Strain Fitness in Marinobacter adhaerens HP15 around HP15_3303

Experiment: m.b. pH6.5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3302 and HP15_3303 are separated by 70 nucleotidesHP15_3303 and HP15_3304 overlap by 17 nucleotidesHP15_3304 and HP15_3305 overlap by 1 nucleotides HP15_3302: HP15_3302 - sterol desaturase family protein, at 3,459,932 to 3,460,918 _3302 HP15_3303: HP15_3303 - lysophospholipase, at 3,460,989 to 3,461,846 _3303 HP15_3304: HP15_3304 - molybdenum ABC transporter, periplasmic binding protein, at 3,461,830 to 3,462,633 _3304 HP15_3305: HP15_3305 - molybdate ABC transporter, inner membrane subunit, at 3,462,633 to 3,463,313 _3305 Position (kb) 3460 3461 3462Strain fitness (log2 ratio) -1 0 1at 3460.065 kb on + strand, within HP15_3302at 3460.120 kb on + strand, within HP15_3302at 3460.174 kb on + strand, within HP15_3302at 3460.182 kb on - strand, within HP15_3302at 3460.202 kb on + strand, within HP15_3302at 3460.202 kb on + strand, within HP15_3302at 3460.211 kb on - strand, within HP15_3302at 3460.211 kb on - strand, within HP15_3302at 3460.277 kb on + strand, within HP15_3302at 3460.308 kb on + strand, within HP15_3302at 3460.314 kb on + strand, within HP15_3302at 3460.314 kb on + strand, within HP15_3302at 3460.388 kb on - strand, within HP15_3302at 3460.429 kb on - strand, within HP15_3302at 3460.456 kb on + strand, within HP15_3302at 3460.481 kb on + strand, within HP15_3302at 3460.481 kb on + strand, within HP15_3302at 3460.482 kb on + strand, within HP15_3302at 3460.484 kb on - strand, within HP15_3302at 3460.712 kb on - strand, within HP15_3302at 3460.716 kb on - strand, within HP15_3302at 3460.733 kb on - strand, within HP15_3302at 3460.749 kb on - strand, within HP15_3302at 3460.905 kb on - strandat 3461.121 kb on - strand, within HP15_3303at 3461.185 kb on + strand, within HP15_3303at 3461.235 kb on + strand, within HP15_3303at 3461.238 kb on - strand, within HP15_3303at 3461.240 kb on + strand, within HP15_3303at 3461.248 kb on - strand, within HP15_3303at 3461.248 kb on - strand, within HP15_3303at 3461.248 kb on - strand, within HP15_3303at 3461.275 kb on + strand, within HP15_3303at 3461.283 kb on - strand, within HP15_3303at 3461.283 kb on - strand, within HP15_3303at 3461.354 kb on + strand, within HP15_3303at 3461.398 kb on + strand, within HP15_3303at 3461.398 kb on + strand, within HP15_3303at 3461.465 kb on + strand, within HP15_3303at 3461.513 kb on - strand, within HP15_3303at 3461.783 kb on + strandat 3461.783 kb on + strandat 3461.820 kb on + strandat 3461.950 kb on - strand, within HP15_3304at 3461.975 kb on + strand, within HP15_3304at 3462.037 kb on - strand, within HP15_3304at 3462.095 kb on - strand, within HP15_3304at 3462.105 kb on + strand, within HP15_3304at 3462.110 kb on + strand, within HP15_3304at 3462.113 kb on - strand, within HP15_3304at 3462.118 kb on - strand, within HP15_3304at 3462.118 kb on - strand, within HP15_3304at 3462.118 kb on - strand, within HP15_3304at 3462.118 kb on - strand, within HP15_3304at 3462.135 kb on + strand, within HP15_3304at 3462.142 kb on - strand, within HP15_3304at 3462.154 kb on + strand, within HP15_3304at 3462.184 kb on - strand, within HP15_3304at 3462.227 kb on + strand, within HP15_3304at 3462.245 kb on + strand, within HP15_3304at 3462.280 kb on + strand, within HP15_3304at 3462.367 kb on + strand, within HP15_3304at 3462.458 kb on + strand, within HP15_3304at 3462.466 kb on - strand, within HP15_3304at 3462.480 kb on - strand, within HP15_3304at 3462.516 kb on - strand, within HP15_3304at 3462.675 kb on - strandat 3462.807 kb on + strand, within HP15_3305at 3462.814 kb on + strand, within HP15_3305

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. pH6.5
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3,460,065 + HP15_3302 0.13 -0.3
3,460,120 + HP15_3302 0.19 +0.3
3,460,174 + HP15_3302 0.25 -0.2
3,460,182 - HP15_3302 0.25 -0.5
3,460,202 + HP15_3302 0.27 +0.2
3,460,202 + HP15_3302 0.27 +1.2
3,460,211 - HP15_3302 0.28 -0.6
3,460,211 - HP15_3302 0.28 +0.5
3,460,277 + HP15_3302 0.35 +0.3
3,460,308 + HP15_3302 0.38 -0.3
3,460,314 + HP15_3302 0.39 -0.8
3,460,314 + HP15_3302 0.39 +0.5
3,460,388 - HP15_3302 0.46 -0.0
3,460,429 - HP15_3302 0.50 +0.2
3,460,456 + HP15_3302 0.53 -0.0
3,460,481 + HP15_3302 0.56 +0.4
3,460,481 + HP15_3302 0.56 -0.6
3,460,482 + HP15_3302 0.56 +0.2
3,460,484 - HP15_3302 0.56 -0.3
3,460,712 - HP15_3302 0.79 -0.5
3,460,716 - HP15_3302 0.79 -0.1
3,460,733 - HP15_3302 0.81 +0.7
3,460,749 - HP15_3302 0.83 +0.8
3,460,905 - -0.4
3,461,121 - HP15_3303 0.15 -0.5
3,461,185 + HP15_3303 0.23 +0.1
3,461,235 + HP15_3303 0.29 +0.4
3,461,238 - HP15_3303 0.29 -1.1
3,461,240 + HP15_3303 0.29 -0.2
3,461,248 - HP15_3303 0.30 -0.4
3,461,248 - HP15_3303 0.30 -0.8
3,461,248 - HP15_3303 0.30 -0.3
3,461,275 + HP15_3303 0.33 -0.1
3,461,283 - HP15_3303 0.34 -0.1
3,461,283 - HP15_3303 0.34 +0.1
3,461,354 + HP15_3303 0.43 -0.8
3,461,398 + HP15_3303 0.48 -0.1
3,461,398 + HP15_3303 0.48 -0.2
3,461,465 + HP15_3303 0.55 +0.2
3,461,513 - HP15_3303 0.61 -0.8
3,461,783 + -0.0
3,461,783 + -0.1
3,461,820 + +1.4
3,461,950 - HP15_3304 0.15 -1.0
3,461,975 + HP15_3304 0.18 +0.0
3,462,037 - HP15_3304 0.26 -0.1
3,462,095 - HP15_3304 0.33 +0.0
3,462,105 + HP15_3304 0.34 -0.1
3,462,110 + HP15_3304 0.35 -0.6
3,462,113 - HP15_3304 0.35 -0.1
3,462,118 - HP15_3304 0.36 +0.8
3,462,118 - HP15_3304 0.36 -0.9
3,462,118 - HP15_3304 0.36 +0.1
3,462,118 - HP15_3304 0.36 -0.7
3,462,135 + HP15_3304 0.38 -0.5
3,462,142 - HP15_3304 0.39 -0.1
3,462,154 + HP15_3304 0.40 +0.1
3,462,184 - HP15_3304 0.44 -0.5
3,462,227 + HP15_3304 0.49 +0.3
3,462,245 + HP15_3304 0.52 -0.3
3,462,280 + HP15_3304 0.56 +0.0
3,462,367 + HP15_3304 0.67 +0.6
3,462,458 + HP15_3304 0.78 +0.2
3,462,466 - HP15_3304 0.79 +0.2
3,462,480 - HP15_3304 0.81 +0.4
3,462,516 - HP15_3304 0.85 +0.2
3,462,675 - +0.0
3,462,807 + HP15_3305 0.26 +0.1
3,462,814 + HP15_3305 0.27 +0.0

Or see this region's nucleotide sequence