Strain Fitness in Shewanella amazonensis SB2B around Sama_2944

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,497,472	-				+1.5
3,497,530	-				+0.8
3,497,530	-				-0.7
3,497,530	-				+1.8
3,497,530	-				-0.5
3,497,530	-				-0.4
3,498,115	+				-0.6
3,498,115	+				+1.3
3,498,115	+				-0.7
3,498,139	+				+1.1
3,498,165	+				-0.5
3,498,166	-				-0.2
3,498,166	-				-0.4
3,498,222	+		Sama_2943	0.17	-1.6
3,498,223	-		Sama_2943	0.17	-0.9
3,498,225	+		Sama_2943	0.18	+0.1
3,498,225	+		Sama_2943	0.18	+0.6
3,498,225	+		Sama_2943	0.18	+0.2
3,498,225	+		Sama_2943	0.18	+0.6
3,498,225	+		Sama_2943	0.18	-2.6
3,498,225	+		Sama_2943	0.18	+0.4
3,498,225	+		Sama_2943	0.18	+0.8
3,498,225	+		Sama_2943	0.18	-1.6
3,498,226	-		Sama_2943	0.18	-1.5
3,498,226	-		Sama_2943	0.18	-0.9
3,498,226	-		Sama_2943	0.18	+1.6
3,498,226	-		Sama_2943	0.18	-0.8
3,498,226	-		Sama_2943	0.18	+0.1
3,498,226	-		Sama_2943	0.18	-1.7
3,498,226	-		Sama_2943	0.18	+0.9
3,498,291	+		Sama_2943	0.45	+1.7
3,498,292	-		Sama_2943	0.46	-0.5
3,498,292	-		Sama_2943	0.46	+1.8
3,498,292	-		Sama_2943	0.46	-0.6
3,498,364	+		Sama_2943	0.76	+0.3
3,498,452	+				-1.1
3,498,452	+				-0.3
3,498,453	-				-1.7
3,498,453	-				-2.4
3,498,453	-				-0.0
3,498,453	-				+0.7
3,498,453	-				-0.3
3,498,453	-				-2.0
3,498,454	+				-1.4
3,498,455	-				-0.3
3,498,455	-				-0.8
3,498,455	-				+1.3
3,498,455	-				+0.7
3,498,455	-				-0.5
3,498,459	+				-0.9
3,498,460	-				-1.2
3,498,460	-				-0.9
3,498,472	+				+0.5
3,498,473	-				-0.5
3,498,498	+				+1.9
3,498,499	-				-0.0
3,498,499	-				+0.4
3,498,556	-		Sama_2944	0.21	+3.0
3,498,556	-		Sama_2944	0.21	+1.3
3,498,624	+		Sama_2944	0.37	+0.9
3,498,625	-		Sama_2944	0.37	+0.9
3,498,644	+		Sama_2944	0.41	+0.4
3,498,644	+		Sama_2944	0.41	+1.1
3,498,644	+		Sama_2944	0.41	+1.4
3,498,645	-		Sama_2944	0.42	+0.1
3,498,645	-		Sama_2944	0.42	+2.0
3,498,645	-		Sama_2944	0.42	+0.1
3,498,647	+		Sama_2944	0.42	+1.5
3,498,647	+		Sama_2944	0.42	+0.3
3,498,647	+		Sama_2944	0.42	+0.3
3,498,647	+		Sama_2944	0.42	-0.1
3,498,647	+		Sama_2944	0.42	-0.9
3,498,647	+		Sama_2944	0.42	-0.3
3,498,648	-		Sama_2944	0.42	+1.6
3,498,648	-		Sama_2944	0.42	+0.1
3,498,680	+		Sama_2944	0.50	-0.8
3,498,680	+		Sama_2944	0.50	-0.1
3,498,680	+		Sama_2944	0.50	+1.1
3,498,681	-		Sama_2944	0.50	-0.0
3,498,681	-		Sama_2944	0.50	-0.5
3,498,681	-		Sama_2944	0.50	+0.2
3,498,727	+		Sama_2944	0.60	-0.3
3,498,728	-		Sama_2944	0.61	+0.9
3,498,741	+		Sama_2944	0.63	+0.1
3,498,741	+		Sama_2944	0.63	+0.2
3,498,741	+		Sama_2944	0.63	+1.8
3,498,741	+		Sama_2944	0.63	+1.5
3,498,741	+		Sama_2944	0.63	-0.2
3,498,742	-		Sama_2944	0.64	+2.0
3,498,742	-		Sama_2944	0.64	+0.2
3,498,742	-		Sama_2944	0.64	-0.3
3,498,742	-		Sama_2944	0.64	+1.3
3,498,742	-		Sama_2944	0.64	+0.7
3,498,745	+		Sama_2944	0.64	-1.4
3,498,746	-		Sama_2944	0.65	-0.2
3,498,746	-		Sama_2944	0.65	+0.5
3,498,746	-		Sama_2944	0.65	+1.4
3,498,756	+		Sama_2944	0.67	+0.4
3,498,756	+		Sama_2944	0.67	+0.1
3,498,756	+		Sama_2944	0.67	-1.1
3,498,757	-		Sama_2944	0.67	+1.3
3,498,777	+		Sama_2944	0.72	+0.9
3,498,778	-		Sama_2944	0.72	+1.2
3,498,778	-		Sama_2944	0.72	+0.4
3,498,778	-		Sama_2944	0.72	-1.4
3,498,778	-		Sama_2944	0.72	-0.3
3,498,778	-		Sama_2944	0.72	+1.3
3,498,778	-		Sama_2944	0.72	+0.3
3,498,778	-		Sama_2944	0.72	+1.2
3,498,778	-		Sama_2944	0.72	+2.4
3,498,779	+		Sama_2944	0.72	+0.3
3,498,779	+		Sama_2944	0.72	-0.5
3,498,779	+		Sama_2944	0.72	-1.5
3,498,780	-		Sama_2944	0.72	-0.1
3,498,780	-		Sama_2944	0.72	+0.4
3,498,780	-		Sama_2944	0.72	+1.1
3,498,780	-		Sama_2944	0.72	+1.1
3,498,780	-		Sama_2944	0.72	-2.0
3,498,895	-				-1.3
3,498,914	+				+0.4
3,498,934	+				-0.7
3,498,934	+				-0.8
3,498,934	+				-1.6
3,498,934	+				-2.1
3,498,934	+				-1.4
3,498,955	+				+0.1
3,498,955	+				-1.1
3,498,955	+				+0.7
3,498,956	-				+1.5
3,498,976	+				+0.7
3,498,977	-				+0.3
3,498,977	-				+0.7
3,499,038	-				+0.3
3,499,046	-				+0.1
3,499,046	-				-0.3
3,499,050	+				+0.8
3,499,050	+				-0.9
3,499,051	-				+0.1
3,499,153	-				-2.2
3,499,353	+		Sama_2945	0.12	-1.9
3,499,353	+		Sama_2945	0.12	-0.2
3,499,353	+		Sama_2945	0.12	-1.0
3,499,354	-		Sama_2945	0.12	-0.5
3,499,354	-		Sama_2945	0.12	+0.3
3,499,359	+		Sama_2945	0.12	+0.6
3,499,359	+		Sama_2945	0.12	+1.5
3,499,360	-		Sama_2945	0.12	+0.5
3,499,360	-		Sama_2945	0.12	-0.1
3,499,360	-		Sama_2945	0.12	-0.9
3,499,360	-		Sama_2945	0.12	+0.3
3,499,360	-		Sama_2945	0.12	-1.2
3,499,365	+		Sama_2945	0.12	+0.7
3,499,365	+		Sama_2945	0.12	-1.2
3,499,365	+		Sama_2945	0.12	-0.8
3,499,365	+		Sama_2945	0.12	-0.4
3,499,365	+		Sama_2945	0.12	+0.3
3,499,365	+		Sama_2945	0.12	-0.3
3,499,365	+		Sama_2945	0.12	+2.7
3,499,365	+		Sama_2945	0.12	-1.8
3,499,365	+		Sama_2945	0.12	+1.3
3,499,366	-		Sama_2945	0.12	+0.9
3,499,366	-		Sama_2945	0.12	+0.3
3,499,366	-		Sama_2945	0.12	+0.6
3,499,366	-		Sama_2945	0.12	-0.6
3,499,366	-		Sama_2945	0.12	+0.2
3,499,366	-		Sama_2945	0.12	+1.5
3,499,382	+		Sama_2945	0.13	+0.3
3,499,382	+		Sama_2945	0.13	+0.8
3,499,382	+		Sama_2945	0.13	+0.2
3,499,383	-		Sama_2945	0.13	-0.4
3,499,383	-		Sama_2945	0.13	-0.4
3,499,383	-		Sama_2945	0.13	+1.0
3,499,383	-		Sama_2945	0.13	-0.3
3,499,383	-		Sama_2945	0.13	-1.4
3,499,383	-		Sama_2945	0.13	+1.2
3,499,390	+		Sama_2945	0.13	-1.5
3,499,443	+		Sama_2945	0.15	-1.5
3,499,443	+		Sama_2945	0.15	-0.4
3,499,444	-		Sama_2945	0.15	+0.0
3,499,444	-		Sama_2945	0.15	+0.0
3,499,467	+		Sama_2945	0.16	+1.2
3,499,467	+		Sama_2945	0.16	+0.3
3,499,467	+		Sama_2945	0.16	-3.4
3,499,467	+		Sama_2945	0.16	-0.5
3,499,467	+		Sama_2945	0.16	-1.3
3,499,467	+		Sama_2945	0.16	-1.2
3,499,467	+		Sama_2945	0.16	-0.2
3,499,467	+		Sama_2945	0.16	-1.0
3,499,468	-		Sama_2945	0.16	+0.1
3,499,468	-		Sama_2945	0.16	-0.3
3,499,468	-		Sama_2945	0.16	-0.5
3,499,468	-		Sama_2945	0.16	+0.4
3,499,468	-		Sama_2945	0.16	+1.1
3,499,468	-		Sama_2945	0.16	+1.1
3,499,486	+		Sama_2945	0.17	-0.1
3,499,509	+		Sama_2945	0.18	-0.5
3,499,510	-		Sama_2945	0.18	-1.0
3,499,545	+		Sama_2945	0.19	+2.3
3,499,546	-		Sama_2945	0.19	-1.8
3,499,546	-		Sama_2945	0.19	+0.5
3,499,546	-		Sama_2945	0.19	-1.0
3,499,636	+		Sama_2945	0.23	+0.8
3,499,636	+		Sama_2945	0.23	-1.9
3,499,637	-		Sama_2945	0.23	+1.2
3,499,637	-		Sama_2945	0.23	-2.9
3,499,712	-		Sama_2945	0.26	-0.9
3,499,727	+		Sama_2945	0.26	-1.2
3,499,727	+		Sama_2945	0.26	-0.6
3,499,755	-		Sama_2945	0.27	-0.3
3,499,755	-		Sama_2945	0.27	+0.4
3,499,788	+		Sama_2945	0.28	-0.4
3,499,788	+		Sama_2945	0.28	+0.3
3,499,788	+		Sama_2945	0.28	+0.2
3,499,789	-		Sama_2945	0.28	+0.4
3,499,789	-		Sama_2945	0.28	-1.1
3,499,789	-		Sama_2945	0.28	-0.5
3,499,789	-		Sama_2945	0.28	+0.8
3,499,789	-		Sama_2945	0.28	-0.5
3,499,789	-		Sama_2945	0.28	-1.1