Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33550

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,514,462	-		PGA1_c33540	0.14	+1.0
3,514,462	-		PGA1_c33540	0.14	+0.3
3,514,483	+		PGA1_c33540	0.16	-1.9
3,514,508	-		PGA1_c33540	0.18	-0.1
3,514,529	+		PGA1_c33540	0.20	+0.9
3,514,647	+		PGA1_c33540	0.31	-0.4
3,514,647	+		PGA1_c33540	0.31	+1.7
3,514,647	+		PGA1_c33540	0.31	+0.5
3,514,647	+		PGA1_c33540	0.31	+0.4
3,514,671	+		PGA1_c33540	0.33	-0.3
3,514,671	+		PGA1_c33540	0.33	+0.6
3,514,673	+		PGA1_c33540	0.33	-2.4
3,514,740	-		PGA1_c33540	0.40	-1.5
3,514,747	-		PGA1_c33540	0.40	+2.7
3,514,747	-		PGA1_c33540	0.40	+0.6
3,514,794	+		PGA1_c33540	0.45	-1.5
3,514,794	+		PGA1_c33540	0.45	-1.1
3,514,794	+		PGA1_c33540	0.45	+1.3
3,514,794	+		PGA1_c33540	0.45	-1.0
3,514,802	-		PGA1_c33540	0.45	+0.5
3,514,802	-		PGA1_c33540	0.45	+1.4
3,514,842	+		PGA1_c33540	0.49	+1.2
3,514,860	+		PGA1_c33540	0.51	-1.4
3,514,863	-		PGA1_c33540	0.51	-0.6
3,514,868	-		PGA1_c33540	0.51	-1.1
3,514,868	-		PGA1_c33540	0.51	+2.5
3,514,873	-		PGA1_c33540	0.52	-2.2
3,514,891	-		PGA1_c33540	0.54	+1.3
3,514,973	-		PGA1_c33540	0.61	+0.4
3,515,030	+		PGA1_c33540	0.67	-1.2
3,515,156	+		PGA1_c33540	0.78	+1.4
3,515,156	+		PGA1_c33540	0.78	-0.5
3,515,350	-				+1.1
3,515,363	+				-0.1
3,515,363	+				+0.2
3,515,371	-				-0.4
3,515,414	-				-2.2
3,515,465	-				+2.2
3,515,465	-				+1.7
3,515,478	-				-1.2
3,515,579	+		PGA1_c33550	0.10	+0.5
3,515,580	+		PGA1_c33550	0.11	+1.1
3,515,626	+		PGA1_c33550	0.14	-1.0
3,515,675	-		PGA1_c33550	0.19	+1.0
3,515,685	+		PGA1_c33550	0.20	+1.5
3,515,693	-		PGA1_c33550	0.20	-1.5
3,515,697	+		PGA1_c33550	0.21	-0.1
3,515,709	+		PGA1_c33550	0.22	+2.0
3,515,731	-		PGA1_c33550	0.23	-0.9
3,515,746	-		PGA1_c33550	0.25	+3.7
3,515,762	+		PGA1_c33550	0.26	-2.0
3,515,789	+		PGA1_c33550	0.28	-2.3
3,515,828	-		PGA1_c33550	0.32	+2.5
3,515,844	-		PGA1_c33550	0.33	+1.5
3,515,928	-		PGA1_c33550	0.40	+1.4
3,516,005	+		PGA1_c33550	0.47	-0.3
3,516,010	+		PGA1_c33550	0.47	+1.5
3,516,083	+		PGA1_c33550	0.54	+1.3
3,516,083	+		PGA1_c33550	0.54	+0.2
3,516,083	+		PGA1_c33550	0.54	+1.7
3,516,083	+		PGA1_c33550	0.54	+2.4
3,516,083	+		PGA1_c33550	0.54	+1.6
3,516,083	+		PGA1_c33550	0.54	-1.2
3,516,083	+		PGA1_c33550	0.54	+0.9
3,516,088	+		PGA1_c33550	0.54	-2.1
3,516,091	-		PGA1_c33550	0.54	+1.4
3,516,091	-		PGA1_c33550	0.54	+0.8
3,516,091	-		PGA1_c33550	0.54	+1.6
3,516,134	-		PGA1_c33550	0.58	+0.2
3,516,159	-		PGA1_c33550	0.60	+0.4
3,516,235	+		PGA1_c33550	0.67	+1.1
3,516,235	+		PGA1_c33550	0.67	+0.8
3,516,235	+		PGA1_c33550	0.67	-0.8
3,516,243	-		PGA1_c33550	0.67	-0.6
3,516,243	-		PGA1_c33550	0.67	-1.6
3,516,248	-		PGA1_c33550	0.68	+1.8
3,516,249	+		PGA1_c33550	0.68	+2.5
3,516,253	-		PGA1_c33550	0.68	+1.3
3,516,253	-		PGA1_c33550	0.68	-0.6
3,516,257	-		PGA1_c33550	0.69	+0.6
3,516,335	-		PGA1_c33550	0.75	-0.1
3,516,374	+		PGA1_c33550	0.79	+1.6
3,516,387	-		PGA1_c33550	0.80	+1.8
3,516,432	+		PGA1_c33550	0.84	-0.2
3,516,435	-		PGA1_c33550	0.84	+2.3
3,516,525	+				-1.2
3,516,535	+				-2.2
3,516,535	+				+1.4
3,516,545	-				-1.1
3,516,594	+				-2.1
3,516,594	+				+1.7
3,516,602	-				-2.0
3,516,620	-				-0.8
3,516,650	-				-1.6
3,516,652	+				+0.1
3,516,652	+				+0.8
3,516,652	+				+3.1
3,516,652	+				+0.4
3,516,660	-				-2.0
3,516,717	+				+0.4
3,516,725	-				+0.4
3,516,725	-				+0.2
3,516,796	+		PGA1_c33560	0.15	-1.2
3,516,826	+		PGA1_c33560	0.17	+0.3
3,516,850	-		PGA1_c33560	0.19	+0.8
3,516,852	+		PGA1_c33560	0.19	+0.7
3,516,857	+		PGA1_c33560	0.19	+3.5
3,516,865	-		PGA1_c33560	0.20	+1.3
3,516,865	-		PGA1_c33560	0.20	-2.6
3,516,865	-		PGA1_c33560	0.20	+0.6
3,516,892	-		PGA1_c33560	0.22	+1.6
3,516,974	-		PGA1_c33560	0.28	-0.1
3,516,999	-		PGA1_c33560	0.29	+0.2
3,517,001	+		PGA1_c33560	0.30	+2.2
3,517,001	+		PGA1_c33560	0.30	+2.2
3,517,001	+		PGA1_c33560	0.30	+1.8
3,517,001	+		PGA1_c33560	0.30	+0.4
3,517,001	+		PGA1_c33560	0.30	-1.4
3,517,001	+		PGA1_c33560	0.30	+0.9
3,517,009	-		PGA1_c33560	0.30	-0.7
3,517,009	-		PGA1_c33560	0.30	-1.9
3,517,009	-		PGA1_c33560	0.30	+1.0
3,517,009	-		PGA1_c33560	0.30	-0.1
3,517,009	-		PGA1_c33560	0.30	+0.2
3,517,033	-		PGA1_c33560	0.32	+1.4
3,517,040	-		PGA1_c33560	0.32	+1.8
3,517,061	-		PGA1_c33560	0.34	-0.8
3,517,128	+		PGA1_c33560	0.38	-3.1
3,517,136	-		PGA1_c33560	0.39	-2.2
3,517,140	+		PGA1_c33560	0.39	+2.2
3,517,140	+		PGA1_c33560	0.39	-1.9
3,517,150	+		PGA1_c33560	0.40	-0.9
3,517,189	-		PGA1_c33560	0.43	+0.6
3,517,240	-		PGA1_c33560	0.46	-0.6
3,517,249	+		PGA1_c33560	0.47	-2.0
3,517,274	-		PGA1_c33560	0.49	+1.2
3,517,283	-		PGA1_c33560	0.49	+1.1
3,517,298	+		PGA1_c33560	0.51	+0.5
3,517,306	-		PGA1_c33560	0.51	+0.7
3,517,341	-		PGA1_c33560	0.54	-0.4
3,517,433	+		PGA1_c33560	0.60	-0.6
3,517,502	-		PGA1_c33560	0.65	+0.8
3,517,517	+		PGA1_c33560	0.66	-2.1
3,517,517	+		PGA1_c33560	0.66	+0.6
3,517,517	+		PGA1_c33560	0.66	-0.0
3,517,517	+		PGA1_c33560	0.66	+0.8
3,517,525	-		PGA1_c33560	0.67	-0.1
3,517,533	-		PGA1_c33560	0.67	-1.1
3,517,560	+		PGA1_c33560	0.69	+0.2
3,517,573	-		PGA1_c33560	0.70	+1.6