Strain Fitness in Shewanella amazonensis SB2B around Sama_0990

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,197,040	+		Sama_0988	0.44	-1.4
1,197,040	+		Sama_0988	0.44	+1.0
1,197,040	+		Sama_0988	0.44	-0.3
1,197,041	-		Sama_0988	0.44	-0.4
1,197,041	-		Sama_0988	0.44	-0.8
1,197,041	-		Sama_0988	0.44	-0.2
1,197,041	-		Sama_0988	0.44	-0.6
1,197,067	+		Sama_0988	0.46	+0.5
1,197,067	+		Sama_0988	0.46	+0.7
1,197,068	-		Sama_0988	0.46	-0.6
1,197,078	+		Sama_0988	0.47	-0.7
1,197,079	-		Sama_0988	0.47	-0.4
1,197,079	-		Sama_0988	0.47	+0.0
1,197,102	+		Sama_0988	0.49	-1.4
1,197,103	-		Sama_0988	0.49	+0.2
1,197,387	+		Sama_0988	0.73	-0.4
1,197,387	+		Sama_0988	0.73	-0.7
1,197,387	+		Sama_0988	0.73	+0.2
1,197,387	+		Sama_0988	0.73	-0.4
1,197,388	-		Sama_0988	0.74	+1.0
1,197,388	-		Sama_0988	0.74	-0.8
1,197,388	-		Sama_0988	0.74	-1.7
1,197,388	-		Sama_0988	0.74	-0.8
1,197,515	-		Sama_0988	0.84	+2.1
1,197,545	+		Sama_0988	0.87	-1.3
1,197,584	+				+0.1
1,197,584	+				-0.3
1,197,584	+				+0.7
1,197,605	+				-2.2
1,197,605	+				-0.8
1,197,605	+				-0.7
1,197,606	-				+0.7
1,197,614	+				-0.2
1,197,614	+				+1.4
1,197,614	+				+0.7
1,197,615	-				+0.6
1,197,615	-				+0.2
1,197,615	-				-0.2
1,197,632	+				+0.9
1,197,779	+		Sama_0989	0.38	-0.0
1,197,791	+		Sama_0989	0.45	+0.6
1,197,792	-		Sama_0989	0.45	+1.3
1,197,818	+		Sama_0989	0.61	-0.1
1,197,826	-		Sama_0989	0.66	-0.2
1,197,833	+		Sama_0989	0.70	+1.0
1,197,834	-		Sama_0989	0.71	-0.9
1,197,916	-				+2.1
1,197,974	-				-2.3
1,198,019	-				+0.2
1,198,019	-				-1.0
1,198,029	+				+1.5
1,198,029	+				+1.2
1,198,089	+		Sama_0990	0.23	+1.2
1,198,089	+		Sama_0990	0.23	-0.5
1,198,089	+		Sama_0990	0.23	+2.1
1,198,089	+		Sama_0990	0.23	+1.2
1,198,089	+		Sama_0990	0.23	+0.6
1,198,089	+		Sama_0990	0.23	+0.7
1,198,089	+		Sama_0990	0.23	-0.2
1,198,089	+		Sama_0990	0.23	+0.5
1,198,089	+		Sama_0990	0.23	-0.2
1,198,089	+		Sama_0990	0.23	-0.0
1,198,089	+		Sama_0990	0.23	+0.3
1,198,089	+		Sama_0990	0.23	+0.3
1,198,089	+		Sama_0990	0.23	-0.0
1,198,089	+		Sama_0990	0.23	+1.0
1,198,089	+		Sama_0990	0.23	+0.5
1,198,089	+		Sama_0990	0.23	-0.4
1,198,090	-		Sama_0990	0.23	+1.4
1,198,090	-		Sama_0990	0.23	+0.2
1,198,090	-		Sama_0990	0.23	+1.3
1,198,090	-		Sama_0990	0.23	-0.8
1,198,090	-		Sama_0990	0.23	-0.1
1,198,090	-		Sama_0990	0.23	+1.8
1,198,090	-		Sama_0990	0.23	-0.6
1,198,090	-		Sama_0990	0.23	-1.0
1,198,090	-		Sama_0990	0.23	-1.0
1,198,090	-		Sama_0990	0.23	+1.0
1,198,090	-		Sama_0990	0.23	-0.5
1,198,090	-		Sama_0990	0.23	-1.0
1,198,090	-		Sama_0990	0.23	-0.4
1,198,096	+		Sama_0990	0.24	+0.6
1,198,096	+		Sama_0990	0.24	+0.9
1,198,097	-		Sama_0990	0.25	-1.0
1,198,097	-		Sama_0990	0.25	+0.7
1,198,097	-		Sama_0990	0.25	-0.7
1,198,111	-		Sama_0990	0.28	-0.3
1,198,143	+		Sama_0990	0.35	+0.9
1,198,186	-		Sama_0990	0.46	+1.2
1,198,186	-		Sama_0990	0.46	+1.7
1,198,218	+		Sama_0990	0.53	-0.8
1,198,218	+		Sama_0990	0.53	+0.6
1,198,428	+				+2.8
1,198,428	+				+0.0
1,198,429	-				+1.0
1,198,448	+				-1.2
1,198,448	+				+0.4
1,198,448	+				-0.9
1,198,448	+				+2.8
1,198,448	+				-2.3
1,198,448	+				-3.3
1,198,448	+				-1.7
1,198,448	+				-0.3
1,198,448	+				-0.3
1,198,449	-				-0.4
1,198,449	-				+0.6
1,198,449	-				+0.1
1,198,449	-				+0.3
1,198,449	-				-0.1
1,198,449	-				-0.3
1,198,449	-				-0.3
1,198,449	-				-0.5
1,198,449	-				-0.6
1,198,450	+				+0.3
1,198,450	+				+0.7
1,198,451	-				+0.3
1,198,451	-				-0.1
1,198,451	-				+0.4
1,198,490	+				-0.5
1,198,490	+				-1.3
1,198,490	+				-2.6
1,198,491	-				-0.0
1,198,491	-				-0.1
1,198,514	-				-1.7
1,198,614	+				-0.8
1,198,614	+				-0.5
1,198,643	-		Sama_0991	0.11	-0.2
1,198,643	-		Sama_0991	0.11	-1.0
1,198,643	-		Sama_0991	0.11	+0.2
1,198,643	-		Sama_0991	0.11	+1.2
1,198,643	-		Sama_0991	0.11	-1.9
1,198,651	+		Sama_0991	0.11	-0.2
1,198,651	+		Sama_0991	0.11	+0.2
1,198,652	-		Sama_0991	0.11	+1.2
1,198,688	+		Sama_0991	0.13	+0.1
1,198,703	+		Sama_0991	0.14	+1.7
1,198,704	-		Sama_0991	0.14	+0.4
1,198,704	-		Sama_0991	0.14	+0.5
1,198,723	-		Sama_0991	0.15	-1.8
1,198,733	-		Sama_0991	0.16	-0.2
1,198,733	-		Sama_0991	0.16	-0.2
1,198,860	+		Sama_0991	0.23	-0.5
1,198,861	-		Sama_0991	0.23	+0.4
1,198,861	-		Sama_0991	0.23	-1.3
1,198,894	+		Sama_0991	0.25	+0.8
1,198,895	-		Sama_0991	0.25	-2.0
1,198,895	-		Sama_0991	0.25	-2.3
1,198,969	+		Sama_0991	0.29	-1.0
1,198,969	+		Sama_0991	0.29	-0.6
1,198,969	+		Sama_0991	0.29	+1.6
1,199,057	+		Sama_0991	0.34	+0.4
1,199,058	-		Sama_0991	0.34	+0.7
1,199,058	-		Sama_0991	0.34	+0.5
1,199,059	+		Sama_0991	0.34	-0.5
1,199,060	-		Sama_0991	0.35	-2.2
1,199,060	-		Sama_0991	0.35	-0.5
1,199,060	-		Sama_0991	0.35	-0.7
1,199,094	-		Sama_0991	0.36	+0.7
1,199,124	+		Sama_0991	0.38	-0.3
1,199,125	-		Sama_0991	0.38	-0.2
1,199,164	+		Sama_0991	0.40	+0.5
1,199,164	+		Sama_0991	0.40	-1.1
1,199,164	+		Sama_0991	0.40	+0.3
1,199,165	-		Sama_0991	0.40	+0.1
1,199,165	-		Sama_0991	0.40	-0.1
1,199,184	+		Sama_0991	0.42	-0.9
1,199,184	+		Sama_0991	0.42	-2.0
1,199,184	+		Sama_0991	0.42	+0.1
1,199,184	+		Sama_0991	0.42	-0.8
1,199,185	-		Sama_0991	0.42	-0.2
1,199,187	-		Sama_0991	0.42	-0.8
1,199,204	+		Sama_0991	0.43	-0.3
1,199,285	-		Sama_0991	0.47	+0.9
1,199,290	+		Sama_0991	0.48	+1.9
1,199,290	+		Sama_0991	0.48	-1.3
1,199,290	+		Sama_0991	0.48	-0.3
1,199,290	+		Sama_0991	0.48	-0.5
1,199,291	-		Sama_0991	0.48	-0.6
1,199,291	-		Sama_0991	0.48	+0.3
1,199,291	-		Sama_0991	0.48	-1.3
1,199,291	-		Sama_0991	0.48	-0.3
1,199,291	-		Sama_0991	0.48	+0.2
1,199,393	+		Sama_0991	0.53	+0.2
1,199,393	+		Sama_0991	0.53	-0.4
1,199,393	+		Sama_0991	0.53	-1.3
1,199,393	+		Sama_0991	0.53	+0.5
1,199,394	-		Sama_0991	0.53	-0.1