Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13710

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,413,186	-		PGA1_c13690	0.27	-0.2
1,413,186	-		PGA1_c13690	0.27	+1.5
1,413,195	+		PGA1_c13690	0.28	+1.9
1,413,203	+		PGA1_c13690	0.28	+0.3
1,413,210	+		PGA1_c13690	0.29	-2.2
1,413,258	-		PGA1_c13690	0.34	-1.6
1,413,268	-		PGA1_c13690	0.35	+0.4
1,413,271	+		PGA1_c13690	0.36	-0.7
1,413,277	+		PGA1_c13690	0.36	+2.5
1,413,278	-		PGA1_c13690	0.36	+0.9
1,413,279	-		PGA1_c13690	0.37	+0.3
1,413,291	+		PGA1_c13690	0.38	+0.2
1,413,305	+		PGA1_c13690	0.39	-0.7
1,413,348	+		PGA1_c13690	0.44	+0.9
1,413,351	-		PGA1_c13690	0.44	+0.4
1,413,406	-		PGA1_c13690	0.50	+0.1
1,413,470	+		PGA1_c13690	0.57	-1.9
1,413,472	+		PGA1_c13690	0.57	+2.2
1,413,472	+		PGA1_c13690	0.57	+0.3
1,413,473	-		PGA1_c13690	0.57	-2.4
1,413,480	-		PGA1_c13690	0.58	-0.3
1,413,480	-		PGA1_c13690	0.58	-2.6
1,413,513	+		PGA1_c13690	0.62	+0.1
1,413,529	+		PGA1_c13690	0.64	-2.6
1,413,529	+		PGA1_c13690	0.64	+0.2
1,413,529	+		PGA1_c13690	0.64	+0.3
1,413,529	+		PGA1_c13690	0.64	-2.2
1,413,537	-		PGA1_c13690	0.64	+1.6
1,413,538	+		PGA1_c13690	0.65	+2.7
1,413,539	-		PGA1_c13690	0.65	+3.3
1,413,554	+		PGA1_c13690	0.66	-3.0
1,413,573	+		PGA1_c13690	0.68	-2.1
1,413,573	+		PGA1_c13690	0.68	-2.4
1,413,573	+		PGA1_c13690	0.68	-2.5
1,413,603	-		PGA1_c13690	0.72	+1.4
1,413,609	-		PGA1_c13690	0.72	-2.2
1,413,616	+		PGA1_c13690	0.73	-1.4
1,413,659	+		PGA1_c13690	0.78	+0.3
1,413,699	-		PGA1_c13690	0.82	-0.6
1,413,705	-		PGA1_c13690	0.83	+0.1
1,413,739	-		PGA1_c13690	0.86	-0.3
1,413,765	-		PGA1_c13690	0.89	-0.1
1,413,770	+		PGA1_c13690	0.90	+2.3
1,413,851	+				+0.7
1,413,865	-				-1.0
1,413,890	-				-0.6
1,413,907	-				+0.8
1,413,948	-		PGA1_c13700	0.17	+1.2
1,413,948	-		PGA1_c13700	0.17	+0.6
1,413,959	-		PGA1_c13700	0.21	+0.0
1,413,962	+		PGA1_c13700	0.22	-2.6
1,414,026	-		PGA1_c13700	0.45	-0.4
1,414,026	-		PGA1_c13700	0.45	+0.4
1,414,053	-		PGA1_c13700	0.54	+2.6
1,414,101	+		PGA1_c13700	0.71	-0.1
1,414,101	+		PGA1_c13700	0.71	-2.3
1,414,109	-		PGA1_c13700	0.74	+0.5
1,414,126	+		PGA1_c13700	0.80	-1.0
1,414,126	+		PGA1_c13700	0.80	-0.7
1,414,133	+		PGA1_c13700	0.83	+0.2
1,414,160	-				-2.6
1,414,174	+				-1.7
1,414,174	+				+3.2
1,414,259	-				-2.1
1,414,275	+				+1.1
1,414,283	-				-1.0
1,414,303	+				-0.2
1,414,342	+				+0.8
1,414,348	+				-0.3
1,414,350	-				+0.7
1,414,350	-				+1.8
1,414,355	-				+0.5
1,414,410	+				-1.4
1,414,449	-		PGA1_c13710	0.11	+1.4
1,414,486	+		PGA1_c13710	0.12	-0.6
1,414,491	+		PGA1_c13710	0.12	+1.8
1,414,491	+		PGA1_c13710	0.12	+0.6
1,414,491	+		PGA1_c13710	0.12	+0.4
1,414,499	-		PGA1_c13710	0.13	+0.8
1,414,560	+		PGA1_c13710	0.15	+0.7
1,414,649	-		PGA1_c13710	0.19	-2.1
1,414,660	+		PGA1_c13710	0.19	-0.3
1,414,684	+		PGA1_c13710	0.20	-4.4
1,414,712	+		PGA1_c13710	0.21	+1.8
1,414,716	-		PGA1_c13710	0.21	-2.6
1,414,753	+		PGA1_c13710	0.23	+1.5
1,414,765	+		PGA1_c13710	0.23	-1.6
1,414,765	+		PGA1_c13710	0.23	-0.8
1,414,765	+		PGA1_c13710	0.23	+0.6
1,414,765	+		PGA1_c13710	0.23	+1.1
1,414,765	+		PGA1_c13710	0.23	-1.4
1,414,773	-		PGA1_c13710	0.24	+1.6
1,414,773	-		PGA1_c13710	0.24	+1.1
1,414,797	+		PGA1_c13710	0.25	-1.6
1,414,840	+		PGA1_c13710	0.26	+1.6
1,414,848	-		PGA1_c13710	0.27	+2.3
1,414,911	+		PGA1_c13710	0.29	+0.5
1,414,927	+		PGA1_c13710	0.30	+0.3
1,414,927	+		PGA1_c13710	0.30	-0.2
1,414,953	+		PGA1_c13710	0.31	-2.1
1,414,961	-		PGA1_c13710	0.31	-0.7
1,414,961	-		PGA1_c13710	0.31	-0.9
1,414,968	-		PGA1_c13710	0.31	+1.4
1,415,006	-		PGA1_c13710	0.33	+0.0
1,415,006	-		PGA1_c13710	0.33	+0.8
1,415,009	+		PGA1_c13710	0.33	-0.2
1,415,041	+		PGA1_c13710	0.34	+0.7
1,415,041	+		PGA1_c13710	0.34	-0.7
1,415,041	+		PGA1_c13710	0.34	+0.6
1,415,044	+		PGA1_c13710	0.35	+0.2
1,415,044	+		PGA1_c13710	0.35	+0.6
1,415,044	+		PGA1_c13710	0.35	+0.7
1,415,044	+		PGA1_c13710	0.35	-1.4
1,415,044	+		PGA1_c13710	0.35	+0.7
1,415,052	-		PGA1_c13710	0.35	-0.5
1,415,052	-		PGA1_c13710	0.35	+0.6
1,415,052	-		PGA1_c13710	0.35	+0.7
1,415,052	-		PGA1_c13710	0.35	-2.3
1,415,052	-		PGA1_c13710	0.35	+0.1
1,415,052	-		PGA1_c13710	0.35	+0.3
1,415,063	+		PGA1_c13710	0.35	+1.4
1,415,124	+		PGA1_c13710	0.38	-1.2
1,415,204	+		PGA1_c13710	0.41	+0.5
1,415,204	+		PGA1_c13710	0.41	+0.3
1,415,204	+		PGA1_c13710	0.41	+1.2
1,415,207	-		PGA1_c13710	0.41	-2.0
1,415,212	-		PGA1_c13710	0.41	+0.6
1,415,212	-		PGA1_c13710	0.41	-2.7
1,415,212	-		PGA1_c13710	0.41	-1.2
1,415,212	-		PGA1_c13710	0.41	-1.4
1,415,223	-		PGA1_c13710	0.42	+1.0
1,415,249	+		PGA1_c13710	0.43	-1.7
1,415,264	+		PGA1_c13710	0.43	+0.3
1,415,267	-		PGA1_c13710	0.44	-1.6
1,415,362	+		PGA1_c13710	0.47	-2.5
1,415,424	-		PGA1_c13710	0.50	-1.2
1,415,424	-		PGA1_c13710	0.50	+1.8
1,415,449	-		PGA1_c13710	0.51	+0.5
1,415,577	+		PGA1_c13710	0.56	+0.7
1,415,627	-		PGA1_c13710	0.58	+0.6
1,415,627	-		PGA1_c13710	0.58	-3.5
1,415,627	-		PGA1_c13710	0.58	-0.6
1,415,642	-		PGA1_c13710	0.59	-2.4
1,415,662	+		PGA1_c13710	0.59	+1.7
1,415,662	+		PGA1_c13710	0.59	+1.3
1,415,662	+		PGA1_c13710	0.59	-0.3
1,415,670	-		PGA1_c13710	0.60	+1.1
1,415,670	-		PGA1_c13710	0.60	-1.0
1,415,728	+		PGA1_c13710	0.62	+1.1
1,415,728	+		PGA1_c13710	0.62	+1.6
1,415,736	-		PGA1_c13710	0.62	+1.8
1,415,736	-		PGA1_c13710	0.62	-2.1
1,415,736	-		PGA1_c13710	0.62	-0.1
1,415,752	+		PGA1_c13710	0.63	+1.4
1,415,777	+		PGA1_c13710	0.64	-2.2
1,415,785	+		PGA1_c13710	0.64	-0.3
1,415,795	+		PGA1_c13710	0.65	-3.5
1,415,822	+		PGA1_c13710	0.66	+0.6
1,415,837	+		PGA1_c13710	0.66	+1.7
1,415,845	-		PGA1_c13710	0.67	+1.0
1,415,852	+		PGA1_c13710	0.67	+2.2
1,416,057	-		PGA1_c13710	0.75	+0.6
1,416,062	-		PGA1_c13710	0.75	+2.3
1,416,097	-		PGA1_c13710	0.77	+2.2
1,416,106	-		PGA1_c13710	0.77	+2.2
1,416,106	-		PGA1_c13710	0.77	-2.9
1,416,154	+		PGA1_c13710	0.79	-1.4
1,416,159	+		PGA1_c13710	0.79	+0.5
1,416,167	-		PGA1_c13710	0.80	-1.2
1,416,167	-		PGA1_c13710	0.80	+0.7
1,416,169	+		PGA1_c13710	0.80	+1.5
1,416,169	+		PGA1_c13710	0.80	-0.1
1,416,177	-		PGA1_c13710	0.80	+2.0
1,416,266	+		PGA1_c13710	0.84	+1.5
1,416,322	-		PGA1_c13710	0.86	+0.2
1,416,331	+		PGA1_c13710	0.86	+0.4
1,416,331	+		PGA1_c13710	0.86	-1.7
1,416,339	-		PGA1_c13710	0.87	+0.1
1,416,405	-		PGA1_c13710	0.89	+1.1
1,416,405	-		PGA1_c13710	0.89	+0.7
1,416,419	+		PGA1_c13710	0.90	+0.3
1,416,426	-				+2.0
1,416,427	-				+1.0
1,416,459	-				+0.4
1,416,556	+				+1.8
1,416,636	+				-1.4
1,416,644	-				+1.6
1,416,652	+				-1.0
1,416,652	+				+0.3
1,416,652	-				+0.0
1,416,652	-				-1.4
1,416,660	-				-3.3
1,416,663	+				+1.0
1,416,741	+				+1.3
1,416,767	+		PGA1_c13720	0.11	+1.3
1,416,767	+		PGA1_c13720	0.11	+1.2
1,416,767	-		PGA1_c13720	0.11	-2.1
1,416,775	-		PGA1_c13720	0.12	+1.1
1,416,827	+		PGA1_c13720	0.18	-3.0
1,416,835	-		PGA1_c13720	0.19	-3.4
1,416,835	-		PGA1_c13720	0.19	-3.4
1,416,840	-		PGA1_c13720	0.20	+2.0
1,416,869	+		PGA1_c13720	0.23	+1.3
1,416,906	+		PGA1_c13720	0.27	+0.8
1,416,906	+		PGA1_c13720	0.27	+0.0
1,416,906	+		PGA1_c13720	0.27	-0.1
1,416,914	-		PGA1_c13720	0.28	-2.9
1,416,914	-		PGA1_c13720	0.28	+1.9
1,416,999	+		PGA1_c13720	0.38	+1.2
1,416,999	+		PGA1_c13720	0.38	+0.5
1,417,000	+		PGA1_c13720	0.38	+2.3
1,417,007	-		PGA1_c13720	0.39	+0.8
1,417,007	-		PGA1_c13720	0.39	+1.5
1,417,069	+		PGA1_c13720	0.46	+1.2
1,417,100	-		PGA1_c13720	0.49	-1.6
1,417,109	+		PGA1_c13720	0.50	+0.0
1,417,110	-		PGA1_c13720	0.50	+1.4
1,417,175	-		PGA1_c13720	0.58	+1.2
1,417,185	-		PGA1_c13720	0.59	+1.1
1,417,214	+		PGA1_c13720	0.62	+2.0
1,417,248	+		PGA1_c13720	0.66	+1.5
1,417,360	-		PGA1_c13720	0.79	+1.9
1,417,361	-		PGA1_c13720	0.79	-2.1
1,417,362	+		PGA1_c13720	0.79	-0.2
1,417,365	-		PGA1_c13720	0.80	-0.7
1,417,365	-		PGA1_c13720	0.80	+1.8
1,417,365	-		PGA1_c13720	0.80	+2.0
1,417,393	+		PGA1_c13720	0.83	+1.8
1,417,405	+		PGA1_c13720	0.84	+1.4
1,417,413	-		PGA1_c13720	0.85	+1.0
1,417,413	-		PGA1_c13720	0.85	-3.3
1,417,413	-		PGA1_c13720	0.85	-2.5
1,417,447	-		PGA1_c13720	0.89	+0.4
1,417,461	-				-0.9
1,417,520	+				-1.0
1,417,520	+				+1.6
1,417,523	-				-0.8
1,417,526	-				+3.0
1,417,528	-				-1.6
1,417,576	+				+1.0
1,417,619	-				+0.4
1,417,655	-		PGA1_c13730	0.11	-0.9
1,417,666	+		PGA1_c13730	0.12	+0.3
1,417,666	+		PGA1_c13730	0.12	+1.0
1,417,666	+		PGA1_c13730	0.12	+0.7