Strain Fitness in Shewanella amazonensis SB2B around Sama_2767

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,306,922	+		Sama_2765	0.25	+0.1
3,307,101	+		Sama_2765	0.45	-0.9
3,307,101	+		Sama_2765	0.45	-0.9
3,307,101	+		Sama_2765	0.45	+1.1
3,307,263	-		Sama_2765	0.62	-0.3
3,307,312	-		Sama_2765	0.68	-0.1
3,307,480	+		Sama_2765	0.86	+1.0
3,307,515	+				-0.1
3,307,516	-				-0.9
3,307,516	-				+0.9
3,307,560	-				-0.6
3,307,605	-				-1.5
3,307,774	+		Sama_2766	0.55	-0.4
3,307,775	-		Sama_2766	0.55	-0.1
3,307,775	-		Sama_2766	0.55	+0.7
3,307,775	-		Sama_2766	0.55	-0.3
3,307,794	+		Sama_2766	0.63	+0.6
3,307,794	+		Sama_2766	0.63	+0.3
3,307,794	+		Sama_2766	0.63	-0.5
3,307,795	-		Sama_2766	0.63	+1.6
3,307,795	-		Sama_2766	0.63	-1.0
3,307,795	-		Sama_2766	0.63	-0.2
3,307,840	-		Sama_2766	0.81	-1.0
3,307,864	+				-0.5
3,307,864	+				+0.3
3,307,864	+				+1.1
3,307,864	+				-0.2
3,307,864	+				+0.6
3,307,864	+				+0.2
3,307,865	-				+1.6
3,307,865	-				-0.9
3,307,865	-				-1.5
3,307,907	+				-0.1
3,307,907	+				+0.3
3,307,908	-				-1.3
3,307,912	+				-1.1
3,308,031	+		Sama_2767	0.28	+0.0
3,308,031	+		Sama_2767	0.28	+0.5
3,308,031	+		Sama_2767	0.28	+1.1
3,308,031	+		Sama_2767	0.28	+0.3
3,308,031	+		Sama_2767	0.28	+0.7
3,308,032	-		Sama_2767	0.28	-1.6
3,308,032	-		Sama_2767	0.28	-0.1
3,308,032	-		Sama_2767	0.28	-0.4
3,308,032	-		Sama_2767	0.28	+0.0
3,308,032	-		Sama_2767	0.28	+1.5
3,308,032	-		Sama_2767	0.28	-0.1
3,308,032	-		Sama_2767	0.28	-1.1
3,308,032	-		Sama_2767	0.28	-0.3
3,308,032	-		Sama_2767	0.28	-0.9
3,308,032	-		Sama_2767	0.28	-0.3
3,308,032	-		Sama_2767	0.28	-0.5
3,308,063	+		Sama_2767	0.35	-0.3
3,308,064	-		Sama_2767	0.36	-0.7
3,308,064	-		Sama_2767	0.36	+0.1
3,308,098	+		Sama_2767	0.44	-0.2
3,308,278	+		Sama_2767	0.86	+0.1
3,308,278	+		Sama_2767	0.86	-2.6
3,308,278	+		Sama_2767	0.86	-0.6
3,308,278	+		Sama_2767	0.86	-0.1
3,308,278	+		Sama_2767	0.86	+1.4
3,308,278	+		Sama_2767	0.86	+0.7
3,308,278	+		Sama_2767	0.86	-1.3
3,308,279	-		Sama_2767	0.87	+0.7
3,308,279	-		Sama_2767	0.87	+3.6
3,308,322	+				-0.6
3,308,356	+				-0.9
3,308,356	+				+0.7
3,308,414	+				-1.0
3,308,442	+				+1.8
3,308,443	-				-0.1
3,308,469	+				+1.2
3,308,470	-				-1.8
3,308,470	-				-1.4
3,308,470	-				+0.8
3,308,470	-				+0.7
3,308,489	+				+1.5
3,308,489	+				-1.1
3,308,490	-				-0.5
3,308,562	+				-1.5
3,308,562	+				-2.2
3,308,562	+				+0.7
3,308,562	+				-0.5
3,308,563	-				-0.7
3,308,563	-				-0.5
3,308,563	-				+0.3
3,308,565	-				+0.8
3,308,565	-				+0.4
3,308,565	-				-0.1
3,308,575	-				+1.8
3,308,679	+		Sama_2768	0.13	-0.8
3,308,679	+		Sama_2768	0.13	-1.3
3,308,679	+		Sama_2768	0.13	+0.3
3,308,680	-		Sama_2768	0.13	-0.6
3,308,791	+		Sama_2768	0.22	-0.8
3,308,791	+		Sama_2768	0.22	-0.1
3,308,791	+		Sama_2768	0.22	-0.1
3,308,792	-		Sama_2768	0.22	-1.2
3,308,792	-		Sama_2768	0.22	-0.3
3,308,792	-		Sama_2768	0.22	+1.0
3,308,794	+		Sama_2768	0.22	-1.1
3,308,795	-		Sama_2768	0.22	-0.4
3,308,795	-		Sama_2768	0.22	-0.4
3,308,795	-		Sama_2768	0.22	+0.3
3,308,795	-		Sama_2768	0.22	+0.2
3,308,795	-		Sama_2768	0.22	-0.2
3,308,795	-		Sama_2768	0.22	+0.9
3,308,804	+		Sama_2768	0.23	+0.8
3,308,805	-		Sama_2768	0.23	-0.6
3,308,805	-		Sama_2768	0.23	-0.8
3,308,805	-		Sama_2768	0.23	-0.3
3,308,805	-		Sama_2768	0.23	-0.1
3,308,818	+		Sama_2768	0.24	+0.4
3,308,818	+		Sama_2768	0.24	-0.3
3,308,819	-		Sama_2768	0.24	-0.3
3,308,867	+		Sama_2768	0.28	-2.3
3,308,867	+		Sama_2768	0.28	-0.7
3,308,867	+		Sama_2768	0.28	-0.3
3,308,868	-		Sama_2768	0.28	+0.9
3,308,868	-		Sama_2768	0.28	+0.1
3,308,868	-		Sama_2768	0.28	+0.6
3,308,868	-		Sama_2768	0.28	+0.4
3,308,887	-		Sama_2768	0.29	+0.5
3,308,887	-		Sama_2768	0.29	+0.8
3,308,936	-		Sama_2768	0.33	+0.3
3,308,936	-		Sama_2768	0.33	-0.1
3,309,001	-		Sama_2768	0.38	+0.7
3,309,052	+		Sama_2768	0.42	+2.1
3,309,053	-		Sama_2768	0.42	+0.7
3,309,096	+		Sama_2768	0.45	-0.5
3,309,097	-		Sama_2768	0.45	+0.9
3,309,097	-		Sama_2768	0.45	-0.8
3,309,097	-		Sama_2768	0.45	+2.4
3,309,116	+		Sama_2768	0.47	+1.2
3,309,117	-		Sama_2768	0.47	-0.3
3,309,117	-		Sama_2768	0.47	-0.5
3,309,117	-		Sama_2768	0.47	-1.4
3,309,117	-		Sama_2768	0.47	-0.7
3,309,117	-		Sama_2768	0.47	-0.1
3,309,117	-		Sama_2768	0.47	+1.3
3,309,126	+		Sama_2768	0.48	-0.5
3,309,126	+		Sama_2768	0.48	-0.2
3,309,126	+		Sama_2768	0.48	+0.2
3,309,126	+		Sama_2768	0.48	-1.6
3,309,127	-		Sama_2768	0.48	+0.2
3,309,127	-		Sama_2768	0.48	+1.1
3,309,127	-		Sama_2768	0.48	+0.5
3,309,136	-		Sama_2768	0.48	-0.1
3,309,153	+		Sama_2768	0.50	+0.4
3,309,153	+		Sama_2768	0.50	-1.3
3,309,153	+		Sama_2768	0.50	-1.8
3,309,153	+		Sama_2768	0.50	+0.2
3,309,153	+		Sama_2768	0.50	+0.2
3,309,154	-		Sama_2768	0.50	+0.1
3,309,154	-		Sama_2768	0.50	-1.0
3,309,154	-		Sama_2768	0.50	-0.3
3,309,154	-		Sama_2768	0.50	+0.0
3,309,154	-		Sama_2768	0.50	+1.1
3,309,165	-		Sama_2768	0.51	-0.5
3,309,165	-		Sama_2768	0.51	+0.3
3,309,165	-		Sama_2768	0.51	+0.8
3,309,196	+		Sama_2768	0.53	-2.4
3,309,196	+		Sama_2768	0.53	-0.5
3,309,197	-		Sama_2768	0.53	-3.5
3,309,197	-		Sama_2768	0.53	+0.8
3,309,197	-		Sama_2768	0.53	-0.9
3,309,197	-		Sama_2768	0.53	+0.3
3,309,237	+		Sama_2768	0.56	-2.6
3,309,238	-		Sama_2768	0.56	-0.1
3,309,238	-		Sama_2768	0.56	-1.6
3,309,239	+		Sama_2768	0.56	-1.1
3,309,239	+		Sama_2768	0.56	+1.2
3,309,239	+		Sama_2768	0.56	-2.4
3,309,239	+		Sama_2768	0.56	-0.2
3,309,239	+		Sama_2768	0.56	-0.1
3,309,239	+		Sama_2768	0.56	-1.0
3,309,239	+		Sama_2768	0.56	+0.8
3,309,239	+		Sama_2768	0.56	-0.5
3,309,239	+		Sama_2768	0.56	-0.2
3,309,239	+		Sama_2768	0.56	-1.8
3,309,239	+		Sama_2768	0.56	+0.9
3,309,240	-		Sama_2768	0.57	-0.1
3,309,240	-		Sama_2768	0.57	+0.6
3,309,240	-		Sama_2768	0.57	+1.1
3,309,240	-		Sama_2768	0.57	-0.3
3,309,240	-		Sama_2768	0.57	-4.0
3,309,240	-		Sama_2768	0.57	-1.2
3,309,240	-		Sama_2768	0.57	+0.5
3,309,240	-		Sama_2768	0.57	-1.2
3,309,240	-		Sama_2768	0.57	+0.3
3,309,240	-		Sama_2768	0.57	-1.3
3,309,240	-		Sama_2768	0.57	+0.8
3,309,240	-		Sama_2768	0.57	-0.3
3,309,282	+		Sama_2768	0.60	-2.6
3,309,331	+		Sama_2768	0.64	-0.1
3,309,331	+		Sama_2768	0.64	+2.2