Strain Fitness in Shewanella amazonensis SB2B around Sama_0979

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,182,109	+				-2.9
1,182,109	+				-3.6
1,182,109	+				-3.6
1,182,110	-				-4.7
1,182,204	+		Sama_0978	0.18	-4.0
1,182,204	+		Sama_0978	0.18	-1.7
1,182,205	-		Sama_0978	0.18	-1.5
1,182,363	-		Sama_0978	0.35	-2.3
1,182,363	-		Sama_0978	0.35	-4.6
1,182,384	+		Sama_0978	0.37	-2.0
1,182,405	+		Sama_0978	0.39	-3.6
1,182,405	+		Sama_0978	0.39	-3.9
1,182,406	-		Sama_0978	0.39	-3.2
1,182,540	+		Sama_0978	0.54	-1.8
1,182,543	+		Sama_0978	0.54	-3.3
1,182,543	+		Sama_0978	0.54	-2.4
1,182,543	+		Sama_0978	0.54	-3.9
1,182,605	+		Sama_0978	0.60	-1.5
1,182,606	-		Sama_0978	0.60	-1.8
1,182,726	+		Sama_0978	0.73	-4.3
1,182,726	+		Sama_0978	0.73	-1.9
1,182,726	+		Sama_0978	0.73	-1.7
1,182,727	-		Sama_0978	0.73	-3.7
1,182,727	-		Sama_0978	0.73	-2.7
1,182,805	+		Sama_0978	0.81	-2.2
1,182,805	+		Sama_0978	0.81	-2.3
1,182,806	-		Sama_0978	0.81	-2.7
1,182,810	+		Sama_0978	0.82	-0.9
1,182,813	+		Sama_0978	0.82	-2.8
1,182,814	-		Sama_0978	0.82	-4.0
1,182,814	-		Sama_0978	0.82	-2.1
1,182,855	+		Sama_0978	0.87	-4.7
1,182,856	-		Sama_0978	0.87	-4.6
1,182,857	+		Sama_0978	0.87	-2.6
1,182,857	+		Sama_0978	0.87	-2.8
1,182,857	+		Sama_0978	0.87	-2.0
1,182,857	+		Sama_0978	0.87	-4.7
1,182,857	+		Sama_0978	0.87	-2.0
1,182,857	+		Sama_0978	0.87	-4.7
1,182,857	+		Sama_0978	0.87	-2.8
1,182,857	+		Sama_0978	0.87	-3.5
1,182,857	+		Sama_0978	0.87	-3.8
1,182,858	-		Sama_0978	0.87	-2.3
1,182,858	-		Sama_0978	0.87	-2.6
1,182,858	-		Sama_0978	0.87	-1.2
1,182,858	-		Sama_0978	0.87	-3.4
1,182,858	-		Sama_0978	0.87	-1.8
1,182,858	-		Sama_0978	0.87	-2.5
1,182,886	-		Sama_0978	0.90	-3.5
1,182,933	+				-2.6
1,182,999	-				-0.7
1,183,046	+				+1.3
1,183,047	-				-0.2
1,183,047	-				-0.6
1,183,146	+				+0.6
1,183,147	-				+0.0
1,183,147	-				-1.6
1,183,180	+		Sama_0979	0.11	+0.4
1,183,180	+		Sama_0979	0.11	-1.7
1,183,259	+		Sama_0979	0.19	+1.0
1,183,265	+		Sama_0979	0.20	+0.1
1,183,316	+		Sama_0979	0.25	-1.8
1,183,317	-		Sama_0979	0.25	-0.8
1,183,317	-		Sama_0979	0.25	-0.5
1,183,317	-		Sama_0979	0.25	-2.2
1,183,317	-		Sama_0979	0.25	+0.2
1,183,317	-		Sama_0979	0.25	-0.4
1,183,317	-		Sama_0979	0.25	+0.8
1,183,317	-		Sama_0979	0.25	-0.4
1,183,348	+		Sama_0979	0.28	-0.5
1,183,407	+		Sama_0979	0.34	-0.2
1,183,407	+		Sama_0979	0.34	+0.5
1,183,417	-		Sama_0979	0.35	-1.2
1,183,417	-		Sama_0979	0.35	+0.9
1,183,458	+		Sama_0979	0.39	+0.6
1,183,458	+		Sama_0979	0.39	-0.1
1,183,458	+		Sama_0979	0.39	+0.4
1,183,515	-		Sama_0979	0.45	+0.2
1,183,545	+		Sama_0979	0.48	+0.1
1,183,572	+		Sama_0979	0.51	+0.0
1,183,572	+		Sama_0979	0.51	+0.1
1,183,572	+		Sama_0979	0.51	+2.0
1,183,573	-		Sama_0979	0.51	+0.6
1,183,656	-		Sama_0979	0.60	-0.9
1,183,660	-		Sama_0979	0.60	-0.3
1,183,699	+		Sama_0979	0.64	-0.7
1,183,700	-		Sama_0979	0.64	-0.3
1,183,700	-		Sama_0979	0.64	-0.5
1,183,720	+		Sama_0979	0.66	+0.2
1,183,721	-		Sama_0979	0.66	+0.1
1,183,746	+		Sama_0979	0.69	+2.4
1,183,746	+		Sama_0979	0.69	+0.2
1,183,769	+		Sama_0979	0.71	+1.5
1,183,770	-		Sama_0979	0.71	+0.4
1,183,795	+		Sama_0979	0.74	+1.4
1,183,795	+		Sama_0979	0.74	+0.4
1,183,796	-		Sama_0979	0.74	-0.7
1,183,813	+		Sama_0979	0.76	-0.3
1,183,831	+		Sama_0979	0.78	-0.2
1,183,832	-		Sama_0979	0.78	+1.2
1,183,900	+		Sama_0979	0.85	-0.5
1,183,937	+		Sama_0979	0.88	-0.8
1,183,937	+		Sama_0979	0.88	-0.3
1,183,995	+				-1.9
1,183,996	-				-0.8
1,184,020	+				+0.8
1,184,111	+				-0.6
1,184,111	+				+0.4
1,184,111	+				-1.3
1,184,112	-				-1.7
1,184,120	+				+1.0
1,184,120	+				+0.1
1,184,121	-				+0.3
1,184,121	-				-0.3
1,184,121	-				+0.8
1,184,177	+				+0.1
1,184,177	+				-2.0
1,184,177	+				-1.7
1,184,178	-				+0.1
1,184,178	-				-1.9
1,184,178	-				-2.2
1,184,178	-				-2.3
1,184,183	+				-0.3
1,184,183	+				+0.6
1,184,183	+				-0.4
1,184,183	+				-0.5
1,184,183	+				+1.1
1,184,183	+				-0.3
1,184,183	+				-0.2
1,184,183	+				+0.2
1,184,183	+				-0.1
1,184,183	+				+0.7
1,184,183	+				-0.9
1,184,184	-				+0.2
1,184,184	-				-0.7
1,184,184	-				+0.3
1,184,184	-				-0.7
1,184,184	-				+0.7
1,184,184	-				-0.7
1,184,184	-				-0.1
1,184,184	-				+0.3
1,184,184	-				-0.3
1,184,184	-				-0.2
1,184,184	-				+1.0
1,184,184	-				+0.3
1,184,263	+				-0.1
1,184,275	+				-0.3
1,184,346	-		Sama_0980	0.12	+0.8
1,184,366	+		Sama_0980	0.13	-1.3
1,184,366	+		Sama_0980	0.13	-0.2
1,184,366	+		Sama_0980	0.13	+1.4
1,184,366	+		Sama_0980	0.13	+1.1
1,184,366	+		Sama_0980	0.13	+0.3
1,184,366	+		Sama_0980	0.13	+1.5
1,184,366	+		Sama_0980	0.13	+0.7
1,184,367	-		Sama_0980	0.13	-0.3
1,184,367	-		Sama_0980	0.13	-2.6
1,184,367	-		Sama_0980	0.13	+0.8
1,184,367	-		Sama_0980	0.13	-0.7
1,184,367	-		Sama_0980	0.13	-0.4
1,184,367	-		Sama_0980	0.13	+0.3
1,184,391	+		Sama_0980	0.14	-1.7
1,184,391	+		Sama_0980	0.14	+1.2
1,184,391	+		Sama_0980	0.14	+0.4
1,184,392	-		Sama_0980	0.14	+0.2
1,184,392	-		Sama_0980	0.14	-0.9
1,184,392	-		Sama_0980	0.14	-0.1
1,184,424	-		Sama_0980	0.15	+0.2
1,184,424	-		Sama_0980	0.15	+0.0
1,184,436	-		Sama_0980	0.16	-0.0
1,184,436	-		Sama_0980	0.16	+1.1
1,184,450	+		Sama_0980	0.16	+0.1
1,184,479	+		Sama_0980	0.18	-1.5
1,184,479	+		Sama_0980	0.18	-0.2
1,184,480	-		Sama_0980	0.18	-1.7
1,184,480	-		Sama_0980	0.18	-1.5
1,184,480	-		Sama_0980	0.18	+0.8
1,184,481	+		Sama_0980	0.18	+0.7
1,184,481	+		Sama_0980	0.18	+0.3
1,184,481	+		Sama_0980	0.18	+0.3
1,184,481	+		Sama_0980	0.18	-1.8
1,184,482	-		Sama_0980	0.18	-0.8
1,184,482	-		Sama_0980	0.18	+0.3
1,184,482	-		Sama_0980	0.18	-0.9
1,184,482	-		Sama_0980	0.18	-0.6
1,184,522	+		Sama_0980	0.19	+0.6
1,184,522	+		Sama_0980	0.19	-3.3
1,184,522	+		Sama_0980	0.19	-1.6
1,184,523	-		Sama_0980	0.19	-0.0
1,184,598	-		Sama_0980	0.23	+0.8
1,184,604	+		Sama_0980	0.23	-1.2
1,184,605	-		Sama_0980	0.23	-0.4
1,184,651	-		Sama_0980	0.25	+0.1
1,184,769	-		Sama_0980	0.30	-0.1
1,184,769	-		Sama_0980	0.30	+0.2
1,184,873	-		Sama_0980	0.34	-0.3
1,184,896	+		Sama_0980	0.35	-0.1
1,184,897	-		Sama_0980	0.35	-0.0
1,184,897	-		Sama_0980	0.35	+0.6
1,184,903	+		Sama_0980	0.35	+0.7
1,184,904	-		Sama_0980	0.35	+0.3
1,184,904	-		Sama_0980	0.35	+0.4
1,184,912	+		Sama_0980	0.36	-0.1
1,184,912	+		Sama_0980	0.36	-1.7
1,184,912	+		Sama_0980	0.36	+0.8
1,184,912	+		Sama_0980	0.36	+1.3
1,184,913	-		Sama_0980	0.36	-0.3
1,184,913	-		Sama_0980	0.36	-0.2
1,184,948	+		Sama_0980	0.37	+1.9
1,184,949	-		Sama_0980	0.37	+0.3
1,185,040	+		Sama_0980	0.41	-0.0
1,185,041	-		Sama_0980	0.41	+0.5
1,185,041	-		Sama_0980	0.41	-3.1
1,185,041	-		Sama_0980	0.41	-0.6