Strain Fitness in Shewanella amazonensis SB2B around Sama_1361

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,649,487	-				-1.9
1,649,502	+				-2.2
1,649,503	-				-2.3
1,649,563	+				-4.1
1,649,564	-				-2.3
1,649,593	-				-1.2
1,649,729	+		Sama_1360	0.17	-2.2
1,649,729	+		Sama_1360	0.17	-1.9
1,649,730	-		Sama_1360	0.17	-2.6
1,649,752	+		Sama_1360	0.19	-3.3
1,649,752	+		Sama_1360	0.19	-2.7
1,649,752	+		Sama_1360	0.19	-1.2
1,649,797	+		Sama_1360	0.25	-2.9
1,649,852	+		Sama_1360	0.31	-3.1
1,649,852	+		Sama_1360	0.31	-0.2
1,649,852	+		Sama_1360	0.31	-1.1
1,649,853	-		Sama_1360	0.32	-3.5
1,649,853	-		Sama_1360	0.32	-2.7
1,649,853	-		Sama_1360	0.32	-2.2
1,649,902	+		Sama_1360	0.37	-1.4
1,649,902	+		Sama_1360	0.37	-2.1
1,649,903	-		Sama_1360	0.38	-1.5
1,649,904	+		Sama_1360	0.38	-1.9
1,649,904	+		Sama_1360	0.38	-2.3
1,649,905	-		Sama_1360	0.38	-1.3
1,649,905	-		Sama_1360	0.38	-0.5
1,649,943	+		Sama_1360	0.42	-2.4
1,649,951	-		Sama_1360	0.43	-1.0
1,650,071	+		Sama_1360	0.58	-3.5
1,650,226	+		Sama_1360	0.76	-1.1
1,650,226	+		Sama_1360	0.76	-2.7
1,650,226	+		Sama_1360	0.76	-1.3
1,650,226	+		Sama_1360	0.76	-2.8
1,650,226	+		Sama_1360	0.76	-1.9
1,650,227	-		Sama_1360	0.77	-2.3
1,650,227	-		Sama_1360	0.77	-1.7
1,650,236	+		Sama_1360	0.78	-1.8
1,650,236	+		Sama_1360	0.78	-0.7
1,650,289	+		Sama_1360	0.84	-2.0
1,650,332	+		Sama_1360	0.89	-1.1
1,650,333	-		Sama_1360	0.89	-3.3
1,650,343	-				-3.1
1,650,343	-				-2.6
1,650,358	+				-3.1
1,650,358	+				-0.7
1,650,359	-				-0.3
1,650,421	+				-1.3
1,650,421	+				-1.7
1,650,422	-				-2.1
1,650,433	+				-3.4
1,650,433	+				-2.6
1,650,434	-				-0.5
1,650,434	-				-1.5
1,650,434	-				-1.3
1,650,489	+				-2.7
1,650,504	+				-1.4
1,650,505	-				-4.0
1,650,565	+				-0.0
1,650,566	-				-2.2
1,650,586	+				-3.4
1,650,665	+		Sama_1361	0.14	-1.8
1,650,665	+		Sama_1361	0.14	-2.4
1,650,666	-		Sama_1361	0.15	-3.0
1,650,666	-		Sama_1361	0.15	-3.0
1,650,746	+		Sama_1361	0.20	-2.0
1,650,775	+		Sama_1361	0.21	-1.9
1,650,776	-		Sama_1361	0.21	-2.4
1,650,780	-		Sama_1361	0.22	-2.9
1,650,791	-		Sama_1361	0.22	-1.9
1,651,014	+		Sama_1361	0.36	-3.7
1,651,015	-		Sama_1361	0.36	-2.2
1,651,015	-		Sama_1361	0.36	-2.4
1,651,072	+		Sama_1361	0.40	-2.1
1,651,072	+		Sama_1361	0.40	-2.6
1,651,072	+		Sama_1361	0.40	+0.3
1,651,073	-		Sama_1361	0.40	-2.4
1,651,148	+		Sama_1361	0.45	-3.9
1,651,149	-		Sama_1361	0.45	-1.7
1,651,149	-		Sama_1361	0.45	-1.9
1,651,164	+		Sama_1361	0.46	-2.3
1,651,165	-		Sama_1361	0.46	-2.5
1,651,171	+		Sama_1361	0.46	-2.7
1,651,171	+		Sama_1361	0.46	-3.7
1,651,172	-		Sama_1361	0.46	-3.3
1,651,189	+		Sama_1361	0.47	-1.9
1,651,190	-		Sama_1361	0.47	-2.5
1,651,190	-		Sama_1361	0.47	-1.4
1,651,242	-		Sama_1361	0.50	-3.1
1,651,252	-		Sama_1361	0.51	-2.3
1,651,329	+		Sama_1361	0.56	-1.7
1,651,329	+		Sama_1361	0.56	-1.1
1,651,330	-		Sama_1361	0.56	-0.9
1,651,330	-		Sama_1361	0.56	-1.2
1,651,330	-		Sama_1361	0.56	-1.4
1,651,330	-		Sama_1361	0.56	-3.6
1,651,430	+		Sama_1361	0.62	-1.9
1,651,430	+		Sama_1361	0.62	-4.7
1,651,431	-		Sama_1361	0.62	-1.5
1,651,459	+		Sama_1361	0.64	-2.9
1,651,459	+		Sama_1361	0.64	-1.9
1,651,459	+		Sama_1361	0.64	-1.5
1,651,459	+		Sama_1361	0.64	-3.7
1,651,459	+		Sama_1361	0.64	-1.3
1,651,460	-		Sama_1361	0.64	-1.3
1,651,489	-		Sama_1361	0.66	-2.4
1,651,523	+		Sama_1361	0.68	-1.4
1,651,523	+		Sama_1361	0.68	-1.3
1,651,523	+		Sama_1361	0.68	-0.9
1,651,523	+		Sama_1361	0.68	-1.7
1,651,523	+		Sama_1361	0.68	-4.0
1,651,523	+		Sama_1361	0.68	-1.8
1,651,523	+		Sama_1361	0.68	-3.2
1,651,523	+		Sama_1361	0.68	-2.9
1,651,524	-		Sama_1361	0.68	-1.1
1,651,524	-		Sama_1361	0.68	-1.7
1,651,524	-		Sama_1361	0.68	-2.4
1,651,524	-		Sama_1361	0.68	-0.9
1,651,524	-		Sama_1361	0.68	-2.2
1,651,524	-		Sama_1361	0.68	-2.8
1,651,524	-		Sama_1361	0.68	-1.9
1,651,524	-		Sama_1361	0.68	-2.5
1,651,524	-		Sama_1361	0.68	-1.6
1,651,611	+		Sama_1361	0.73	-1.9
1,651,611	+		Sama_1361	0.73	-2.5
1,651,612	-		Sama_1361	0.73	-1.0
1,651,618	+		Sama_1361	0.74	-2.5
1,651,618	+		Sama_1361	0.74	-2.7
1,651,618	+		Sama_1361	0.74	-3.1
1,651,619	-		Sama_1361	0.74	-2.9
1,651,619	-		Sama_1361	0.74	-2.8
1,651,619	-		Sama_1361	0.74	-0.7
1,651,619	-		Sama_1361	0.74	-2.3
1,651,619	-		Sama_1361	0.74	-3.4
1,651,619	-		Sama_1361	0.74	-0.9
1,651,687	+		Sama_1361	0.78	-1.9
1,651,687	+		Sama_1361	0.78	-1.3
1,651,690	+		Sama_1361	0.78	-2.6
1,651,690	+		Sama_1361	0.78	-3.1
1,651,690	+		Sama_1361	0.78	-1.9
1,651,690	+		Sama_1361	0.78	-2.2
1,651,690	+		Sama_1361	0.78	-1.8
1,651,690	+		Sama_1361	0.78	-1.5
1,651,690	+		Sama_1361	0.78	-1.7
1,651,690	+		Sama_1361	0.78	-2.7
1,651,690	+		Sama_1361	0.78	-1.8
1,651,691	-		Sama_1361	0.78	-2.2
1,651,691	-		Sama_1361	0.78	-3.4
1,651,691	-		Sama_1361	0.78	-2.0
1,651,691	-		Sama_1361	0.78	-0.8
1,651,691	-		Sama_1361	0.78	-0.7
1,651,691	-		Sama_1361	0.78	-2.9
1,651,694	+		Sama_1361	0.78	-1.6
1,651,694	+		Sama_1361	0.78	-2.1
1,651,704	+		Sama_1361	0.79	-2.2
1,651,704	+		Sama_1361	0.79	-0.6
1,651,705	-		Sama_1361	0.79	-1.8
1,651,725	-		Sama_1361	0.80	-2.0
1,651,782	+		Sama_1361	0.84	-3.7
1,651,796	-		Sama_1361	0.85	-2.7
1,651,848	+		Sama_1361	0.88	-2.0
1,651,849	-		Sama_1361	0.88	-1.1
1,651,893	+				-2.4
1,651,946	+				-2.4
1,651,947	-				-2.7
1,651,947	-				-0.9
1,651,947	-				-3.2
1,652,027	+				-3.3
1,652,027	+				-3.8
1,652,028	-				-1.4
1,652,066	+				-1.2
1,652,066	+				-2.8
1,652,126	-				+0.1
1,652,133	-				+0.2
1,652,146	-				-1.2
1,652,158	+				-1.6
1,652,158	+				-2.1
1,652,158	+				-2.3
1,652,159	-				-0.5
1,652,162	+				-1.3
1,652,163	-				-1.2
1,652,171	+				-2.3
1,652,267	-				-1.2
1,652,267	-				-2.4
1,652,278	+		Sama_1362	0.10	-0.5
1,652,279	-		Sama_1362	0.10	-2.2
1,652,279	-		Sama_1362	0.10	-1.9
1,652,341	+		Sama_1362	0.16	-1.9
1,652,343	+		Sama_1362	0.16	-1.8
1,652,343	+		Sama_1362	0.16	-1.7
1,652,344	-		Sama_1362	0.16	-0.2
1,652,344	-		Sama_1362	0.16	-1.2
1,652,344	-		Sama_1362	0.16	-3.7
1,652,407	+		Sama_1362	0.21	-0.7
1,652,407	+		Sama_1362	0.21	-2.6
1,652,407	+		Sama_1362	0.21	-0.3
1,652,414	-		Sama_1362	0.22	-2.0
1,652,414	-		Sama_1362	0.22	-2.0
1,652,414	-		Sama_1362	0.22	-2.5
1,652,440	+		Sama_1362	0.24	-0.3
1,652,440	+		Sama_1362	0.24	-1.5
1,652,440	+		Sama_1362	0.24	-2.7
1,652,440	+		Sama_1362	0.24	-1.5
1,652,440	+		Sama_1362	0.24	-0.0
1,652,441	-		Sama_1362	0.24	-2.9
1,652,441	-		Sama_1362	0.24	-1.3
1,652,441	-		Sama_1362	0.24	-1.7
1,652,441	-		Sama_1362	0.24	-0.5
1,652,441	-		Sama_1362	0.24	-1.9
1,652,441	-		Sama_1362	0.24	-1.4
1,652,441	-		Sama_1362	0.24	-1.3
1,652,484	-		Sama_1362	0.28	-2.1
1,652,484	-		Sama_1362	0.28	-0.3
1,652,515	+		Sama_1362	0.31	-0.7
1,652,516	-		Sama_1362	0.31	+0.8
1,652,516	-		Sama_1362	0.31	-2.3
1,652,516	-		Sama_1362	0.31	-1.5
1,652,516	-		Sama_1362	0.31	-1.7
1,652,516	-		Sama_1362	0.31	-1.8
1,652,516	-		Sama_1362	0.31	-0.0
1,652,526	+		Sama_1362	0.32	-2.5
1,652,526	+		Sama_1362	0.32	-2.0
1,652,526	+		Sama_1362	0.32	-3.4
1,652,527	-		Sama_1362	0.32	-1.4
1,652,527	-		Sama_1362	0.32	-1.6
1,652,528	+		Sama_1362	0.32	-2.9
1,652,529	-		Sama_1362	0.32	-1.0
1,652,529	-		Sama_1362	0.32	-3.0
1,652,534	+		Sama_1362	0.32	+0.6
1,652,534	+		Sama_1362	0.32	-2.2
1,652,534	+		Sama_1362	0.32	-1.7
1,652,631	+		Sama_1362	0.41	-2.5
1,652,632	-		Sama_1362	0.41	-1.8
1,652,649	+		Sama_1362	0.42	-1.9
1,652,650	-		Sama_1362	0.42	-1.7
1,652,655	-		Sama_1362	0.43	-2.1
1,652,697	-		Sama_1362	0.46	-1.1
1,652,753	+		Sama_1362	0.51	-0.7
1,652,800	+		Sama_1362	0.55	-0.7
1,652,801	-		Sama_1362	0.55	-2.5
1,652,809	+		Sama_1362	0.56	-2.3
1,652,809	+		Sama_1362	0.56	-0.1
1,652,809	+		Sama_1362	0.56	-3.0
1,652,809	+		Sama_1362	0.56	-1.5
1,652,809	+		Sama_1362	0.56	-0.6
1,652,809	+		Sama_1362	0.56	-2.5
1,652,809	+		Sama_1362	0.56	-1.4
1,652,809	+		Sama_1362	0.56	-1.3
1,652,810	-		Sama_1362	0.56	-1.6
1,652,810	-		Sama_1362	0.56	+0.6
1,652,810	-		Sama_1362	0.56	-1.7
1,652,810	-		Sama_1362	0.56	-1.3
1,652,810	-		Sama_1362	0.56	-0.6
1,652,810	-		Sama_1362	0.56	-1.2
1,652,810	-		Sama_1362	0.56	-0.7
1,652,810	-		Sama_1362	0.56	-1.8
1,652,810	-		Sama_1362	0.56	+0.5
1,652,861	+		Sama_1362	0.60	-1.3
1,652,863	+		Sama_1362	0.60	-1.2
1,652,863	+		Sama_1362	0.60	-1.7
1,652,863	+		Sama_1362	0.60	-1.4
1,652,864	-		Sama_1362	0.60	-3.5
1,652,864	-		Sama_1362	0.60	-0.2
1,652,864	-		Sama_1362	0.60	-1.3
1,652,902	-		Sama_1362	0.64	-2.1
1,652,977	+		Sama_1362	0.70	-0.7
1,652,977	+		Sama_1362	0.70	-0.6
1,652,977	+		Sama_1362	0.70	-1.1
1,652,978	-		Sama_1362	0.70	-2.0
1,652,978	-		Sama_1362	0.70	-2.6