Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31940

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
3,347,971	-		PGA1_c31930	0.32	+2.1
3,348,075	-		PGA1_c31930	0.40	-0.5
3,348,085	+		PGA1_c31930	0.40	-2.2
3,348,124	+		PGA1_c31930	0.43	+0.9
3,348,143	+		PGA1_c31930	0.45	+1.3
3,348,145	+		PGA1_c31930	0.45	-0.6
3,348,153	-		PGA1_c31930	0.45	+0.2
3,348,156	+				+0.4
3,348,230	-		PGA1_c31930	0.51	-1.5
3,348,251	-		PGA1_c31930	0.52	+0.5
3,348,265	+		PGA1_c31930	0.53	-0.4
3,348,267	+		PGA1_c31930	0.54	+0.5
3,348,275	-		PGA1_c31930	0.54	-1.4
3,348,332	+		PGA1_c31930	0.58	+2.1
3,348,335	+		PGA1_c31930	0.59	+2.0
3,348,338	-		PGA1_c31930	0.59	-1.2
3,348,340	+		PGA1_c31930	0.59	+1.6
3,348,390	+		PGA1_c31930	0.63	+1.9
3,348,390	+		PGA1_c31930	0.63	-1.6
3,348,390	+		PGA1_c31930	0.63	+0.7
3,348,398	-		PGA1_c31930	0.63	-0.3
3,348,398	-		PGA1_c31930	0.63	-1.3
3,348,398	-		PGA1_c31930	0.63	+2.1
3,348,403	-		PGA1_c31930	0.64	+1.9
3,348,463	-		PGA1_c31930	0.68	-1.5
3,348,463	-		PGA1_c31930	0.68	+1.7
3,348,471	-		PGA1_c31930	0.69	+0.9
3,348,519	+		PGA1_c31930	0.72	+4.6
3,348,557	-		PGA1_c31930	0.75	+0.6
3,348,580	-		PGA1_c31930	0.77	-0.1
3,348,605	-		PGA1_c31930	0.78	+1.9
3,348,606	-		PGA1_c31930	0.78	+1.2
3,348,606	-		PGA1_c31930	0.78	+0.2
3,348,608	+		PGA1_c31930	0.79	+2.4
3,348,639	-		PGA1_c31930	0.81	+0.8
3,348,644	-		PGA1_c31930	0.81	+0.5
3,348,644	-		PGA1_c31930	0.81	+1.8
3,348,682	+		PGA1_c31930	0.84	+0.9
3,348,682	+		PGA1_c31930	0.84	+3.1
3,348,682	+		PGA1_c31930	0.84	+0.5
3,348,682	+		PGA1_c31930	0.84	+1.1
3,348,682	+		PGA1_c31930	0.84	-0.1
3,348,682	+		PGA1_c31930	0.84	+1.3
3,348,690	-		PGA1_c31930	0.85	+1.3
3,348,690	-		PGA1_c31930	0.85	-1.8
3,348,690	-		PGA1_c31930	0.85	-1.0
3,348,692	+		PGA1_c31930	0.85	+2.2
3,348,723	-		PGA1_c31930	0.87	-3.2
3,348,731	+		PGA1_c31930	0.88	-1.1
3,348,732	-		PGA1_c31930	0.88	-0.4
3,348,741	+		PGA1_c31930	0.88	+1.7
3,348,749	-		PGA1_c31930	0.89	-0.4
3,348,765	-				+1.1
3,348,800	+				+1.8
3,348,808	+				+1.0
3,348,808	-				-1.1
3,348,869	-				+0.9
3,348,874	-				+0.8
3,348,874	-				+0.7
3,348,877	+				-1.9
3,348,880	-				-1.2
3,348,901	-				+0.3
3,348,910	+				+0.3
3,348,912	+				+2.8
3,348,931	+				+1.1
3,348,931	+				-1.2
3,348,939	-				-1.4
3,348,939	-				+1.1
3,348,939	-				-0.2
3,348,977	-				+1.5
3,349,001	+		PGA1_c31940	0.11	+0.9
3,349,078	-		PGA1_c31940	0.20	-0.6
3,349,117	+		PGA1_c31940	0.24	-2.0
3,349,125	-		PGA1_c31940	0.25	+1.4
3,349,125	-		PGA1_c31940	0.25	-0.4
3,349,135	-		PGA1_c31940	0.26	+0.7
3,349,164	-		PGA1_c31940	0.29	-0.2
3,349,177	+		PGA1_c31940	0.30	+1.5
3,349,202	+		PGA1_c31940	0.33	+1.4
3,349,202	+		PGA1_c31940	0.33	-0.0
3,349,202	+		PGA1_c31940	0.33	-1.1
3,349,202	+		PGA1_c31940	0.33	+2.6
3,349,202	+		PGA1_c31940	0.33	+0.9
3,349,202	+		PGA1_c31940	0.33	-0.6
3,349,210	-		PGA1_c31940	0.34	-0.1
3,349,360	+		PGA1_c31940	0.50	+1.9
3,349,368	-		PGA1_c31940	0.51	+2.0
3,349,405	+		PGA1_c31940	0.55	+1.0
3,349,405	+		PGA1_c31940	0.55	+1.6
3,349,428	-		PGA1_c31940	0.58	+2.2
3,349,444	+		PGA1_c31940	0.59	+1.4
3,349,452	-		PGA1_c31940	0.60	-2.3
3,349,515	+		PGA1_c31940	0.67	-1.5
3,349,525	-		PGA1_c31940	0.68	+0.4
3,349,583	-		PGA1_c31940	0.74	-2.9
3,349,585	+		PGA1_c31940	0.75	-1.1
3,349,633	-		PGA1_c31940	0.80	+0.4
3,349,653	-		PGA1_c31940	0.82	-1.8
3,349,668	+		PGA1_c31940	0.84	+1.5
3,349,698	-		PGA1_c31940	0.87	+1.7
3,349,732	+				-1.8
3,349,739	-				+1.4
3,349,740	-				+1.8
3,349,755	-				-0.1
3,349,755	-				-0.5
3,349,786	-				-0.2
3,349,838	+				+0.5
3,349,846	-				-2.6
3,349,846	-				-1.6
3,349,846	-				-1.2
3,349,846	-				-1.8
3,349,856	-				+2.5
3,349,877	-				-1.9
3,349,896	+		PGA1_c31950	0.11	+2.3
3,349,896	+		PGA1_c31950	0.11	-0.7
3,349,911	+		PGA1_c31950	0.13	-2.6
3,349,929	-		PGA1_c31950	0.15	+2.2
3,349,939	-		PGA1_c31950	0.16	-1.8
3,350,007	-		PGA1_c31950	0.23	-0.6
3,350,041	-		PGA1_c31950	0.27	-0.1
3,350,054	-		PGA1_c31950	0.28	-1.4
3,350,061	-		PGA1_c31950	0.29	-1.8
3,350,062	+		PGA1_c31950	0.29	+0.2
3,350,067	+		PGA1_c31950	0.30	+0.5
3,350,103	+		PGA1_c31950	0.33	+0.5
3,350,116	-		PGA1_c31950	0.35	+1.9
3,350,117	+		PGA1_c31950	0.35	+0.0
3,350,197	-		PGA1_c31950	0.44	-2.3
3,350,198	-		PGA1_c31950	0.44	-3.2
3,350,220	+		PGA1_c31950	0.46	-3.5
3,350,227	+		PGA1_c31950	0.47	+1.9
3,350,228	-		PGA1_c31950	0.47	-1.1
3,350,235	-		PGA1_c31950	0.48	-1.1
3,350,235	-		PGA1_c31950	0.48	-0.6
3,350,235	-		PGA1_c31950	0.48	+0.5
3,350,283	+		PGA1_c31950	0.53	+1.7
3,350,299	+		PGA1_c31950	0.55	+0.5
3,350,325	+		PGA1_c31950	0.57	+1.6
3,350,325	+		PGA1_c31950	0.57	-1.5
3,350,325	+		PGA1_c31950	0.57	+3.0
3,350,325	+		PGA1_c31950	0.57	-3.2
3,350,325	+		PGA1_c31950	0.57	+1.8
3,350,325	+		PGA1_c31950	0.57	+2.1
3,350,325	+		PGA1_c31950	0.57	+1.7
3,350,325	+		PGA1_c31950	0.57	-0.1
3,350,325	+		PGA1_c31950	0.57	+1.8
3,350,325	+		PGA1_c31950	0.57	-1.3
3,350,325	+		PGA1_c31950	0.57	+3.0
3,350,325	+		PGA1_c31950	0.57	+2.7
3,350,325	+		PGA1_c31950	0.57	+2.8
3,350,325	+		PGA1_c31950	0.57	-1.2
3,350,325	+		PGA1_c31950	0.57	-0.9
3,350,325	+		PGA1_c31950	0.57	-1.1
3,350,325	+		PGA1_c31950	0.57	+0.4
3,350,325	+		PGA1_c31950	0.57	+2.1
3,350,333	-		PGA1_c31950	0.58	-2.0
3,350,333	-		PGA1_c31950	0.58	+0.4
3,350,333	-		PGA1_c31950	0.58	+1.3
3,350,333	-		PGA1_c31950	0.58	+2.8
3,350,333	-		PGA1_c31950	0.58	+0.5
3,350,333	-		PGA1_c31950	0.58	+3.3
3,350,333	-		PGA1_c31950	0.58	+2.4
3,350,333	-		PGA1_c31950	0.58	+0.2
3,350,333	-		PGA1_c31950	0.58	-2.1
3,350,333	-		PGA1_c31950	0.58	-0.6
3,350,333	-		PGA1_c31950	0.58	-0.9
3,350,333	-		PGA1_c31950	0.58	+1.7
3,350,335	-		PGA1_c31950	0.58	-1.5
3,350,337	+		PGA1_c31950	0.59	+2.7
3,350,392	-		PGA1_c31950	0.65	+0.1
3,350,493	-		PGA1_c31950	0.75	-0.9
3,350,497	+		PGA1_c31950	0.76	+1.4
3,350,505	-		PGA1_c31950	0.77	-0.4
3,350,641	-				-0.2
3,350,641	-				+0.6
3,350,655	+				-2.2
3,350,663	-				+0.4
3,350,711	+				+2.4
3,350,711	+				+1.1
3,350,726	+				+3.5
3,350,729	-				+0.2
3,350,729	-				+0.4
3,350,732	+				-2.5
3,350,738	+				+1.9
3,350,740	-				-0.1
3,350,744	+				-1.2
3,350,744	+				-0.1
3,350,752	-				-1.8
3,350,752	-				+1.9
3,350,752	-				-1.5
3,350,752	-				+0.7
3,350,805	+				-1.1