Strain Fitness in Shewanella amazonensis SB2B around Sama_0076

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
80,840	+		Sama_0075	0.42	-0.5
80,840	+		Sama_0075	0.42	-1.4
80,840	+		Sama_0075	0.42	-0.6
80,840	+		Sama_0075	0.42	-0.1
80,840	+		Sama_0075	0.42	-0.7
80,840	+		Sama_0075	0.42	+0.6
80,840	+		Sama_0075	0.42	-0.2
80,841	-		Sama_0075	0.42	+1.1
80,841	-		Sama_0075	0.42	+0.4
80,841	-		Sama_0075	0.42	-2.4
80,841	-		Sama_0075	0.42	+0.9
80,841	-		Sama_0075	0.42	+0.8
80,842	+		Sama_0075	0.42	+0.1
80,842	+		Sama_0075	0.42	-0.0
80,842	+		Sama_0075	0.42	-1.2
80,842	+		Sama_0075	0.42	+0.1
80,842	+		Sama_0075	0.42	+0.7
80,843	-		Sama_0075	0.42	+0.2
80,843	-		Sama_0075	0.42	+0.5
80,843	-		Sama_0075	0.42	+0.0
80,908	+		Sama_0075	0.48	-0.7
80,920	+		Sama_0075	0.49	-2.3
80,920	+		Sama_0075	0.49	+0.1
80,920	+		Sama_0075	0.49	-1.4
80,921	-		Sama_0075	0.49	-1.2
80,921	-		Sama_0075	0.49	-0.6
80,921	-		Sama_0075	0.49	+0.5
80,921	-		Sama_0075	0.49	-0.4
80,921	-		Sama_0075	0.49	+0.5
81,046	+		Sama_0075	0.59	-0.5
81,046	+		Sama_0075	0.59	-0.6
81,046	+		Sama_0075	0.59	+0.8
81,046	+		Sama_0075	0.59	-0.1
81,046	+		Sama_0075	0.59	+1.3
81,046	+		Sama_0075	0.59	+0.3
81,046	+		Sama_0075	0.59	+0.1
81,046	+		Sama_0075	0.59	+0.8
81,047	-		Sama_0075	0.59	-1.9
81,047	-		Sama_0075	0.59	-0.4
81,047	-		Sama_0075	0.59	+0.3
81,047	-		Sama_0075	0.59	+0.5
81,047	-		Sama_0075	0.59	+0.5
81,047	-		Sama_0075	0.59	-0.0
81,047	-		Sama_0075	0.59	+0.6
81,047	-		Sama_0075	0.59	+0.9
81,047	-		Sama_0075	0.59	+0.3
81,077	+		Sama_0075	0.62	-0.4
81,077	+		Sama_0075	0.62	+0.3
81,077	+		Sama_0075	0.62	-2.3
81,077	+		Sama_0075	0.62	-0.1
81,077	+		Sama_0075	0.62	-0.3
81,077	+		Sama_0075	0.62	+0.9
81,077	+		Sama_0075	0.62	+0.3
81,077	+		Sama_0075	0.62	-0.4
81,078	-		Sama_0075	0.62	-1.1
81,078	-		Sama_0075	0.62	-1.6
81,078	-		Sama_0075	0.62	+0.2
81,078	-		Sama_0075	0.62	+0.1
81,078	-		Sama_0075	0.62	-0.0
81,078	-		Sama_0075	0.62	+0.8
81,078	-		Sama_0075	0.62	+0.2
81,078	-		Sama_0075	0.62	-0.4
81,078	-		Sama_0075	0.62	-0.1
81,078	-		Sama_0075	0.62	-1.0
81,078	-		Sama_0075	0.62	+0.7
81,078	-		Sama_0075	0.62	+0.5
81,080	+		Sama_0075	0.62	-0.1
81,080	+		Sama_0075	0.62	+1.1
81,080	+		Sama_0075	0.62	+0.4
81,080	+		Sama_0075	0.62	+0.6
81,080	+		Sama_0075	0.62	-0.4
81,080	+		Sama_0075	0.62	+0.6
81,080	+		Sama_0075	0.62	+0.3
81,080	+		Sama_0075	0.62	-0.4
81,080	+		Sama_0075	0.62	-1.4
81,080	+		Sama_0075	0.62	+1.1
81,080	+		Sama_0075	0.62	-0.3
81,080	+		Sama_0075	0.62	+1.1
81,081	-		Sama_0075	0.62	-0.1
81,081	-		Sama_0075	0.62	+0.0
81,081	-		Sama_0075	0.62	-1.6
81,081	-		Sama_0075	0.62	+0.8
81,081	-		Sama_0075	0.62	-0.6
81,081	-		Sama_0075	0.62	-0.3
81,081	-		Sama_0075	0.62	+0.6
81,081	-		Sama_0075	0.62	-0.8
81,081	-		Sama_0075	0.62	+0.0
81,081	-		Sama_0075	0.62	+0.3
81,081	-		Sama_0075	0.62	-1.3
81,081	-		Sama_0075	0.62	-0.7
81,117	+		Sama_0075	0.65	-0.3
81,118	-		Sama_0075	0.65	+0.5
81,118	-		Sama_0075	0.65	-1.7
81,142	+		Sama_0075	0.67	-0.5
81,142	+		Sama_0075	0.67	+2.0
81,142	+		Sama_0075	0.67	-2.2
81,142	+		Sama_0075	0.67	+0.7
81,142	+		Sama_0075	0.67	-3.0
81,142	+		Sama_0075	0.67	-1.0
81,142	+		Sama_0075	0.67	+0.5
81,142	+		Sama_0075	0.67	+0.2
81,143	-		Sama_0075	0.67	+0.7
81,143	-		Sama_0075	0.67	+0.4
81,143	-		Sama_0075	0.67	+0.8
81,143	-		Sama_0075	0.67	+2.8
81,183	+		Sama_0075	0.71	-0.4
81,183	+		Sama_0075	0.71	-0.5
81,184	-		Sama_0075	0.71	+0.3
81,203	+		Sama_0075	0.72	+1.0
81,203	+		Sama_0075	0.72	-0.4
81,203	+		Sama_0075	0.72	-1.1
81,203	+		Sama_0075	0.72	+0.1
81,204	-		Sama_0075	0.72	-0.2
81,204	-		Sama_0075	0.72	-0.5
81,227	+		Sama_0075	0.74	-0.0
81,227	+		Sama_0075	0.74	+0.5
81,227	+		Sama_0075	0.74	-1.3
81,228	-		Sama_0075	0.74	+0.7
81,261	+		Sama_0075	0.77	+1.1
81,261	+		Sama_0075	0.77	-0.1
81,262	-		Sama_0075	0.77	-1.3
81,262	-		Sama_0075	0.77	-0.2
81,328	+		Sama_0075	0.83	-0.8
81,328	+		Sama_0075	0.83	+0.1
81,328	+		Sama_0075	0.83	+0.1
81,329	-		Sama_0075	0.83	-0.9
81,329	-		Sama_0075	0.83	+1.6
81,329	-		Sama_0075	0.83	-0.4
81,329	-		Sama_0075	0.83	+0.4
81,329	-		Sama_0075	0.83	-0.2
81,355	+		Sama_0075	0.85	-0.2
81,355	+		Sama_0075	0.85	-0.2
81,356	-		Sama_0075	0.85	-0.7
81,356	-		Sama_0075	0.85	+0.4
81,464	+				-1.4
81,465	-				-0.5
81,533	+				-0.9
81,533	+				-0.1
81,533	+				-0.6
81,534	-				-0.4
81,534	-				+1.8
81,534	-				-0.3
81,536	+				+0.2
81,536	+				-3.0
81,536	+				+0.4
81,536	+				+0.8
81,536	+				+0.6
81,536	+				+0.0
81,537	-				+0.9
81,537	-				-0.0
81,537	-				-0.6
81,537	-				+0.1
81,537	-				-0.1
81,537	-				+1.7
81,537	-				-0.8
81,537	-				-1.1
81,537	-				-0.9
81,537	-				+0.2
81,538	+				+0.9
81,538	+				-0.1
81,538	+				-0.5
81,538	+				-0.2
81,538	+				+0.2
81,538	+				+0.1
81,538	+				+0.4
81,538	+				-0.2
81,538	+				+0.1
81,538	+				+1.4
81,539	-				-0.0
81,539	-				+0.9
81,539	-				-0.3
81,539	-				-0.3
81,539	-				-0.7
81,539	-				-0.4
81,539	-				-0.0
81,568	+				-0.5
81,568	+				-0.5
81,568	+				-0.2
81,568	+				-0.5
81,569	-				-0.2
81,569	-				+0.1
81,576	+				-0.4
81,577	-				+0.6
81,577	-				-0.4
81,642	-				-0.4
81,655	+				+0.3
81,655	+				+0.1
81,656	-				-1.9
81,731	+				-0.2
81,732	-				-0.5
81,732	-				-0.3
81,732	-				-0.6
81,732	-				-0.8
81,780	+				+0.2
81,780	+				-1.3
81,780	+				+2.2
81,780	+				+0.4
81,781	-				+0.8
81,804	+				+0.7
81,804	+				-1.4
81,804	+				-0.4
81,805	-				-1.0
81,805	-				+0.7
81,875	+				-0.4
81,875	+				-0.3
81,875	+				+1.4
81,875	+				+0.6
81,876	-				-1.3
82,117	+		Sama_0076	0.33	+0.1
82,117	+		Sama_0076	0.33	-2.2
82,117	+		Sama_0076	0.33	-1.0
82,117	+		Sama_0076	0.33	-0.8
82,117	+		Sama_0076	0.33	+0.0
82,118	-		Sama_0076	0.33	+0.4
82,118	-		Sama_0076	0.33	+0.5
82,195	+		Sama_0076	0.42	+0.0
82,195	+		Sama_0076	0.42	-0.5
82,195	+		Sama_0076	0.42	-3.0
82,195	+		Sama_0076	0.42	-1.2
82,219	-		Sama_0076	0.45	-0.6
82,239	+		Sama_0076	0.47	-0.3
82,240	-		Sama_0076	0.47	+0.7
82,240	-		Sama_0076	0.47	-0.2
82,240	-		Sama_0076	0.47	+0.3
82,312	+		Sama_0076	0.55	-0.1
82,313	-		Sama_0076	0.55	-0.5
82,360	+		Sama_0076	0.61	-0.6
82,360	+		Sama_0076	0.61	+0.7
82,360	+		Sama_0076	0.61	-1.5
82,360	+		Sama_0076	0.61	+0.8
82,360	+		Sama_0076	0.61	-1.3
82,361	-		Sama_0076	0.61	-2.7
82,361	-		Sama_0076	0.61	+0.5
82,361	-		Sama_0076	0.61	-1.1
82,361	-		Sama_0076	0.61	-1.3
82,361	-		Sama_0076	0.61	-1.8
82,362	+		Sama_0076	0.61	-2.4
82,432	+		Sama_0076	0.69	-0.2
82,432	+		Sama_0076	0.69	-2.1
82,432	+		Sama_0076	0.69	-1.0
82,433	-		Sama_0076	0.69	-0.8
82,437	+		Sama_0076	0.70	-0.1
82,447	+		Sama_0076	0.71	-0.2
82,448	-		Sama_0076	0.71	-0.2
82,450	+		Sama_0076	0.71	+1.2
82,450	+		Sama_0076	0.71	-1.5
82,450	+		Sama_0076	0.71	-0.3
82,450	+		Sama_0076	0.71	-0.8
82,450	+		Sama_0076	0.71	+0.1
82,450	+		Sama_0076	0.71	-1.6
82,450	+		Sama_0076	0.71	-0.7
82,450	+		Sama_0076	0.71	+0.9
82,450	+		Sama_0076	0.71	-1.7
82,450	+		Sama_0076	0.71	-1.9
82,451	-		Sama_0076	0.71	-1.3
82,451	-		Sama_0076	0.71	+0.7
82,451	-		Sama_0076	0.71	+0.0
82,451	-		Sama_0076	0.71	+0.6
82,451	-		Sama_0076	0.71	-1.2
82,451	-		Sama_0076	0.71	-0.3
82,552	+		Sama_0076	0.83	+0.1
82,553	-		Sama_0076	0.83	-1.0
82,553	-		Sama_0076	0.83	-0.4
82,562	+		Sama_0076	0.84	+1.0
82,562	+		Sama_0076	0.84	-0.3
82,562	+		Sama_0076	0.84	+0.1
82,562	+		Sama_0076	0.84	-0.4
82,563	-		Sama_0076	0.84	+0.3
82,563	-		Sama_0076	0.84	-0.5
82,563	-		Sama_0076	0.84	-1.9
82,563	-		Sama_0076	0.84	-0.8
82,563	-		Sama_0076	0.84	-0.6
82,563	-		Sama_0076	0.84	+0.5
82,605	+		Sama_0076	0.89	-1.4
82,606	-		Sama_0076	0.89	+0.4
82,632	-				+1.0
82,653	+				-0.1
82,653	+				+0.6
82,654	-				+0.7
82,654	-				-0.5
82,654	-				+0.1
82,669	+				+0.5
82,669	+				+0.1
82,670	-				-0.3
82,670	-				-2.6
82,670	-				+1.3
82,682	+				+0.7
82,682	+				-0.2
82,682	+				-0.4
82,682	+				-0.5
82,682	+				+0.4
82,682	+				-0.1
82,682	+				+0.2
82,682	+				-1.5
82,682	+				-0.2
82,682	+				+0.5
82,682	+				+0.3
82,682	+				-1.4
82,682	+				-0.7
82,683	-				-0.7
82,683	-				-0.1
82,683	-				-1.8
82,683	-				+0.0
82,683	-				+0.3
82,683	-				-0.4
82,683	-				+1.0
82,683	-				+0.8
82,683	-				-0.4
82,683	-				+2.1
82,683	-				-1.5
82,683	-				-1.1
82,683	-				-0.9
82,683	-				-0.9
82,697	+				+0.2
82,698	-				-0.6
82,698	-				-0.3
82,739	+				-0.8
82,739	+				+0.2
82,739	+				+1.3
82,739	+				-0.3
82,739	+				-0.1
82,739	+				+0.9
82,739	+				-0.3
82,739	+				+0.1
82,739	+				-0.6
82,740	-				+0.5
82,740	-				+0.1
82,740	-				+0.2
82,740	-				-0.6
82,740	-				+0.9
82,740	-				-0.6
82,740	-				-0.6
82,760	+				+0.7
82,833	-				+0.4
82,902	-				+0.8
83,009	+		Sama_0077	0.14	+0.4
83,009	+		Sama_0077	0.14	+1.5
83,010	-		Sama_0077	0.15	-0.6
83,010	-		Sama_0077	0.15	-0.4
83,031	-		Sama_0077	0.16	-0.1
83,031	-		Sama_0077	0.16	-0.2
83,093	-		Sama_0077	0.22	-0.5
83,189	+		Sama_0077	0.30	+0.9
83,189	+		Sama_0077	0.30	-1.1
83,189	+		Sama_0077	0.30	+0.5
83,189	+		Sama_0077	0.30	-0.7
83,190	-		Sama_0077	0.30	-0.7
83,190	-		Sama_0077	0.30	-0.3
83,190	-		Sama_0077	0.30	+1.8
83,190	-		Sama_0077	0.30	-2.2
83,225	+		Sama_0077	0.33	-0.1
83,225	+		Sama_0077	0.33	-1.4
83,225	+		Sama_0077	0.33	-0.7
83,225	+		Sama_0077	0.33	+0.5
83,225	+		Sama_0077	0.33	-0.4
83,225	+		Sama_0077	0.33	-0.2
83,225	+		Sama_0077	0.33	+1.1
83,225	+		Sama_0077	0.33	-0.6
83,225	+		Sama_0077	0.33	+0.0
83,225	+		Sama_0077	0.33	+0.3
83,226	-		Sama_0077	0.33	+0.8
83,226	-		Sama_0077	0.33	-1.6
83,226	-		Sama_0077	0.33	+2.2
83,226	-		Sama_0077	0.33	-2.1
83,226	-		Sama_0077	0.33	+1.1
83,226	-		Sama_0077	0.33	-1.1
83,226	-		Sama_0077	0.33	-1.9
83,226	-		Sama_0077	0.33	-1.4
83,226	-		Sama_0077	0.33	+0.8
83,226	-		Sama_0077	0.33	-0.5
83,226	-		Sama_0077	0.33	-0.4
83,226	-		Sama_0077	0.33	-1.7
83,227	+		Sama_0077	0.33	+0.0
83,227	+		Sama_0077	0.33	-0.3
83,227	+		Sama_0077	0.33	+0.2
83,227	+		Sama_0077	0.33	+0.2
83,227	+		Sama_0077	0.33	-0.4
83,227	+		Sama_0077	0.33	-0.5
83,227	+		Sama_0077	0.33	-0.1
83,227	+		Sama_0077	0.33	-1.1
83,227	+		Sama_0077	0.33	-2.3
83,227	+		Sama_0077	0.33	-0.3
83,227	+		Sama_0077	0.33	-0.7
83,227	+		Sama_0077	0.33	+0.7
83,227	+		Sama_0077	0.33	+0.2
83,227	+		Sama_0077	0.33	+0.4
83,228	-		Sama_0077	0.33	+0.5
83,228	-		Sama_0077	0.33	+0.8
83,228	-		Sama_0077	0.33	-0.1
83,228	-		Sama_0077	0.33	-0.3
83,228	-		Sama_0077	0.33	-0.1
83,228	-		Sama_0077	0.33	-0.6
83,228	-		Sama_0077	0.33	-0.4
83,228	-		Sama_0077	0.33	+1.3
83,228	-		Sama_0077	0.33	+0.3
83,228	-		Sama_0077	0.33	-0.2
83,228	-		Sama_0077	0.33	+0.7
83,228	-		Sama_0077	0.33	-0.6
83,228	-		Sama_0077	0.33	-1.5
83,228	-		Sama_0077	0.33	+1.0
83,249	+		Sama_0077	0.35	-0.5
83,249	+		Sama_0077	0.35	-1.5
83,249	+		Sama_0077	0.35	+0.0
83,250	-		Sama_0077	0.35	+0.2
83,250	-		Sama_0077	0.35	+1.0
83,277	+		Sama_0077	0.37	+1.2
83,277	+		Sama_0077	0.37	-0.5
83,277	+		Sama_0077	0.37	+0.6
83,277	+		Sama_0077	0.37	-0.1
83,277	+		Sama_0077	0.37	+0.7
83,277	+		Sama_0077	0.37	-1.6
83,277	+		Sama_0077	0.37	-0.6
83,277	+		Sama_0077	0.37	-0.0
83,277	+		Sama_0077	0.37	+0.4
83,277	+		Sama_0077	0.37	+1.7
83,278	-		Sama_0077	0.37	-0.6
83,278	-		Sama_0077	0.37	+2.4
83,278	-		Sama_0077	0.37	-2.0
83,278	-		Sama_0077	0.37	-0.7
83,278	-		Sama_0077	0.37	-0.6
83,278	-		Sama_0077	0.37	-0.1
83,278	-		Sama_0077	0.37	+0.2
83,278	-		Sama_0077	0.37	-0.9
83,278	-		Sama_0077	0.37	+1.8
83,278	-		Sama_0077	0.37	-1.6
83,278	-		Sama_0077	0.37	+0.8
83,442	+		Sama_0077	0.51	+0.4
83,443	-		Sama_0077	0.51	+0.1
83,443	-		Sama_0077	0.51	+0.7
83,443	-		Sama_0077	0.51	-1.1
83,443	-		Sama_0077	0.51	+0.4
83,443	-		Sama_0077	0.51	-0.3
83,443	-		Sama_0077	0.51	-0.5
83,443	-		Sama_0077	0.51	-0.9
83,443	-		Sama_0077	0.51	-0.3
83,490	+		Sama_0077	0.55	+0.2
83,490	+		Sama_0077	0.55	+0.4
83,490	+		Sama_0077	0.55	+1.0
83,490	+		Sama_0077	0.55	+1.9
83,490	+		Sama_0077	0.55	-0.9
83,491	-		Sama_0077	0.55	-0.5
83,491	-		Sama_0077	0.55	+0.0
83,547	-		Sama_0077	0.60	+2.0
83,579	+		Sama_0077	0.63	+0.8
83,579	+		Sama_0077	0.63	-1.4
83,579	+		Sama_0077	0.63	-1.0
83,580	-		Sama_0077	0.63	+1.1
83,580	-		Sama_0077	0.63	-0.2
83,580	-		Sama_0077	0.63	-2.3
83,580	-		Sama_0077	0.63	-0.0
83,580	-		Sama_0077	0.63	-1.6
83,585	+		Sama_0077	0.63	-0.3
83,585	+		Sama_0077	0.63	-0.3
83,585	+		Sama_0077	0.63	-0.3
83,586	-		Sama_0077	0.64	-0.4
83,586	-		Sama_0077	0.64	-0.6
83,586	-		Sama_0077	0.64	-0.9
83,586	-		Sama_0077	0.64	+0.3
83,589	+		Sama_0077	0.64	+0.9
83,590	-		Sama_0077	0.64	-0.5
83,638	-		Sama_0077	0.68	+0.2
83,638	-		Sama_0077	0.68	+0.1
83,638	-		Sama_0077	0.68	-0.1