Strain Fitness in Shewanella amazonensis SB2B around Sama_2909

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,457,802	-		Sama_2908	0.54	-0.4
3,457,802	-		Sama_2908	0.54	+2.4
3,457,808	-		Sama_2908	0.54	+1.1
3,457,808	-		Sama_2908	0.54	-0.2
3,457,829	-		Sama_2908	0.55	-0.3
3,457,835	-		Sama_2908	0.55	-0.1
3,457,835	-		Sama_2908	0.55	-0.0
3,457,875	+		Sama_2908	0.58	-1.0
3,457,949	+		Sama_2908	0.62	-1.0
3,457,950	-		Sama_2908	0.62	-0.2
3,457,950	-		Sama_2908	0.62	-1.5
3,457,962	+		Sama_2908	0.63	+0.5
3,457,963	-		Sama_2908	0.63	+0.2
3,457,991	+		Sama_2908	0.64	-0.3
3,457,991	+		Sama_2908	0.64	+0.1
3,457,991	+		Sama_2908	0.64	+0.5
3,457,991	+		Sama_2908	0.64	-0.3
3,457,991	+		Sama_2908	0.64	+1.9
3,457,992	-		Sama_2908	0.64	+0.4
3,457,992	-		Sama_2908	0.64	+0.4
3,458,000	-		Sama_2908	0.65	-2.0
3,458,114	-		Sama_2908	0.71	+0.3
3,458,233	+		Sama_2908	0.78	+0.5
3,458,250	+		Sama_2908	0.79	+0.4
3,458,251	-		Sama_2908	0.79	-0.2
3,458,251	-		Sama_2908	0.79	-0.1
3,458,261	+		Sama_2908	0.79	+0.1
3,458,262	-		Sama_2908	0.79	-1.8
3,458,294	+		Sama_2908	0.81	-0.2
3,458,295	-		Sama_2908	0.81	+0.2
3,458,310	+		Sama_2908	0.82	+0.2
3,458,310	+		Sama_2908	0.82	+0.4
3,458,349	-		Sama_2908	0.84	-0.5
3,458,349	-		Sama_2908	0.84	+2.5
3,458,349	-		Sama_2908	0.84	+0.9
3,458,386	+		Sama_2908	0.86	-0.2
3,458,386	+		Sama_2908	0.86	-3.2
3,458,386	+		Sama_2908	0.86	-1.2
3,458,387	-		Sama_2908	0.86	+0.1
3,458,387	-		Sama_2908	0.86	+0.9
3,458,387	-		Sama_2908	0.86	+0.2
3,458,465	-				+0.2
3,458,527	+				-2.0
3,458,538	+				+0.5
3,458,540	+				-0.5
3,458,549	-				-0.5
3,458,647	+				+1.0
3,458,648	-				-0.4
3,458,648	-				+0.8
3,458,648	-				-0.3
3,458,648	-				+0.5
3,458,669	+				-0.0
3,458,669	+				+0.3
3,458,669	+				+0.8
3,458,669	+				-0.2
3,458,669	+				-0.2
3,458,669	+				+0.6
3,458,669	+				+0.4
3,458,670	-				-0.0
3,458,670	-				-0.8
3,458,670	-				-0.4
3,458,670	-				-0.6
3,458,670	-				+0.6
3,458,670	-				-0.5
3,458,705	+				+1.7
3,458,705	+				-0.1
3,458,705	+				+0.4
3,458,705	+				+0.4
3,458,706	-				+0.1
3,458,717	+				-0.8
3,458,821	+				-0.1
3,458,821	+				+0.9
3,458,860	+		Sama_2909	0.11	+1.5
3,458,861	-		Sama_2909	0.11	-0.8
3,458,877	+		Sama_2909	0.12	-0.6
3,458,878	-		Sama_2909	0.13	-1.6
3,458,881	+		Sama_2909	0.13	-0.5
3,458,883	+		Sama_2909	0.13	+0.7
3,458,884	-		Sama_2909	0.13	-0.2
3,458,896	+		Sama_2909	0.14	+0.9
3,458,896	+		Sama_2909	0.14	-0.6
3,458,977	+		Sama_2909	0.22	+0.7
3,459,000	+		Sama_2909	0.24	-2.5
3,459,001	-		Sama_2909	0.24	-2.0
3,459,112	+		Sama_2909	0.34	+2.2
3,459,112	+		Sama_2909	0.34	+0.4
3,459,112	+		Sama_2909	0.34	-0.1
3,459,113	-		Sama_2909	0.34	-1.7
3,459,175	+		Sama_2909	0.40	-0.4
3,459,175	+		Sama_2909	0.40	+2.7
3,459,176	-		Sama_2909	0.40	-0.9
3,459,245	+		Sama_2909	0.46	-1.3
3,459,245	+		Sama_2909	0.46	-1.0
3,459,246	-		Sama_2909	0.46	+2.2
3,459,248	+		Sama_2909	0.46	+1.7
3,459,248	+		Sama_2909	0.46	-1.1
3,459,249	-		Sama_2909	0.47	+0.2
3,459,262	+		Sama_2909	0.48	-0.5
3,459,263	-		Sama_2909	0.48	+0.6
3,459,263	-		Sama_2909	0.48	+0.8
3,459,263	-		Sama_2909	0.48	-1.0
3,459,271	+		Sama_2909	0.49	-1.2
3,459,271	+		Sama_2909	0.49	+0.6
3,459,305	+		Sama_2909	0.52	-0.0
3,459,311	+		Sama_2909	0.52	+1.9
3,459,312	-		Sama_2909	0.52	-0.1
3,459,312	-		Sama_2909	0.52	+0.9
3,459,366	-		Sama_2909	0.57	+0.6
3,459,398	-		Sama_2909	0.60	-0.3
3,459,398	-		Sama_2909	0.60	-1.5
3,459,520	-		Sama_2909	0.71	+1.5
3,459,520	-		Sama_2909	0.71	+2.1
3,459,520	-		Sama_2909	0.71	-0.8
3,459,623	+		Sama_2909	0.81	+3.8
3,459,623	+		Sama_2909	0.81	+0.1
3,459,624	-		Sama_2909	0.81	+0.7
3,459,624	-		Sama_2909	0.81	+2.6
3,459,624	-		Sama_2909	0.81	-0.6
3,459,690	+		Sama_2909	0.87	-0.9
3,459,690	+		Sama_2909	0.87	-0.3
3,459,690	+		Sama_2909	0.87	-0.1
3,459,690	+		Sama_2909	0.87	+2.8
3,459,690	+		Sama_2909	0.87	+3.9
3,459,690	+		Sama_2909	0.87	+0.1
3,459,690	+		Sama_2909	0.87	+2.5
3,459,690	+		Sama_2909	0.87	+0.4
3,459,690	+		Sama_2909	0.87	+1.7
3,459,690	+		Sama_2909	0.87	-1.3
3,459,690	+		Sama_2909	0.87	-0.3
3,459,690	+		Sama_2909	0.87	+2.2
3,459,691	-		Sama_2909	0.87	-0.6
3,459,691	-		Sama_2909	0.87	+0.6
3,459,691	-		Sama_2909	0.87	+0.2
3,459,691	-		Sama_2909	0.87	+1.0
3,459,691	-		Sama_2909	0.87	-0.4
3,459,691	-		Sama_2909	0.87	-1.1
3,459,691	-		Sama_2909	0.87	+0.5
3,459,691	-		Sama_2909	0.87	+0.5
3,459,691	-		Sama_2909	0.87	+0.2
3,459,691	-		Sama_2909	0.87	-0.4
3,459,691	-		Sama_2909	0.87	-0.1
3,459,691	-		Sama_2909	0.87	+0.7
3,459,694	+		Sama_2909	0.87	-0.3
3,459,694	+		Sama_2909	0.87	-0.7
3,459,695	-		Sama_2909	0.87	-3.0
3,459,695	-		Sama_2909	0.87	-1.0
3,459,695	-		Sama_2909	0.87	-1.4
3,459,722	+		Sama_2909	0.90	+0.4
3,459,759	+				-0.2
3,459,759	+				-1.4
3,459,759	+				+0.9
3,459,759	+				-0.2
3,459,759	+				-1.3
3,459,759	+				-0.7
3,459,759	+				+0.1
3,459,760	-				-1.1
3,459,760	-				+2.5
3,459,760	-				-0.5
3,459,760	-				-0.6
3,459,760	-				-0.3
3,459,760	-				+0.3
3,459,838	+				-1.2
3,459,839	-				-1.4
3,459,887	+				+1.6
3,459,887	+				-0.6
3,459,887	+				-1.3
3,459,887	+				+1.1
3,459,887	+				+0.1
3,459,887	+				+1.0
3,459,888	-				+0.7
3,459,888	-				+0.0
3,459,888	-				-0.7
3,459,888	-				+1.3
3,459,888	-				+1.9
3,459,889	+				-0.6
3,459,889	+				+1.0
3,459,889	+				-0.7
3,459,889	+				-0.2
3,459,889	+				+0.8
3,459,889	+				-0.3
3,459,890	-				+0.6
3,460,032	-		Sama_2910	0.13	+0.4
3,460,032	-		Sama_2910	0.13	-0.4
3,460,032	-		Sama_2910	0.13	+0.8
3,460,118	-		Sama_2910	0.19	+0.7
3,460,170	-		Sama_2910	0.22	-1.6
3,460,275	-		Sama_2910	0.30	+0.6
3,460,275	-		Sama_2910	0.30	+0.5
3,460,310	+		Sama_2910	0.32	+3.6
3,460,310	+		Sama_2910	0.32	-0.1
3,460,310	+		Sama_2910	0.32	+2.0
3,460,368	+		Sama_2910	0.36	-1.0
3,460,368	+		Sama_2910	0.36	+0.2
3,460,368	+		Sama_2910	0.36	+2.5
3,460,368	+		Sama_2910	0.36	+0.6
3,460,399	+		Sama_2910	0.38	+0.0
3,460,399	+		Sama_2910	0.38	+0.3
3,460,400	-		Sama_2910	0.38	+0.1
3,460,400	-		Sama_2910	0.38	-1.2
3,460,406	+		Sama_2910	0.38	-0.7
3,460,406	+		Sama_2910	0.38	-0.4
3,460,406	+		Sama_2910	0.38	+1.6
3,460,407	-		Sama_2910	0.38	-0.7
3,460,407	-		Sama_2910	0.38	+1.6
3,460,407	-		Sama_2910	0.38	+0.2
3,460,407	-		Sama_2910	0.38	+0.3
3,460,407	-		Sama_2910	0.38	+0.4
3,460,523	+		Sama_2910	0.46	-1.5
3,460,524	-		Sama_2910	0.46	+0.5
3,460,684	+		Sama_2910	0.57	-1.3
3,460,684	+		Sama_2910	0.57	-0.3
3,460,684	+		Sama_2910	0.57	-1.2
3,460,684	+		Sama_2910	0.57	+0.2
3,460,684	+		Sama_2910	0.57	+0.1
3,460,684	+		Sama_2910	0.57	-0.5
3,460,685	-		Sama_2910	0.57	+0.1
3,460,685	-		Sama_2910	0.57	-0.1
3,460,688	+		Sama_2910	0.57	-0.5
3,460,688	+		Sama_2910	0.57	+0.8
3,460,689	-		Sama_2910	0.57	+4.3
3,460,689	-		Sama_2910	0.57	-0.7
3,460,689	-		Sama_2910	0.57	-2.0
3,460,689	-		Sama_2910	0.57	-0.8
3,460,689	-		Sama_2910	0.57	-1.2
3,460,768	+		Sama_2910	0.63	-1.2
3,460,768	+		Sama_2910	0.63	-0.1
3,460,769	-		Sama_2910	0.63	+1.3
3,460,769	-		Sama_2910	0.63	-0.3
3,460,796	+		Sama_2910	0.65	-0.4
3,460,797	-		Sama_2910	0.65	-0.8