Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2603

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
2,767,012	-		Dshi_2602	0.52	+0.2
2,767,024	+		Dshi_2602	0.53	+0.7
2,767,025	+		Dshi_2602	0.53	-0.2
2,767,031	-		Dshi_2602	0.53	-0.2
2,767,031	-		Dshi_2602	0.53	-0.6
2,767,042	+		Dshi_2602	0.54	-0.1
2,767,050	-		Dshi_2602	0.55	-0.7
2,767,052	-		Dshi_2602	0.55	+1.2
2,767,055	-		Dshi_2602	0.55	+2.2
2,767,067	+		Dshi_2602	0.56	-0.3
2,767,067	+		Dshi_2602	0.56	+0.5
2,767,070	+		Dshi_2602	0.56	+0.5
2,767,070	-		Dshi_2602	0.56	-1.1
2,767,070	-		Dshi_2602	0.56	-0.0
2,767,070	-		Dshi_2602	0.56	-0.2
2,767,075	-		Dshi_2602	0.57	-0.1
2,767,075	-		Dshi_2602	0.57	-1.0
2,767,075	-		Dshi_2602	0.57	-0.6
2,767,075	-		Dshi_2602	0.57	+0.2
2,767,075	-		Dshi_2602	0.57	-0.1
2,767,084	+		Dshi_2602	0.58	-0.2
2,767,105	+		Dshi_2602	0.59	+0.2
2,767,113	-		Dshi_2602	0.60	-0.0
2,767,125	+		Dshi_2602	0.61	-0.7
2,767,133	-		Dshi_2602	0.62	+0.5
2,767,135	+		Dshi_2602	0.62	-1.6
2,767,135	+		Dshi_2602	0.62	+0.9
2,767,135	+		Dshi_2602	0.62	-0.2
2,767,138	-		Dshi_2602	0.62	+0.6
2,767,143	-		Dshi_2602	0.63	-0.9
2,767,143	-		Dshi_2602	0.63	-1.1
2,767,145	+		Dshi_2602	0.63	-0.5
2,767,145	+		Dshi_2602	0.63	+0.5
2,767,145	+		Dshi_2602	0.63	+0.7
2,767,145	+		Dshi_2602	0.63	+0.4
2,767,145	+		Dshi_2602	0.63	-0.4
2,767,145	+		Dshi_2602	0.63	-0.6
2,767,147	+		Dshi_2602	0.63	-1.6
2,767,152	+		Dshi_2602	0.63	-0.3
2,767,152	+		Dshi_2602	0.63	-0.0
2,767,153	-		Dshi_2602	0.63	-0.5
2,767,155	-		Dshi_2602	0.64	+0.1
2,767,155	-		Dshi_2602	0.64	+0.4
2,767,157	+		Dshi_2602	0.64	+0.1
2,767,157	+		Dshi_2602	0.64	+2.3
2,767,160	-				+1.5
2,767,165	-		Dshi_2602	0.64	+0.3
2,767,177	-		Dshi_2602	0.65	+0.4
2,767,186	+		Dshi_2602	0.66	+2.3
2,767,200	+		Dshi_2602	0.67	-0.5
2,767,217	+		Dshi_2602	0.69	-0.6
2,767,242	+		Dshi_2602	0.71	-0.5
2,767,250	-		Dshi_2602	0.71	-0.1
2,767,257	-		Dshi_2602	0.72	-1.3
2,767,265	-		Dshi_2602	0.73	-1.1
2,767,265	-		Dshi_2602	0.73	-0.5
2,767,267	+		Dshi_2602	0.73	+0.1
2,767,300	-		Dshi_2602	0.76	-0.0
2,767,325	+		Dshi_2602	0.78	+0.1
2,767,344	-		Dshi_2602	0.79	-1.6
2,767,364	+		Dshi_2602	0.81	-0.1
2,767,372	-		Dshi_2602	0.82	+0.1
2,767,374	+		Dshi_2602	0.82	-0.7
2,767,381	+		Dshi_2602	0.82	+0.4
2,767,381	+		Dshi_2602	0.82	+0.5
2,767,382	+		Dshi_2602	0.82	-0.6
2,767,382	+		Dshi_2602	0.82	-0.3
2,767,382	+		Dshi_2602	0.82	-0.8
2,767,389	-		Dshi_2602	0.83	-0.4
2,767,389	-		Dshi_2602	0.83	+0.0
2,767,389	-		Dshi_2602	0.83	+0.1
2,767,390	-		Dshi_2602	0.83	-0.3
2,767,390	-		Dshi_2602	0.83	-0.4
2,767,392	+		Dshi_2602	0.83	-0.0
2,767,392	+		Dshi_2602	0.83	+0.8
2,767,397	+		Dshi_2602	0.84	-0.6
2,767,399	-		Dshi_2602	0.84	+0.1
2,767,400	-		Dshi_2602	0.84	-0.3
2,767,400	-		Dshi_2602	0.84	-1.7
2,767,405	-		Dshi_2602	0.84	+1.0
2,767,410	+		Dshi_2602	0.85	-0.3
2,767,410	-		Dshi_2602	0.85	-0.2
2,767,416	-		Dshi_2602	0.85	-0.7
2,767,417	-		Dshi_2602	0.85	+1.1
2,767,417	-		Dshi_2602	0.85	-0.4
2,767,418	-		Dshi_2602	0.85	-0.5
2,767,418	-		Dshi_2602	0.85	-0.7
2,767,423	-		Dshi_2602	0.86	-0.3
2,767,444	+		Dshi_2602	0.87	-1.2
2,767,455	-		Dshi_2602	0.88	+1.0
2,767,457	+		Dshi_2602	0.89	-0.1
2,767,479	+				+0.1
2,767,479	+				-0.2
2,767,487	+				+0.0
2,767,487	+				-0.7
2,767,487	+				+0.3
2,767,494	-				-0.6
2,767,495	-				-1.0
2,767,495	-				-0.0
2,767,502	-				-0.2
2,767,520	+				-0.2
2,767,524	+				-0.1
2,767,524	+				+0.3
2,767,528	-				-0.3
2,767,528	-				-0.9
2,767,532	-				-0.5
2,767,532	-				-0.0
2,767,533	+				-0.6
2,767,534	+				-0.8
2,767,534	+				-1.0
2,767,534	+				-0.0
2,767,540	+				+0.3
2,767,542	-				-0.1
2,767,554	-				-0.6
2,767,561	+				-0.8
2,767,565	+				-1.8
2,767,568	-				-0.6
2,767,573	-				+0.3
2,767,573	-				+0.4
2,767,589	+				+1.7
2,767,597	-				-0.0
2,767,614	-				-0.8
2,767,622	-				+0.2
2,767,653	-				-0.3
2,767,687	-				-0.6
2,767,709	+				+0.2
2,767,718	-				+0.1
2,767,725	+				-0.3
2,767,726	-				+0.6
2,767,733	+				+0.3
2,767,740	-				-0.2
2,767,764	+				-0.2
2,767,764	+				+0.3
2,767,764	+				+0.8
2,767,764	+				-0.0
2,767,764	+				+0.1
2,767,764	+				-0.5
2,767,764	+				+0.4
2,767,772	-				-1.9
2,767,772	-				-0.1
2,767,799	+				+0.2
2,767,800	+				+0.1
2,767,809	+				-0.1
2,767,809	+				-0.0
2,767,809	+				-0.5
2,767,809	+				-0.3
2,767,809	+				+0.6
2,767,809	+				+0.3
2,767,810	+				-0.9
2,767,810	-				+0.4
2,767,810	-				-0.4
2,767,811	+				-0.2
2,767,812	-				-0.8
2,767,815	-				+0.4
2,767,817	-				-0.2
2,767,817	-				-1.0
2,767,817	-				-0.3
2,767,817	-				+0.2
2,767,817	-				-0.0
2,767,817	-				+0.4
2,767,817	-				+0.1
2,767,817	-				-0.5
2,767,817	-				-0.3
2,767,817	-				-0.4
2,767,840	-				-0.3
2,767,848	+				+0.5
2,767,887	+				-0.0
2,767,892	+				-0.4
2,767,893	-				+0.4
2,767,897	+				+0.3
2,767,897	+				-0.7
2,767,905	-				-0.1
2,767,905	-				+0.5
2,767,910	-				-0.6
2,767,922	-				-1.2
2,767,960	+				-0.4
2,767,965	+				+0.3
2,767,970	+				-0.3
2,767,973	-				+0.1
2,767,973	-				+2.6
2,767,973	-				-0.2
2,767,973	-				+0.7
2,767,973	-				+1.0
2,767,973	-				-0.5
2,767,973	-				+0.3
2,767,990	-				+0.0
2,768,001	-				-0.2
2,768,001	-				-0.6
2,768,005	+				-0.1
2,768,007	+				+0.0
2,768,007	+				-0.5
2,768,007	+				+0.2
2,768,009	-				-0.4
2,768,010	-				-0.0
2,768,012	+				+0.2
2,768,015	-				+0.3
2,768,076	+				+0.2
2,768,081	+				+1.1
2,768,081	+				-0.2
2,768,081	+				+0.9
2,768,105	-				-1.9
2,768,105	-				+0.3
2,768,144	+				-1.5
2,768,144	+				-0.3
2,768,152	-				+0.1
2,768,152	-				+0.2
2,768,234	+		Dshi_2603	0.13	-0.5
2,768,254	+		Dshi_2603	0.14	+0.0
2,768,276	+		Dshi_2603	0.15	+0.7
2,768,276	+		Dshi_2603	0.15	+1.3
2,768,284	-		Dshi_2603	0.16	+0.3
2,768,462	-		Dshi_2603	0.25	+0.1
2,768,497	-		Dshi_2603	0.27	+0.2
2,768,508	-		Dshi_2603	0.28	+0.3
2,768,534	+		Dshi_2603	0.29	+0.2
2,768,534	+		Dshi_2603	0.29	-0.7
2,768,603	-		Dshi_2603	0.33	-0.2
2,768,635	+		Dshi_2603	0.35	-0.7
2,768,847	+		Dshi_2603	0.46	-0.2
2,768,912	-		Dshi_2603	0.50	-1.4
2,768,934	+		Dshi_2603	0.51	-0.3
2,768,961	-		Dshi_2603	0.53	-0.3
2,768,961	-		Dshi_2603	0.53	+0.1
2,769,025	+		Dshi_2603	0.56	+0.1
2,769,072	+		Dshi_2603	0.59	-2.1
2,769,208	-		Dshi_2603	0.66	-0.0
2,769,439	-		Dshi_2603	0.79	-0.3
2,769,515	-		Dshi_2603	0.83	-0.1
2,769,524	-		Dshi_2603	0.83	-0.5
2,769,554	-		Dshi_2603	0.85	+0.1
2,769,555	+		Dshi_2603	0.85	+0.0
2,769,556	+		Dshi_2603	0.85	+0.4
2,769,561	+		Dshi_2603	0.85	+0.3
2,769,707	+				-0.0
2,769,715	-				+0.3
2,769,717	+				-0.1
2,769,745	-				-0.8
2,769,760	-				+0.2
2,769,804	-				-0.0
2,769,822	+				-0.9
2,769,944	-				-1.6
2,770,029	+		Dshi_2604	0.28	-0.2
2,770,350	+				-2.1
2,770,363	-		Dshi_2605	0.15	-0.1
2,770,445	-		Dshi_2605	0.51	+0.5
2,770,470	-		Dshi_2605	0.62	+0.2
2,770,507	+		Dshi_2605	0.79	-1.6
2,770,617	-				-0.5
2,770,645	-		Dshi_2606	0.10	+0.7
2,770,740	-		Dshi_2606	0.49	-1.1
2,770,796	-		Dshi_2606	0.72	-0.8