Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33120

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,470,952	+		PGA1_c33110	0.65	+0.6
3,470,961	+		PGA1_c33110	0.65	-2.0
3,470,977	+		PGA1_c33110	0.66	+1.4
3,470,979	-		PGA1_c33110	0.66	+0.8
3,470,998	-		PGA1_c33110	0.67	+0.4
3,471,033	-		PGA1_c33110	0.68	-2.4
3,471,079	-		PGA1_c33110	0.70	+1.2
3,471,081	+		PGA1_c33110	0.70	+1.1
3,471,163	+		PGA1_c33110	0.74	-0.6
3,471,172	+		PGA1_c33110	0.74	+0.1
3,471,180	+		PGA1_c33110	0.74	-1.3
3,471,180	+		PGA1_c33110	0.74	+1.3
3,471,193	-		PGA1_c33110	0.75	+1.1
3,471,317	-		PGA1_c33110	0.80	-3.5
3,471,322	+		PGA1_c33110	0.80	-0.6
3,471,322	+		PGA1_c33110	0.80	+0.4
3,471,322	+		PGA1_c33110	0.80	-2.0
3,471,322	+		PGA1_c33110	0.80	+0.7
3,471,322	+		PGA1_c33110	0.80	-0.4
3,471,322	+		PGA1_c33110	0.80	-0.6
3,471,322	+		PGA1_c33110	0.80	-1.0
3,471,322	+		PGA1_c33110	0.80	-1.0
3,471,322	+		PGA1_c33110	0.80	+1.3
3,471,330	-		PGA1_c33110	0.80	+0.3
3,471,330	-		PGA1_c33110	0.80	+2.3
3,471,330	-		PGA1_c33110	0.80	+2.5
3,471,330	-		PGA1_c33110	0.80	+1.9
3,471,330	-		PGA1_c33110	0.80	-2.5
3,471,330	-		PGA1_c33110	0.80	-2.6
3,471,521	+		PGA1_c33110	0.88	-1.0
3,471,529	-		PGA1_c33110	0.89	+1.5
3,471,529	-		PGA1_c33110	0.89	-0.1
3,471,565	+				+0.8
3,471,593	+				+0.8
3,471,594	-				-2.2
3,471,647	-				-2.7
3,471,653	+				-2.5
3,471,712	-				+1.3
3,471,712	-				-0.5
3,471,734	+				+2.1
3,471,781	+				+0.4
3,471,825	-				+1.0
3,471,846	+				+0.8
3,471,846	+				-1.4
3,471,846	+				+0.0
3,471,905	+				-2.8
3,471,905	+				-2.4
3,471,907	+				+1.3
3,471,910	-				-1.7
3,471,939	+				-0.6
3,471,975	-				-1.8
3,472,072	+		PGA1_c33120	0.15	+0.1
3,472,106	-		PGA1_c33120	0.18	+0.1
3,472,106	-		PGA1_c33120	0.18	-1.6
3,472,230	+		PGA1_c33120	0.30	+0.5
3,472,242	-		PGA1_c33120	0.31	-1.8
3,472,253	+		PGA1_c33120	0.33	+0.1
3,472,285	-		PGA1_c33120	0.36	+3.2
3,472,317	+		PGA1_c33120	0.39	-0.7
3,472,325	-		PGA1_c33120	0.40	+2.4
3,472,326	-		PGA1_c33120	0.40	-1.4
3,472,351	+		PGA1_c33120	0.42	-1.4
3,472,351	+		PGA1_c33120	0.42	+0.4
3,472,351	+		PGA1_c33120	0.42	+1.5
3,472,351	+		PGA1_c33120	0.42	+1.3
3,472,359	-		PGA1_c33120	0.43	-1.6
3,472,359	-		PGA1_c33120	0.43	+1.3
3,472,416	+		PGA1_c33120	0.48	-0.8
3,472,431	+		PGA1_c33120	0.50	-3.6
3,472,431	+		PGA1_c33120	0.50	+2.4
3,472,431	+		PGA1_c33120	0.50	+4.2
3,472,431	+		PGA1_c33120	0.50	-2.4
3,472,431	+		PGA1_c33120	0.50	-0.4
3,472,431	+		PGA1_c33120	0.50	+1.2
3,472,439	-		PGA1_c33120	0.51	-0.2
3,472,439	-		PGA1_c33120	0.51	-0.3
3,472,439	-		PGA1_c33120	0.51	+0.7
3,472,439	-		PGA1_c33120	0.51	+0.7
3,472,439	-		PGA1_c33120	0.51	-1.0
3,472,439	-		PGA1_c33120	0.51	-0.1
3,472,439	-		PGA1_c33120	0.51	-2.3
3,472,439	-		PGA1_c33120	0.51	-0.6
3,472,458	-		PGA1_c33120	0.52	-0.9
3,472,476	+		PGA1_c33120	0.54	-1.9
3,472,481	+		PGA1_c33120	0.55	-2.0
3,472,484	-		PGA1_c33120	0.55	-1.0
3,472,484	-		PGA1_c33120	0.55	-2.1
3,472,530	-		PGA1_c33120	0.59	+2.9
3,472,530	-		PGA1_c33120	0.59	-2.3
3,472,559	-		PGA1_c33120	0.62	-1.1
3,472,623	-		PGA1_c33120	0.69	+2.1
3,472,623	-		PGA1_c33120	0.69	+1.9
3,472,630	+		PGA1_c33120	0.69	+1.6
3,472,640	+		PGA1_c33120	0.70	+0.4
3,472,640	+		PGA1_c33120	0.70	-2.9
3,472,648	-		PGA1_c33120	0.71	-0.0
3,472,648	-		PGA1_c33120	0.71	-2.1
3,472,650	+		PGA1_c33120	0.71	+0.0
3,472,663	-		PGA1_c33120	0.72	+0.2
3,472,673	-		PGA1_c33120	0.73	-3.0
3,472,718	+		PGA1_c33120	0.78	+0.7
3,472,752	+		PGA1_c33120	0.81	-1.3
3,472,752	+		PGA1_c33120	0.81	-0.1
3,472,762	-		PGA1_c33120	0.82	-2.4
3,472,827	-		PGA1_c33120	0.88	+0.1
3,472,847	+				-1.0
3,472,901	-				-1.4
3,472,915	+				-2.5
3,472,922	-				-1.7
3,472,922	-				-2.6
3,472,922	-				+1.5
3,472,922	-				-0.3
3,472,922	-				-0.0
3,472,922	-				-1.1
3,472,965	-				+1.7
3,472,972	-				+1.2
3,473,162	+				-0.2
3,473,196	+		PGA1_c33130	0.11	-1.0
3,473,196	+		PGA1_c33130	0.11	-1.4
3,473,204	-		PGA1_c33130	0.11	+1.9
3,473,204	-		PGA1_c33130	0.11	-0.6
3,473,204	-		PGA1_c33130	0.11	+1.1
3,473,204	-		PGA1_c33130	0.11	-0.6
3,473,275	+		PGA1_c33130	0.14	-0.1
3,473,282	-		PGA1_c33130	0.15	-1.6
3,473,285	+		PGA1_c33130	0.15	+0.4
3,473,314	-		PGA1_c33130	0.16	+0.5
3,473,327	-		PGA1_c33130	0.16	-1.6
3,473,435	-		PGA1_c33130	0.21	+2.7
3,473,444	+		PGA1_c33130	0.21	+0.3
3,473,450	-		PGA1_c33130	0.21	-1.7
3,473,511	+		PGA1_c33130	0.24	-1.8
3,473,534	-		PGA1_c33130	0.25	-3.0
3,473,535	-		PGA1_c33130	0.25	-2.4
3,473,541	-		PGA1_c33130	0.25	+1.2
3,473,541	-		PGA1_c33130	0.25	+2.4
3,473,563	-		PGA1_c33130	0.26	-2.1
3,473,611	+		PGA1_c33130	0.28	+0.9
3,473,621	+		PGA1_c33130	0.28	+0.4
3,473,700	-		PGA1_c33130	0.32	+0.4
3,473,714	-		PGA1_c33130	0.32	-0.2
3,473,718	+		PGA1_c33130	0.32	+0.1
3,473,720	+		PGA1_c33130	0.32	-0.4
3,473,728	-		PGA1_c33130	0.33	-1.8
3,473,797	-		PGA1_c33130	0.36	+2.0
3,473,804	+		PGA1_c33130	0.36	+0.5
3,473,804	+		PGA1_c33130	0.36	-1.6
3,473,845	+		PGA1_c33130	0.38	+1.2
3,473,891	-		PGA1_c33130	0.39	-2.1
3,473,931	+		PGA1_c33130	0.41	+0.2
3,473,937	+		PGA1_c33130	0.41	-1.8
3,473,945	-		PGA1_c33130	0.42	+0.1