,485	+				-2.7
1,514,493	-				+1.9
1,514,493	-				-1.1
1,514,504	-				+0.5
1,514,524	+				-0.1
1,514,538	+				-2.6
1,514,582	+		PGA1_c14600	0.11	+1.2
1,514,665	-		PGA1_c14600	0.17	-2.4
1,514,667	+		PGA1_c14600	0.17	+0.1
1,514,667	+		PGA1_c14600	0.17	+2.3
1,514,667	+		PGA1_c14600	0.17	-1.4
1,514,667	+		PGA1_c14600	0.17	+1.7
1,514,667	+		PGA1_c14600	0.17	+2.0
1,514,667	+		PGA1_c14600	0.17	+0.6
1,514,667	+		PGA1_c14600	0.17	-1.1
1,514,667	+		PGA1_c14600	0.17	-1.6
1,514,667	+		PGA1_c14600	0.17	-1.0
1,514,667	+		PGA1_c14600	0.17	-1.6
1,514,667	+		PGA1_c14600	0.17	-0.0
1,514,667	+		PGA1_c14600	0.17	-1.0
1,514,667	+		PGA1_c14600	0.17	+1.6
1,514,675	-		PGA1_c14600	0.17	+0.0
1,514,675	-		PGA1_c14600	0.17	-3.5
1,514,675	-		PGA1_c14600	0.17	+0.9
1,514,675	-		PGA1_c14600	0.17	+2.7
1,514,675	-		PGA1_c14600	0.17	-1.7
1,514,675	-		PGA1_c14600	0.17	+0.5
1,514,687	+		PGA1_c14600	0.18	-0.8
1,514,692	+		PGA1_c14600	0.18	+1.2
1,514,704	+		PGA1_c14600	0.19	+1.5
1,514,790	-		PGA1_c14600	0.24	-0.8
1,514,790	-		PGA1_c14600	0.24	+2.5
1,514,790	-		PGA1_c14600	0.24	-1.8
1,514,804	+		PGA1_c14600	0.25	-2.0
1,514,818	+		PGA1_c14600	0.26	-2.8
1,514,875	+		PGA1_c14600	0.30	-1.0
1,514,924	+		PGA1_c14600	0.33	+2.3
1,514,924	+		PGA1_c14600	0.33	-1.8
1,514,924	+		PGA1_c14600	0.33	+2.1
1,514,934	+		PGA1_c14600	0.34	-1.7
1,514,934	+		PGA1_c14600	0.34	+0.4
1,514,939	+		PGA1_c14600	0.34	-1.2
1,514,941	+		PGA1_c14600	0.34	+0.2
1,514,941	+		PGA1_c14600	0.34	+1.5
1,514,942	-		PGA1_c14600	0.34	-1.5
1,515,016	-		PGA1_c14600	0.39	-1.0
1,515,050	+		PGA1_c14600	0.41	-1.5
1,515,068	+		PGA1_c14600	0.42	+1.5
1,515,092	+		PGA1_c14600	0.44	-0.8
1,515,097	+		PGA1_c14600	0.44	+2.1
1,515,097	+		PGA1_c14600	0.44	+3.5
1,515,176	-		PGA1_c14600	0.49	-0.6
1,515,184	+		PGA1_c14600	0.49	-0.1
1,515,196	-		PGA1_c14600	0.50	-1.6
1,515,217	+		PGA1_c14600	0.51	+0.6
1,515,234	+		PGA1_c14600	0.52	-1.8
1,515,242	-		PGA1_c14600	0.53	-2.1
1,515,242	-		PGA1_c14600	0.53	+3.6
1,515,336	-		PGA1_c14600	0.59	+1.8
1,515,336	-		PGA1_c14600	0.59	+1.4
1,515,375	+		PGA1_c14600	0.61	+0.6
1,515,456	+		PGA1_c14600	0.67	-1.5
1,515,480	+		PGA1_c14600	0.68	+1.2
1,515,504	-		PGA1_c14600	0.70	+1.8
1,515,542	-		PGA1_c14600	0.72	-0.4
1,515,544	+		PGA1_c14600	0.72	+0.6
1,515,544	+		PGA1_c14600	0.72	-0.1
1,515,551	+		PGA1_c14600	0.73	+2.2
1,515,552	-		PGA1_c14600	0.73	+2.6
1,515,552	-		PGA1_c14600	0.73	-0.0
1,515,552	-		PGA1_c14600	0.73	+1.5
1,515,552	-		PGA1_c14600	0.73	-1.0
1,515,552	-		PGA1_c14600	0.73	-0.0
1,515,552	-		PGA1_c14600	0.73	+1.0
1,515,561	-		PGA1_c14600	0.73	+1.6
1,515,598	-		PGA1_c14600	0.76	-0.4
1,515,633	+		PGA1_c14600	0.78	+0.6
1,515,653	-		PGA1_c14600	0.79	-2.7
1,515,678	+		PGA1_c14600	0.81	+1.6
1,515,678	+		PGA1_c14600	0.81	+2.6
1,515,678	+		PGA1_c14600	0.81	+0.7
1,515,678	+		PGA1_c14600	0.81	-0.4
1,515,678	+		PGA1_c14600	0.81	+0.8
1,515,686	-		PGA1_c14600	0.81	-2.2
1,515,686	-		PGA1_c14600	0.81	-0.1
1,515,686	-		PGA1_c14600	0.81	+1.8
1,515,686	-		PGA1_c14600	0.81	+1.0
1,515,686	-		PGA1_c14600	0.81	-0.1
1,515,686	-		PGA1_c14600	0.81	+1.1
1,515,703	-		PGA1_c14600	0.82	+2.5
1,515,709	+		PGA1_c14600	0.83	-1.0
1,515,709	-		PGA1_c14600	0.83	-0.6
1,515,709	-		PGA1_c14600	0.83	+1.0
1,515,734	+		PGA1_c14600	0.84	+2.0
1,515,739	+		PGA1_c14600	0.84	-1.1
1,515,739	+		PGA1_c14600	0.84	-1.5
1,515,739	+		PGA1_c14600	0.84	+2.1
1,515,742	-		PGA1_c14600	0.85	+2.0
1,515,747	-		PGA1_c14600	0.85	-2.1
1,515,749	+		PGA1_c14600	0.85	-0.4
1,515,799	+		PGA1_c14600	0.88	+3.2
1,515,799	+		PGA1_c14600	0.88	+0.2
1,515,799	+		PGA1_c14600	0.88	-1.2
1,515,799	+		PGA1_c14600	0.88	+0.6
1,515,799	+		PGA1_c14600	0.88	-0.8
1,515,799	+		PGA1_c14600	0.88	-0.1
1,515,799	+		PGA1_c14600	0.88	+0.2
1,515,799	+		PGA1_c14600	0.88	+0.1
1,515,799	+		PGA1_c14600	0.88	+2.5
1,515,807	-		PGA1_c14600	0.89	+0.8
1,515,807	-		PGA1_c14600	0.89	+0.3
1,515,807	-		PGA1_c14600	0.89	-1.4
1,515,807	-		PGA1_c14600	0.89	-1.1
1,515,807	-		PGA1_c14600	0.89	+0.3
1,515,807	-		PGA1_c14600	0.89	-1.9
1,515,807	-		PGA1_c14600	0.89	+1.0
1,515,807	-		PGA1_c14600	0.89	-0.4
1,515,807	-		PGA1_c14600	0.89	-1.7
1,515,807	-		PGA1_c14600	0.89	-1.7
1,515,807	-		PGA1_c14600	0.89	+1.5
1,515,814	+		PGA1_c14600	0.89	-2.4
1,515,821	+		PGA1_c14600	0.90	+0.1
1,515,827	+				+1.1
1,515,827	+				+1.5
1,515,832	+				-1.0
1,515,832	+				-0.2
1,515,835	-				+3.0
1,515,840	+				+0.2
1,515,840	-				-0.8
1,515,840	-				-2.1
1,515,850	+				-1.8
1,515,858	+				-0.8
1,515,858	-				+0.6
1,515,864	+				+2.9
1,515,868	+				-0.1
1,515,868	+				+0.0
1,515,880	-				+1.1
1,515,899	+				-0.4
1,515,899	+				-2.1
1,515,899	+				-2.2
1,515,899	+				-3.0
1,515,899	+				-0.3
1,515,907	-				+1.5
1,515,907	-				+2.2
1,515,907	-				-0.4
1,515,907	-				+1.9
1,515,907	-				+1.7
1,515,907	-				+0.2
1,515,909	+				-2.4
1,515,909	+				-0.4
1,515,909	-				+2.3
1,515,929	+				+1.6
1,515,937	-				-2.7
1,515,954	+				+0.6
1,515,962	-				-1.5
1,515,999	+				+1.7
1,515,999	+				+0.5
1,515,999	+				-2.2
1,515,999	+				+0.9
1,515,999	+				+1.1
1,515,999	+				-0.6
1,515,999	+				-0.1
1,515,999	+				+0.9
1,515,999	+				+1.8
1,515,999	+				-0.4
1,515,999	+				-2.0
1,515,999	+				-0.4
1,515,999	+				+0.3
1,516,007	-				+0.8
1,516,007	-				-1.2
1,516,007	-				+1.5
1,516,007	-				+1.4
1,516,007	-				+1.3
1,516,007	-				+0.0
1,516,007	-				-2.0
1,516,007	-				+1.6
1,516,010	+				+2.3
1,516,011	+				+2.1
1,516,120	-				-2.4
1,516,125	+				-0.8