Experiment: m.b. pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_832 and HP15_833 are separated by 642 nucleotides HP15_833 and HP15_834 are separated by 121 nucleotides HP15_834 and HP15_835 overlap by 7 nucleotides
HP15_832: HP15_832 - aldo/keto reductase-like diketogulonate reductase, at 849,999 to 850,934
_832
HP15_833: HP15_833 - 2,5-diketo-D-gluconic acid reductase B, at 851,577 to 852,386
_833
HP15_834: HP15_834 - glutathione-dependent formaldehyde-activating, GFA, at 852,508 to 852,921
_834
HP15_835: HP15_835 - secreted protein containing glucose sorbosone dehydrogenase domain, at 852,915 to 854,036
_835
Position (kb) 851
852
853 Strain fitness (log2 ratio) -2
-1
0
1 at 850.601 kb on + strand, within HP15_832 at 850.619 kb on - strand, within HP15_832 at 850.626 kb on + strand, within HP15_832 at 850.663 kb on + strand, within HP15_832 at 850.663 kb on + strand, within HP15_832 at 850.814 kb on - strand, within HP15_832 at 850.847 kb on - strand at 851.087 kb on + strand at 851.092 kb on + strand at 851.092 kb on + strand at 851.097 kb on + strand at 851.100 kb on - strand at 851.115 kb on - strand at 851.157 kb on + strand at 851.324 kb on + strand at 851.332 kb on - strand at 851.358 kb on + strand at 851.359 kb on + strand at 851.398 kb on - strand at 851.429 kb on + strand at 851.459 kb on - strand at 851.493 kb on - strand at 851.507 kb on - strand at 851.510 kb on + strand at 851.689 kb on + strand, within HP15_833 at 851.779 kb on - strand, within HP15_833 at 851.855 kb on + strand, within HP15_833 at 851.863 kb on - strand, within HP15_833 at 851.895 kb on - strand, within HP15_833 at 851.915 kb on + strand, within HP15_833 at 852.033 kb on + strand, within HP15_833 at 852.051 kb on - strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.123 kb on - strand, within HP15_833 at 852.123 kb on - strand, within HP15_833 at 852.215 kb on + strand, within HP15_833 at 852.277 kb on - strand, within HP15_833 at 852.292 kb on + strand, within HP15_833 at 852.478 kb on + strand at 852.478 kb on + strand at 852.486 kb on - strand at 852.498 kb on + strand at 852.498 kb on + strand at 852.602 kb on - strand, within HP15_834 at 852.653 kb on - strand, within HP15_834 at 852.659 kb on - strand, within HP15_834 at 852.752 kb on + strand, within HP15_834 at 853.034 kb on - strand, within HP15_835 at 853.141 kb on + strand, within HP15_835 at 853.149 kb on - strand, within HP15_835 at 853.220 kb on + strand, within HP15_835 at 853.238 kb on - strand, within HP15_835 at 853.323 kb on - strand, within HP15_835 at 853.336 kb on - strand, within HP15_835
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6 remove 850,601 + HP15_832 0.64 -0.3 850,619 - HP15_832 0.66 -1.2 850,626 + HP15_832 0.67 -0.1 850,663 + HP15_832 0.71 +0.8 850,663 + HP15_832 0.71 +0.5 850,814 - HP15_832 0.87 +0.2 850,847 - -0.4 851,087 + -0.6 851,092 + +1.0 851,092 + +0.0 851,097 + -1.3 851,100 - +0.3 851,115 - +0.2 851,157 + -0.1 851,324 + -0.4 851,332 - +0.5 851,358 + -0.0 851,359 + -0.1 851,398 - +0.4 851,429 + -0.1 851,459 - +0.9 851,493 - +0.3 851,507 - -0.1 851,510 + +0.2 851,689 + HP15_833 0.14 -1.1 851,779 - HP15_833 0.25 -0.3 851,855 + HP15_833 0.34 -0.6 851,863 - HP15_833 0.35 -0.4 851,895 - HP15_833 0.39 +0.4 851,915 + HP15_833 0.42 +0.3 852,033 + HP15_833 0.56 -0.4 852,051 - HP15_833 0.59 -1.1 852,115 + HP15_833 0.66 -0.2 852,115 + HP15_833 0.66 +0.1 852,115 + HP15_833 0.66 -0.0 852,115 + HP15_833 0.66 +0.0 852,123 - HP15_833 0.67 -0.4 852,123 - HP15_833 0.67 +0.5 852,215 + HP15_833 0.79 -0.7 852,277 - HP15_833 0.86 -0.8 852,292 + HP15_833 0.88 -0.1 852,478 + -0.4 852,478 + +0.2 852,486 - -2.4 852,498 + +0.3 852,498 + -0.2 852,602 - HP15_834 0.23 -0.8 852,653 - HP15_834 0.35 -0.2 852,659 - HP15_834 0.36 +0.3 852,752 + HP15_834 0.59 +0.0 853,034 - HP15_835 0.11 +0.2 853,141 + HP15_835 0.20 -0.9 853,149 - HP15_835 0.21 -0.2 853,220 + HP15_835 0.27 +0.2 853,238 - HP15_835 0.29 -0.6 853,323 - HP15_835 0.36 +0.0 853,336 - HP15_835 0.38 -0.2
Or see this region's nucleotide sequence