Strain Fitness in Shewanella amazonensis SB2B around Sama_3432

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
4,060,824	+		Sama_3430	0.84	+0.3
4,060,839	+		Sama_3430	0.86	-0.7
4,060,839	+		Sama_3430	0.86	-2.9
4,060,840	-		Sama_3430	0.86	+0.3
4,060,876	+				+0.4
4,060,877	-				-0.6
4,060,941	-				-0.1
4,060,960	-				-2.3
4,060,991	+				-0.1
4,060,992	-				+0.0
4,061,011	+				-1.3
4,061,012	-				+2.8
4,061,074	+				+0.3
4,061,074	+				-0.2
4,061,074	+				+0.7
4,061,074	+				-0.2
4,061,075	-				-0.3
4,061,075	-				+1.9
4,061,075	-				+0.7
4,061,075	-				-1.8
4,061,084	+				-0.3
4,061,084	+				+0.1
4,061,106	+				+0.3
4,061,107	-				+1.3
4,061,186	+		Sama_3431	0.21	+2.1
4,061,186	+		Sama_3431	0.21	-0.7
4,061,186	+		Sama_3431	0.21	-1.3
4,061,186	+		Sama_3431	0.21	+0.5
4,061,186	+		Sama_3431	0.21	-0.3
4,061,186	+		Sama_3431	0.21	+1.1
4,061,186	+		Sama_3431	0.21	+1.2
4,061,186	+		Sama_3431	0.21	-1.0
4,061,186	+		Sama_3431	0.21	-0.7
4,061,187	-		Sama_3431	0.21	-0.7
4,061,187	-		Sama_3431	0.21	-0.4
4,061,187	-		Sama_3431	0.21	-0.1
4,061,187	-		Sama_3431	0.21	-1.1
4,061,187	-		Sama_3431	0.21	-0.1
4,061,187	-		Sama_3431	0.21	-2.1
4,061,187	-		Sama_3431	0.21	-0.7
4,061,373	+		Sama_3431	0.59	+1.5
4,061,374	-		Sama_3431	0.59	-0.8
4,061,448	+		Sama_3431	0.74	+0.1
4,061,448	+		Sama_3431	0.74	+0.3
4,061,448	+		Sama_3431	0.74	-0.2
4,061,449	-		Sama_3431	0.74	-1.4
4,061,449	-		Sama_3431	0.74	-0.1
4,061,449	-		Sama_3431	0.74	-1.3
4,061,563	+				-0.2
4,061,563	+				+0.3
4,061,564	-				+0.4
4,061,564	-				-0.9
4,061,564	-				-0.4
4,061,574	+				-0.3
4,061,574	+				+0.1
4,061,574	+				-0.8
4,061,574	+				-1.0
4,061,574	+				+2.9
4,061,574	+				-0.2
4,061,574	+				-0.6
4,061,574	+				-0.5
4,061,574	+				+0.7
4,061,574	+				+0.0
4,061,574	+				+0.1
4,061,574	+				+0.2
4,061,575	-				+0.5
4,061,575	-				+0.2
4,061,575	-				+1.0
4,061,575	-				-0.8
4,061,575	-				-0.7
4,061,575	-				+1.1
4,061,575	-				+0.4
4,061,575	-				+0.2
4,061,575	-				+0.2
4,061,575	-				-0.2
4,061,575	-				-0.3
4,061,575	-				+0.9
4,061,575	-				+0.7
4,061,576	+				-0.1
4,061,576	+				-0.3
4,061,576	+				-0.3
4,061,576	+				+4.3
4,061,576	+				-0.4
4,061,576	+				+0.0
4,061,576	+				-1.6
4,061,576	+				-0.1
4,061,576	+				+0.3
4,061,576	+				+0.6
4,061,577	-				-1.1
4,061,577	-				+0.1
4,061,577	-				-1.1
4,061,577	-				-0.0
4,061,577	-				+0.6
4,061,577	-				+0.0
4,061,577	-				+1.0
4,061,627	+				-0.8
4,061,627	+				-0.2
4,061,627	+				+0.2
4,061,627	+				+1.0
4,061,628	-				-1.8
4,061,628	-				-1.2
4,061,628	-				-0.6
4,061,628	-				+0.4
4,061,628	-				+0.3
4,061,628	-				-1.6
4,061,672	+				+1.4
4,061,672	+				-0.5
4,061,697	+				+3.1
4,061,697	+				+0.8
4,061,698	-				-0.8
4,061,698	-				-2.3
4,061,707	+				-1.3
4,061,707	+				-1.2
4,061,707	+				+3.3
4,061,707	+				-0.3
4,061,707	+				+0.0
4,061,707	+				-0.7
4,061,707	+				-1.5
4,061,707	+				-0.3
4,061,707	+				+0.1
4,061,707	+				+1.7
4,061,707	+				-0.6
4,061,707	+				-1.4
4,061,708	-				+1.1
4,061,708	-				-0.3
4,061,708	-				-1.2
4,061,708	-				-1.0
4,061,708	-				+1.1
4,061,708	-				+0.1
4,061,708	-				-0.5
4,061,708	-				-0.9
4,061,708	-				+1.0
4,061,708	-				+2.8
4,061,708	-				-0.1
4,061,715	+				-0.8
4,061,732	+				+1.1
4,061,732	+				+0.2
4,061,733	-				-2.0
4,061,733	-				+2.3
4,061,733	-				+0.1
4,061,743	-				+0.4
4,061,743	-				-0.1
4,061,743	-				-0.5
4,061,744	+				-1.2
4,061,745	-				-1.6
4,061,770	-				-0.6
4,061,770	-				+0.7
4,061,821	+				+0.5
4,061,821	+				+0.4
4,061,830	+				+0.6
4,061,831	-				+2.3
4,061,831	-				-1.0
4,061,963	+		Sama_3432	0.28	-2.2
4,061,963	+		Sama_3432	0.28	+1.1
4,061,963	+		Sama_3432	0.28	-0.7
4,061,963	+		Sama_3432	0.28	-0.2
4,061,963	+		Sama_3432	0.28	-0.2
4,061,964	-		Sama_3432	0.28	-0.7
4,061,975	+		Sama_3432	0.30	+0.3
4,061,976	-		Sama_3432	0.30	+0.2
4,061,999	+		Sama_3432	0.33	-0.7
4,061,999	+		Sama_3432	0.33	-1.1
4,062,000	-		Sama_3432	0.33	+1.2
4,062,023	+		Sama_3432	0.37	-0.2
4,062,063	+		Sama_3432	0.42	-0.6
4,062,063	+		Sama_3432	0.42	-0.5
4,062,063	+		Sama_3432	0.42	-0.7
4,062,064	-		Sama_3432	0.43	+0.2
4,062,064	-		Sama_3432	0.43	-1.1
4,062,166	+		Sama_3432	0.57	+0.9
4,062,166	+		Sama_3432	0.57	-1.1
4,062,166	+		Sama_3432	0.57	-0.3
4,062,167	-		Sama_3432	0.57	-2.1
4,062,167	-		Sama_3432	0.57	-1.3
4,062,167	-		Sama_3432	0.57	-0.1
4,062,187	+		Sama_3432	0.60	-0.9
4,062,187	+		Sama_3432	0.60	-1.2
4,062,188	-		Sama_3432	0.61	+0.3
4,062,227	+		Sama_3432	0.66	-1.1
4,062,228	-		Sama_3432	0.66	-0.9
4,062,242	+		Sama_3432	0.68	-0.4
4,062,243	-		Sama_3432	0.69	-0.5
4,062,296	+		Sama_3432	0.76	-0.8
4,062,296	+		Sama_3432	0.76	-0.1
4,062,297	-		Sama_3432	0.76	+2.3
4,062,297	-		Sama_3432	0.76	+1.2
4,062,360	-		Sama_3432	0.86	-0.5
4,062,360	-		Sama_3432	0.86	+0.2
4,062,419	-				+3.2
4,062,435	-				-0.1
4,062,441	+				-1.2
4,062,441	+				-1.1
4,062,441	+				+1.1
4,062,441	+				-0.6
4,062,442	-				+0.4
4,062,442	-				-1.5
4,062,442	-				-0.5
4,062,442	-				+0.5
4,062,442	-				-0.6
4,062,442	-				+0.1
4,062,443	+				-0.6
4,062,443	+				+1.3
4,062,443	+				+5.0
4,062,443	+				-0.3
4,062,443	+				-0.2
4,062,443	+				+3.1
4,062,443	+				-1.7
4,062,443	+				+0.7
4,062,443	+				-0.1
4,062,443	+				+2.4
4,062,443	+				-0.1
4,062,443	+				-0.8
4,062,443	+				+0.3
4,062,443	+				+0.1
4,062,443	+				+1.4
4,062,443	+				+0.2
4,062,443	+				-0.4
4,062,443	+				-0.9
4,062,443	+				+2.7
4,062,444	-				-0.5
4,062,444	-				-1.2
4,062,444	-				-0.1
4,062,444	-				+3.2
4,062,444	-				-0.3
4,062,444	-				-0.5
4,062,444	-				-0.7
4,062,444	-				+0.5
4,062,444	-				-0.2
4,062,444	-				-0.3
4,062,444	-				+2.7
4,062,444	-				-0.8
4,062,444	-				-0.4
4,062,444	-				-0.3
4,062,444	-				+1.4
4,062,444	-				-0.8
4,062,444	-				+0.5
4,062,444	-				+0.6
4,062,444	-				-1.2
4,062,444	-				+0.2
4,062,444	-				+1.4
4,062,444	-				-0.3
4,062,488	-				-1.7
4,062,488	-				-0.3
4,062,488	-				-0.1
4,062,488	-				-0.6
4,062,488	-				-0.4
4,062,513	+				-1.4
4,062,514	-				-1.1
4,062,514	-				-0.7
4,062,540	+				-1.7
4,062,714	+		Sama_3433	0.19	-0.6
4,062,715	-		Sama_3433	0.19	-0.7
4,062,715	-		Sama_3433	0.19	-0.2
4,062,718	+		Sama_3433	0.19	-0.6
4,062,719	-		Sama_3433	0.19	-1.3
4,062,719	-		Sama_3433	0.19	-0.4
4,062,719	-		Sama_3433	0.19	-0.8
4,062,719	-		Sama_3433	0.19	+0.6
4,062,719	-		Sama_3433	0.19	-1.1
4,062,719	-		Sama_3433	0.19	-1.1
4,062,771	+		Sama_3433	0.23	-0.9
4,062,773	-		Sama_3433	0.23	-0.4
4,062,815	+		Sama_3433	0.26	-0.0
4,062,815	+		Sama_3433	0.26	+0.7
4,062,815	+		Sama_3433	0.26	-0.5
4,062,815	+		Sama_3433	0.26	-2.4
4,062,816	-		Sama_3433	0.27	-0.8
4,062,816	-		Sama_3433	0.27	-0.1
4,062,816	-		Sama_3433	0.27	+0.2
4,062,868	+		Sama_3433	0.30	-1.1
4,062,869	-		Sama_3433	0.30	-0.4
4,062,875	+		Sama_3433	0.31	-0.3
4,062,875	+		Sama_3433	0.31	-1.1
4,062,875	+		Sama_3433	0.31	-0.8
4,062,876	-		Sama_3433	0.31	+0.3
4,062,876	-		Sama_3433	0.31	-1.3
4,062,876	-		Sama_3433	0.31	+0.5
4,062,876	-		Sama_3433	0.31	-0.5
4,062,876	-		Sama_3433	0.31	-1.8
4,062,884	+		Sama_3433	0.31	-1.2
4,062,884	+		Sama_3433	0.31	-0.6
4,062,885	-		Sama_3433	0.32	-2.1
4,063,021	+		Sama_3433	0.42	-1.2
4,063,021	+		Sama_3433	0.42	+0.1
4,063,021	+		Sama_3433	0.42	+0.0
4,063,021	+		Sama_3433	0.42	+0.3
4,063,021	+		Sama_3433	0.42	-0.0
4,063,022	-		Sama_3433	0.42	-1.5
4,063,022	-		Sama_3433	0.42	-0.2
4,063,270	+		Sama_3433	0.60	+0.8
4,063,271	-		Sama_3433	0.60	-1.2
4,063,271	-		Sama_3433	0.60	-0.1
4,063,271	-		Sama_3433	0.60	-2.0
4,063,278	+		Sama_3433	0.60	-2.7
4,063,285	+		Sama_3433	0.61	-0.2
4,063,285	+		Sama_3433	0.61	-0.5
4,063,286	-		Sama_3433	0.61	+0.2
4,063,286	-		Sama_3433	0.61	+0.7
4,063,407	+		Sama_3433	0.70	+1.1
4,063,408	-		Sama_3433	0.70	+0.4
4,063,408	-		Sama_3433	0.70	+0.5
4,063,408	-		Sama_3433	0.70	-0.5
4,063,408	-		Sama_3433	0.70	-1.6
4,063,408	-		Sama_3433	0.70	+0.5