Strain Fitness in Shewanella amazonensis SB2B around Sama_1171

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,428,079	+		Sama_1170	0.35	+0.4
1,428,079	+		Sama_1170	0.35	+2.1
1,428,079	+		Sama_1170	0.35	+1.2
1,428,079	+		Sama_1170	0.35	+1.3
1,428,079	+		Sama_1170	0.35	+2.9
1,428,106	+		Sama_1170	0.38	+0.9
1,428,106	+		Sama_1170	0.38	+1.6
1,428,119	+		Sama_1170	0.39	+0.7
1,428,119	+		Sama_1170	0.39	+2.4
1,428,134	+		Sama_1170	0.41	-2.1
1,428,135	-		Sama_1170	0.41	+1.1
1,428,135	-		Sama_1170	0.41	+1.6
1,428,135	-		Sama_1170	0.41	+1.7
1,428,135	-		Sama_1170	0.41	+2.5
1,428,135	-		Sama_1170	0.41	+2.0
1,428,138	+		Sama_1170	0.41	+0.4
1,428,138	+		Sama_1170	0.41	+1.1
1,428,139	-		Sama_1170	0.41	+0.4
1,428,286	+		Sama_1170	0.57	+0.8
1,428,287	-		Sama_1170	0.57	+2.2
1,428,339	-		Sama_1170	0.63	+1.3
1,428,339	-		Sama_1170	0.63	+1.8
1,428,359	+		Sama_1170	0.65	+1.3
1,428,510	+		Sama_1170	0.81	+0.6
1,428,510	+		Sama_1170	0.81	+1.0
1,428,510	+		Sama_1170	0.81	+1.6
1,428,524	+		Sama_1170	0.83	+0.9
1,428,525	-		Sama_1170	0.83	+1.0
1,428,605	+				+0.2
1,428,605	+				+1.0
1,428,606	-				+0.3
1,428,624	+				+1.5
1,428,667	+				-1.9
1,428,667	+				+0.1
1,428,668	-				-1.0
1,428,678	+				+1.0
1,428,742	+				-1.5
1,428,777	-				+0.4
1,428,797	+				+3.8
1,428,798	-				+0.7
1,428,807	+				+0.2
1,428,807	+				-1.0
1,428,807	+				-1.2
1,428,807	+				-1.5
1,428,808	-				-0.3
1,428,839	+				+0.4
1,428,840	-				-0.2
1,428,862	+				-1.6
1,428,863	+				+0.4
1,428,863	+				-0.8
1,428,863	+				-0.0
1,428,863	+				-0.2
1,428,911	+				+1.0
1,428,911	+				-0.2
1,428,911	+				+1.1
1,428,912	-				-0.7
1,428,914	+				+1.1
1,428,915	-				+0.6
1,428,941	+				-1.4
1,428,941	+				-1.7
1,428,941	+				+0.6
1,428,942	-				-1.4
1,428,942	-				-1.7
1,428,942	-				+3.7
1,428,942	-				-0.3
1,428,942	-				+0.3
1,428,942	-				+0.7
1,428,945	+				+1.5
1,428,945	+				-0.1
1,428,945	+				-0.2
1,428,945	+				+0.8
1,428,948	+				+0.8
1,428,949	-				+1.0
1,428,964	+				-0.2
1,428,964	+				+0.2
1,428,983	+				-3.2
1,429,026	+				-0.2
1,429,054	+				+0.7
1,429,054	+				-0.1
1,429,054	+				+1.1
1,429,055	-				-0.2
1,429,059	+				-1.7
1,429,060	-				-0.2
1,429,105	+				+0.1
1,429,105	+				-0.7
1,429,106	-				+1.0
1,429,130	-				-1.7
1,429,269	+		Sama_1171	0.14	-0.3
1,429,270	-		Sama_1171	0.14	-1.7
1,429,270	-		Sama_1171	0.14	+0.2
1,429,270	-		Sama_1171	0.14	+0.2
1,429,271	+		Sama_1171	0.15	+0.1
1,429,271	+		Sama_1171	0.15	-0.7
1,429,271	+		Sama_1171	0.15	+0.8
1,429,272	-		Sama_1171	0.15	-1.2
1,429,316	+		Sama_1171	0.17	-2.7
1,429,316	+		Sama_1171	0.17	-0.9
1,429,317	-		Sama_1171	0.17	-0.0
1,429,317	-		Sama_1171	0.17	+0.1
1,429,317	-		Sama_1171	0.17	+1.0
1,429,317	-		Sama_1171	0.17	+1.2
1,429,364	+		Sama_1171	0.20	-0.4
1,429,365	-		Sama_1171	0.21	-1.6
1,429,365	-		Sama_1171	0.21	+0.8
1,429,373	+		Sama_1171	0.21	+2.2
1,429,374	-		Sama_1171	0.21	-0.7
1,429,439	+		Sama_1171	0.25	+0.0
1,429,439	+		Sama_1171	0.25	-1.4
1,429,439	+		Sama_1171	0.25	-1.4
1,429,439	+		Sama_1171	0.25	+0.3
1,429,482	+		Sama_1171	0.28	-2.2
1,429,483	-		Sama_1171	0.28	-2.2
1,429,485	+		Sama_1171	0.28	-1.6
1,429,486	-		Sama_1171	0.28	+0.5
1,429,486	-		Sama_1171	0.28	-2.2
1,429,486	-		Sama_1171	0.28	-2.0
1,429,487	+		Sama_1171	0.28	-0.7
1,429,487	+		Sama_1171	0.28	+1.3
1,429,488	-		Sama_1171	0.28	+0.1
1,429,488	-		Sama_1171	0.28	-2.5
1,429,488	-		Sama_1171	0.28	+0.3
1,429,488	-		Sama_1171	0.28	-0.2
1,429,509	+		Sama_1171	0.30	+0.7
1,429,572	+		Sama_1171	0.34	+0.9
1,429,572	+		Sama_1171	0.34	-2.3
1,429,572	+		Sama_1171	0.34	-0.1
1,429,573	-		Sama_1171	0.34	+1.6
1,429,668	+		Sama_1171	0.40	-1.2
1,429,669	-		Sama_1171	0.40	-1.0
1,429,687	+		Sama_1171	0.41	-1.0
1,429,687	+		Sama_1171	0.41	+0.2
1,429,688	-		Sama_1171	0.41	+0.6
1,429,688	-		Sama_1171	0.41	-0.6
1,429,770	+		Sama_1171	0.46	-0.2
1,429,771	-		Sama_1171	0.47	+0.7
1,429,827	-		Sama_1171	0.50	+0.0
1,429,870	+		Sama_1171	0.53	-0.3
1,429,889	+		Sama_1171	0.54	+1.4
1,429,889	+		Sama_1171	0.54	-0.6
1,430,057	-		Sama_1171	0.65	+0.1
1,430,103	+		Sama_1171	0.68	-1.2
1,430,103	+		Sama_1171	0.68	-2.0
1,430,104	-		Sama_1171	0.68	-0.3
1,430,189	+		Sama_1171	0.73	+0.0
1,430,190	-		Sama_1171	0.73	-1.0
1,430,190	-		Sama_1171	0.73	-0.6
1,430,190	-		Sama_1171	0.73	-2.1
1,430,190	-		Sama_1171	0.73	-1.0
1,430,255	+		Sama_1171	0.77	+1.5
1,430,255	+		Sama_1171	0.77	-1.1
1,430,255	+		Sama_1171	0.77	+1.3
1,430,256	-		Sama_1171	0.78	+0.1
1,430,258	+		Sama_1171	0.78	-1.6
1,430,258	+		Sama_1171	0.78	-1.8
1,430,258	+		Sama_1171	0.78	+1.1
1,430,258	+		Sama_1171	0.78	+0.4
1,430,258	+		Sama_1171	0.78	-0.9
1,430,258	+		Sama_1171	0.78	-0.5
1,430,258	+		Sama_1171	0.78	+0.1
1,430,259	-		Sama_1171	0.78	+0.7
1,430,259	-		Sama_1171	0.78	-0.7
1,430,259	-		Sama_1171	0.78	-1.2
1,430,259	-		Sama_1171	0.78	-0.8
1,430,259	-		Sama_1171	0.78	-1.3
1,430,259	-		Sama_1171	0.78	-1.2
1,430,279	+		Sama_1171	0.79	-0.6
1,430,279	+		Sama_1171	0.79	-0.2
1,430,280	-		Sama_1171	0.79	+1.2
1,430,280	-		Sama_1171	0.79	+0.6
1,430,366	-		Sama_1171	0.85	-0.4
1,430,396	+		Sama_1171	0.87	+0.1
1,430,463	+				-0.2
1,430,500	-				+0.5
1,430,516	+				+0.3
1,430,527	+				-0.4
1,430,528	-				-1.4
1,430,664	-				+0.5
1,430,664	-				+1.0
1,430,690	+				+0.4
1,430,727	+				+0.4
1,430,748	+				+1.2
1,430,749	-				-1.2
1,430,749	-				-1.2
1,430,749	-				+2.6
1,430,749	-				-0.6
1,430,753	+				-0.7
1,430,753	+				+0.7
1,430,753	+				+1.4
1,430,754	-				-1.0
1,430,764	-				-1.2
1,430,764	-				+0.3
1,430,805	-				-2.3
1,430,811	+				+0.8
1,430,849	+				-0.6
1,430,849	+				+0.1
1,430,849	+				+0.9
1,430,849	+				-2.9
1,430,849	+				-0.4
1,430,850	-				-1.7
1,430,850	-				+1.0
1,430,850	-				-1.7
1,430,850	-				+1.6
1,430,850	-				-0.3
1,430,850	-				-1.3
1,430,850	-				+2.4
1,430,850	-				+1.3
1,430,855	+				-1.7
1,430,855	+				+0.6
1,430,855	+				+0.4
1,430,856	-				+1.1
1,430,856	-				-0.8
1,430,888	+				-1.2
1,430,888	+				+0.7
1,430,889	-				-0.9
1,430,889	-				+2.0
1,430,889	-				-1.6
1,430,889	-				-0.1
1,430,889	-				+0.6
1,430,889	-				+0.9
1,430,894	+				+0.4
1,430,894	+				-1.3
1,430,895	-				+1.9
1,430,895	-				-0.8
1,430,895	-				+0.7
1,430,897	+				+0.9
1,430,897	+				-1.7
1,430,897	+				+0.2
1,430,897	+				-0.3
1,430,898	-				+1.0
1,430,898	-				-0.5
1,430,936	+		Sama_1172	0.11	+0.8
1,430,936	+		Sama_1172	0.11	+0.6
1,430,937	-		Sama_1172	0.11	+0.3
1,430,974	+		Sama_1172	0.13	-0.4
1,430,974	+		Sama_1172	0.13	-1.2
1,430,974	+		Sama_1172	0.13	+0.1
1,430,975	-		Sama_1172	0.13	-1.3
1,431,080	+		Sama_1172	0.18	-0.1
1,431,080	+		Sama_1172	0.18	+0.9
1,431,080	+		Sama_1172	0.18	-1.2
1,431,081	-		Sama_1172	0.18	+0.8
1,431,081	-		Sama_1172	0.18	-0.6
1,431,081	-		Sama_1172	0.18	-1.2
1,431,081	-		Sama_1172	0.18	-1.4
1,431,081	-		Sama_1172	0.18	-1.0
1,431,081	-		Sama_1172	0.18	+1.0
1,431,105	+		Sama_1172	0.19	+0.3
1,431,179	+		Sama_1172	0.23	-1.1
1,431,179	+		Sama_1172	0.23	+0.7
1,431,179	+		Sama_1172	0.23	+0.8
1,431,180	-		Sama_1172	0.23	+0.4
1,431,180	-		Sama_1172	0.23	+1.3
1,431,180	-		Sama_1172	0.23	+0.3
1,431,180	-		Sama_1172	0.23	-0.5
1,431,278	+		Sama_1172	0.27	+0.8
1,431,278	+		Sama_1172	0.27	-1.4
1,431,279	-		Sama_1172	0.27	+0.6
1,431,347	+		Sama_1172	0.31	+1.4
1,431,348	-		Sama_1172	0.31	+1.9
1,431,348	-		Sama_1172	0.31	-1.1
1,431,497	+		Sama_1172	0.37	-0.0
1,431,497	+		Sama_1172	0.37	-0.6
1,431,497	+		Sama_1172	0.37	-1.1
1,431,498	-		Sama_1172	0.38	+1.3
1,431,547	+		Sama_1172	0.40	-0.9
1,431,547	+		Sama_1172	0.40	-0.6
1,431,560	+		Sama_1172	0.40	-0.0
1,431,561	-		Sama_1172	0.40	+1.3
1,431,561	-		Sama_1172	0.40	+1.6
1,431,563	-		Sama_1172	0.41	+0.3
1,431,599	+		Sama_1172	0.42	+0.0