Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3830 and Dshi_3831 overlap by 4 nucleotides Dshi_3831 and Dshi_3832 are separated by 11 nucleotides
Dshi_3830: Dshi_3830 - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (RefSeq), at 38,247 to 39,386
_3830
Dshi_3831: Dshi_3831 - sucrose-6F-phosphate phosphohydrolase (RefSeq), at 39,383 to 40,162
_3831
Dshi_3832: Dshi_3832 - glucosylglycerol-phosphate synthase (RefSeq), at 40,174 to 41,664
_3832
Position (kb) 39
40
41 Strain fitness (log2 ratio) -2
-1
0
1 at 38.434 kb on + strand, within Dshi_3830 at 38.442 kb on - strand, within Dshi_3830 at 38.456 kb on - strand, within Dshi_3830 at 38.486 kb on - strand, within Dshi_3830 at 38.644 kb on - strand, within Dshi_3830 at 38.767 kb on - strand, within Dshi_3830 at 38.789 kb on - strand, within Dshi_3830 at 38.883 kb on + strand, within Dshi_3830 at 39.137 kb on + strand, within Dshi_3830 at 39.221 kb on - strand, within Dshi_3830 at 39.221 kb on - strand, within Dshi_3830 at 39.231 kb on - strand, within Dshi_3830 at 39.277 kb on - strand at 39.277 kb on - strand at 39.399 kb on - strand at 39.406 kb on - strand at 39.444 kb on - strand at 39.454 kb on - strand at 39.595 kb on + strand, within Dshi_3831 at 39.703 kb on + strand, within Dshi_3831 at 39.727 kb on + strand, within Dshi_3831 at 39.816 kb on + strand, within Dshi_3831 at 39.887 kb on - strand, within Dshi_3831 at 40.039 kb on - strand, within Dshi_3831 at 40.157 kb on + strand at 40.169 kb on + strand at 40.401 kb on + strand, within Dshi_3832 at 40.468 kb on - strand, within Dshi_3832 at 40.478 kb on + strand, within Dshi_3832 at 40.481 kb on - strand, within Dshi_3832 at 40.481 kb on - strand, within Dshi_3832 at 40.493 kb on + strand, within Dshi_3832 at 40.501 kb on - strand, within Dshi_3832 at 40.571 kb on + strand, within Dshi_3832 at 40.579 kb on - strand, within Dshi_3832 at 40.660 kb on + strand, within Dshi_3832 at 40.710 kb on - strand, within Dshi_3832 at 40.730 kb on - strand, within Dshi_3832 at 40.752 kb on + strand, within Dshi_3832 at 40.758 kb on - strand, within Dshi_3832 at 40.855 kb on + strand, within Dshi_3832 at 40.954 kb on - strand, within Dshi_3832 at 41.005 kb on + strand, within Dshi_3832 at 41.005 kb on + strand, within Dshi_3832 at 41.013 kb on - strand, within Dshi_3832
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 38,434 + Dshi_3830 0.16 -0.1 38,442 - Dshi_3830 0.17 +1.1 38,456 - Dshi_3830 0.18 -2.4 38,486 - Dshi_3830 0.21 -1.0 38,644 - Dshi_3830 0.35 +0.2 38,767 - Dshi_3830 0.46 +0.9 38,789 - Dshi_3830 0.48 +0.1 38,883 + Dshi_3830 0.56 +0.6 39,137 + Dshi_3830 0.78 -0.2 39,221 - Dshi_3830 0.85 -0.1 39,221 - Dshi_3830 0.85 +0.0 39,231 - Dshi_3830 0.86 -0.2 39,277 - +0.0 39,277 - +1.0 39,399 - +0.2 39,406 - +0.3 39,444 - -0.2 39,454 - +1.0 39,595 + Dshi_3831 0.27 +1.4 39,703 + Dshi_3831 0.41 +0.4 39,727 + Dshi_3831 0.44 -0.2 39,816 + Dshi_3831 0.56 +0.2 39,887 - Dshi_3831 0.65 +0.5 40,039 - Dshi_3831 0.84 +0.4 40,157 + -1.0 40,169 + +0.5 40,401 + Dshi_3832 0.15 -0.0 40,468 - Dshi_3832 0.20 -0.0 40,478 + Dshi_3832 0.20 +1.7 40,481 - Dshi_3832 0.21 -0.1 40,481 - Dshi_3832 0.21 +0.3 40,493 + Dshi_3832 0.21 -0.2 40,501 - Dshi_3832 0.22 -1.4 40,571 + Dshi_3832 0.27 -0.1 40,579 - Dshi_3832 0.27 +0.1 40,660 + Dshi_3832 0.33 -0.2 40,710 - Dshi_3832 0.36 +0.3 40,730 - Dshi_3832 0.37 -0.1 40,752 + Dshi_3832 0.39 -0.2 40,758 - Dshi_3832 0.39 -0.2 40,855 + Dshi_3832 0.46 -0.2 40,954 - Dshi_3832 0.52 +0.1 41,005 + Dshi_3832 0.56 -1.7 41,005 + Dshi_3832 0.56 +0.3 41,013 - Dshi_3832 0.56 +0.3
Or see this region's nucleotide sequence