Strain Fitness in Shewanella amazonensis SB2B around Sama_1131

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,379,125	+		Sama_1129	0.54	+1.0
1,379,141	+		Sama_1129	0.55	+0.6
1,379,142	-		Sama_1129	0.55	+0.4
1,379,142	-		Sama_1129	0.55	-0.4
1,379,142	-		Sama_1129	0.55	-0.6
1,379,159	+		Sama_1129	0.57	-0.0
1,379,205	+		Sama_1129	0.61	-0.1
1,379,205	+		Sama_1129	0.61	-0.8
1,379,206	-		Sama_1129	0.62	-0.3
1,379,206	-		Sama_1129	0.62	+0.2
1,379,206	-		Sama_1129	0.62	+1.1
1,379,206	-		Sama_1129	0.62	-2.4
1,379,206	-		Sama_1129	0.62	+1.4
1,379,209	+		Sama_1129	0.62	-0.5
1,379,209	+		Sama_1129	0.62	-1.0
1,379,209	+		Sama_1129	0.62	+1.0
1,379,236	-		Sama_1129	0.64	+1.0
1,379,463	-		Sama_1129	0.87	-1.0
1,379,508	+				-0.2
1,379,534	+				+0.1
1,379,535	-				-0.8
1,379,535	-				-0.4
1,379,535	-				+0.3
1,379,610	+				+0.7
1,379,611	-				+1.2
1,379,611	-				-0.6
1,379,641	+				+0.7
1,379,641	+				-0.5
1,379,642	-				-2.1
1,379,642	-				-0.3
1,379,647	+				+0.0
1,379,647	+				-0.4
1,379,647	+				+0.5
1,379,647	+				+0.7
1,379,647	+				-1.2
1,379,664	+				+1.1
1,379,665	-				-0.4
1,379,702	-		Sama_1130	0.18	+0.3
1,379,702	-		Sama_1130	0.18	-0.2
1,379,733	+		Sama_1130	0.26	-0.1
1,379,733	+		Sama_1130	0.26	-0.0
1,379,844	+		Sama_1130	0.53	+0.3
1,379,844	+		Sama_1130	0.53	-2.1
1,379,845	-		Sama_1130	0.53	-1.2
1,379,845	-		Sama_1130	0.53	+0.6
1,379,845	-		Sama_1130	0.53	-0.0
1,379,933	+		Sama_1130	0.75	+0.7
1,379,937	+		Sama_1130	0.76	-0.2
1,379,937	+		Sama_1130	0.76	+1.1
1,379,937	+		Sama_1130	0.76	+0.8
1,379,938	-		Sama_1130	0.76	-1.5
1,379,938	-		Sama_1130	0.76	+0.6
1,379,944	+		Sama_1130	0.78	+1.0
1,380,040	+				-0.2
1,380,050	+				+0.6
1,380,128	+				+0.5
1,380,128	+				-0.2
1,380,128	+				+0.0
1,380,128	+				+0.8
1,380,128	+				+0.0
1,380,129	-				-0.7
1,380,155	+		Sama_1131	0.12	+0.1
1,380,155	+		Sama_1131	0.12	+1.2
1,380,155	+		Sama_1131	0.12	-1.9
1,380,155	+		Sama_1131	0.12	+0.8
1,380,155	+		Sama_1131	0.12	-0.1
1,380,155	+		Sama_1131	0.12	+1.4
1,380,156	-		Sama_1131	0.12	+0.6
1,380,156	-		Sama_1131	0.12	-1.1
1,380,159	+		Sama_1131	0.13	-0.4
1,380,159	+		Sama_1131	0.13	+0.3
1,380,159	+		Sama_1131	0.13	+0.4
1,380,159	+		Sama_1131	0.13	+1.9
1,380,159	+		Sama_1131	0.13	+0.9
1,380,160	-		Sama_1131	0.13	+0.9
1,380,160	-		Sama_1131	0.13	-0.1
1,380,160	-		Sama_1131	0.13	+1.4
1,380,160	-		Sama_1131	0.13	+0.4
1,380,160	-		Sama_1131	0.13	+0.8
1,380,223	+		Sama_1131	0.21	+1.4
1,380,223	+		Sama_1131	0.21	-0.1
1,380,223	+		Sama_1131	0.21	+0.7
1,380,223	+		Sama_1131	0.21	-0.0
1,380,223	+		Sama_1131	0.21	+0.1
1,380,262	+		Sama_1131	0.26	+0.8
1,380,263	-		Sama_1131	0.26	+0.7
1,380,323	+		Sama_1131	0.34	-0.5
1,380,324	-		Sama_1131	0.34	-0.5
1,380,324	-		Sama_1131	0.34	+0.4
1,380,339	+		Sama_1131	0.36	+0.3
1,380,339	+		Sama_1131	0.36	-0.7
1,380,339	+		Sama_1131	0.36	+0.3
1,380,362	+		Sama_1131	0.39	+1.2
1,380,363	-		Sama_1131	0.39	+0.5
1,380,461	+		Sama_1131	0.52	+0.0
1,380,461	-		Sama_1131	0.52	+0.3
1,380,462	-		Sama_1131	0.52	+0.7
1,380,462	-		Sama_1131	0.52	-0.3
1,380,485	+		Sama_1131	0.55	-0.1
1,380,486	-		Sama_1131	0.55	-2.0
1,380,514	-		Sama_1131	0.58	-0.1
1,380,584	+		Sama_1131	0.67	+0.1
1,380,584	+		Sama_1131	0.67	+0.7
1,380,584	+		Sama_1131	0.67	+0.3
1,380,585	-		Sama_1131	0.68	+0.2
1,380,585	-		Sama_1131	0.68	+1.1
1,380,585	-		Sama_1131	0.68	+1.9
1,380,605	+		Sama_1131	0.70	+0.4
1,380,605	+		Sama_1131	0.70	-0.6
1,380,605	+		Sama_1131	0.70	+0.3
1,380,605	+		Sama_1131	0.70	+0.7
1,380,605	+		Sama_1131	0.70	+1.7
1,380,606	-		Sama_1131	0.70	-0.5
1,380,606	-		Sama_1131	0.70	-1.8
1,380,606	-		Sama_1131	0.70	+1.6
1,380,606	-		Sama_1131	0.70	+0.3
1,380,617	+		Sama_1131	0.72	+0.3
1,380,618	-		Sama_1131	0.72	+0.1
1,380,618	-		Sama_1131	0.72	-0.7
1,380,618	-		Sama_1131	0.72	-0.6
1,380,827	+				+2.0
1,380,827	+				+0.4
1,380,827	+				-1.8
1,380,827	+				+0.8
1,380,827	+				+0.4
1,380,828	-				+0.6
1,380,902	-				+0.1
1,380,902	-				-0.1
1,381,011	+				+1.1
1,381,033	+				+0.4
1,381,033	+				+0.3
1,381,033	+				-0.5
1,381,033	+				+2.4
1,381,034	-				+0.1
1,381,034	-				-3.1
1,381,086	+				+1.9
1,381,087	-				+0.6
1,381,087	-				-0.5
1,381,093	+				+0.5
1,381,093	+				+0.6
1,381,093	+				+0.3
1,381,093	+				+1.0
1,381,124	+				+0.1
1,381,124	+				+1.1
1,381,125	-				-1.0
1,381,157	+				+1.2
1,381,158	-				-0.8
1,381,172	-				-1.7
1,381,205	+				+0.7
1,381,206	-				+0.0
1,381,247	+				-0.1
1,381,304	+		Sama_1132	0.19	-0.1
1,381,306	+		Sama_1132	0.20	-0.7
1,381,306	+		Sama_1132	0.20	-2.0
1,381,306	+		Sama_1132	0.20	+1.3
1,381,306	+		Sama_1132	0.20	-0.8
1,381,307	-		Sama_1132	0.20	-2.5
1,381,307	-		Sama_1132	0.20	+0.6
1,381,307	-		Sama_1132	0.20	+0.7
1,381,355	-		Sama_1132	0.30	+0.4
1,381,427	+		Sama_1132	0.46	-1.1
1,381,428	-		Sama_1132	0.46	-1.1
1,381,455	-		Sama_1132	0.52	-1.3
1,381,473	-		Sama_1132	0.56	-1.0
1,381,473	-		Sama_1132	0.56	-1.8
1,381,502	+		Sama_1132	0.62	-0.6
1,381,547	-		Sama_1132	0.72	-3.3
1,381,617	+		Sama_1132	0.87	-0.5
1,381,676	+				-0.5
1,381,676	+				-1.5
1,381,748	+				-1.0
1,381,748	+				-3.2
1,381,749	-				-2.2
1,381,772	+				-0.6
1,381,782	+				+0.5
1,381,783	-				+1.6
1,381,783	-				-2.3
1,381,783	-				-0.3
1,381,785	+				-1.6
1,381,786	-				+0.9
1,381,786	-				-2.4