Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13670

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,409,638	+		PGA1_c13650	0.35	+0.9
1,409,655	-		PGA1_c13650	0.37	-0.2
1,409,689	+		PGA1_c13650	0.42	-3.0
1,409,740	-		PGA1_c13650	0.50	-0.2
1,409,749	+		PGA1_c13650	0.51	-2.5
1,409,749	+		PGA1_c13650	0.51	-1.6
1,409,749	+		PGA1_c13650	0.51	-1.9
1,409,749	+		PGA1_c13650	0.51	-2.3
1,409,757	-		PGA1_c13650	0.52	-2.4
1,409,757	-		PGA1_c13650	0.52	-2.5
1,409,757	-		PGA1_c13650	0.52	-3.0
1,409,757	-		PGA1_c13650	0.52	+1.6
1,409,757	-		PGA1_c13650	0.52	+0.5
1,409,757	-		PGA1_c13650	0.52	+1.0
1,409,757	-		PGA1_c13650	0.52	-0.5
1,409,757	-		PGA1_c13650	0.52	-0.5
1,409,770	+		PGA1_c13650	0.54	+1.2
1,409,770	+		PGA1_c13650	0.54	+1.4
1,409,770	+		PGA1_c13650	0.54	+1.8
1,409,780	-		PGA1_c13650	0.56	-3.3
1,409,788	-		PGA1_c13650	0.57	+3.9
1,409,845	+		PGA1_c13650	0.65	-0.1
1,409,869	-		PGA1_c13650	0.69	-2.3
1,409,872	-		PGA1_c13650	0.69	+0.3
1,409,894	-		PGA1_c13650	0.73	+1.5
1,409,902	+		PGA1_c13650	0.74	+1.1
1,409,910	-		PGA1_c13650	0.75	-1.4
1,409,910	-		PGA1_c13650	0.75	-2.9
1,409,912	-		PGA1_c13650	0.75	+1.3
1,409,919	-		PGA1_c13650	0.76	+0.3
1,409,968	+		PGA1_c13650	0.83	+3.2
1,409,976	-		PGA1_c13650	0.85	+1.4
1,409,986	+		PGA1_c13650	0.86	-0.3
1,410,007	+		PGA1_c13650	0.89	+0.6
1,410,032	+				+1.0
1,410,032	+				+1.0
1,410,032	+				-1.6
1,410,042	+				+1.1
1,410,050	-				+1.1
1,410,074	+				-0.5
1,410,074	+				+0.3
1,410,079	+				+0.7
1,410,079	+				+1.2
1,410,079	+				-1.1
1,410,082	-				-1.4
1,410,082	-				+1.2
1,410,087	-				+2.1
1,410,087	-				+0.4
1,410,087	-				+1.7
1,410,087	-				-1.1
1,410,088	+				-2.4
1,410,089	+				+0.1
1,410,096	-				+0.9
1,410,096	-				+0.8
1,410,134	+				-1.2
1,410,142	-		PGA1_c13660	0.11	+1.0
1,410,153	-		PGA1_c13660	0.13	+0.8
1,410,155	+		PGA1_c13660	0.13	+0.9
1,410,155	+		PGA1_c13660	0.13	-0.4
1,410,155	+		PGA1_c13660	0.13	+1.2
1,410,155	+		PGA1_c13660	0.13	+1.7
1,410,155	+		PGA1_c13660	0.13	-1.0
1,410,155	+		PGA1_c13660	0.13	+1.5
1,410,163	-		PGA1_c13660	0.15	+1.7
1,410,163	-		PGA1_c13660	0.15	-2.2
1,410,163	-		PGA1_c13660	0.15	+0.2
1,410,163	-		PGA1_c13660	0.15	-3.3
1,410,163	-		PGA1_c13660	0.15	-1.6
1,410,163	-		PGA1_c13660	0.15	+0.7
1,410,163	-		PGA1_c13660	0.15	+0.1
1,410,163	-		PGA1_c13660	0.15	+0.2
1,410,163	-		PGA1_c13660	0.15	+1.2
1,410,272	+		PGA1_c13660	0.35	+1.2
1,410,272	-		PGA1_c13660	0.35	-2.6
1,410,277	+		PGA1_c13660	0.36	-1.6
1,410,285	-		PGA1_c13660	0.38	+2.1
1,410,344	+		PGA1_c13660	0.49	+0.2
1,410,357	+		PGA1_c13660	0.51	-0.6
1,410,373	+		PGA1_c13660	0.54	+1.9
1,410,393	+		PGA1_c13660	0.58	-2.7
1,410,419	-		PGA1_c13660	0.63	-2.9
1,410,419	-		PGA1_c13660	0.63	+0.4
1,410,510	+		PGA1_c13660	0.80	+0.9
1,410,513	-		PGA1_c13660	0.80	+0.1
1,410,517	+		PGA1_c13660	0.81	-1.5
1,410,520	-		PGA1_c13660	0.81	+2.0
1,410,520	-		PGA1_c13660	0.81	-1.0
1,410,532	+		PGA1_c13660	0.84	+1.9
1,410,593	-				+0.3
1,410,615	+				-1.7
1,410,616	-				+1.7
1,410,649	+				+0.3
1,410,669	+				-0.2
1,410,677	-				-3.2
1,410,707	-				+2.4
1,410,717	+				+0.5
1,410,748	+				-0.7
1,410,767	-		PGA1_c13670	0.10	+0.3
1,410,777	+		PGA1_c13670	0.11	+0.5
1,410,785	-		PGA1_c13670	0.12	+2.4
1,410,947	+		PGA1_c13670	0.23	-1.7
1,410,987	+		PGA1_c13670	0.26	-0.2
1,410,992	+		PGA1_c13670	0.27	+0.6
1,410,992	+		PGA1_c13670	0.27	-2.7
1,410,995	-		PGA1_c13670	0.27	-0.7
1,410,995	-		PGA1_c13670	0.27	-1.4
1,411,000	-		PGA1_c13670	0.27	-0.5
1,411,000	-		PGA1_c13670	0.27	+1.5
1,411,000	-		PGA1_c13670	0.27	-2.7
1,411,000	-		PGA1_c13670	0.27	+1.0
1,411,034	-		PGA1_c13670	0.30	+0.6
1,411,076	-		PGA1_c13670	0.33	+1.6
1,411,077	-		PGA1_c13670	0.33	+0.8
1,411,084	+		PGA1_c13670	0.33	+0.3
1,411,084	+		PGA1_c13670	0.33	+1.2
1,411,108	+		PGA1_c13670	0.35	-3.6
1,411,120	-		PGA1_c13670	0.36	+1.4
1,411,135	-		PGA1_c13670	0.37	-3.0
1,411,135	-		PGA1_c13670	0.37	+0.5
1,411,186	+		PGA1_c13670	0.41	-3.9
1,411,188	+		PGA1_c13670	0.41	-1.7
1,411,265	-		PGA1_c13670	0.47	+2.6
1,411,294	-		PGA1_c13670	0.49	+2.4
1,411,294	-		PGA1_c13670	0.49	+2.9
1,411,302	+		PGA1_c13670	0.49	+2.4
1,411,331	+		PGA1_c13670	0.51	-3.1
1,411,331	+		PGA1_c13670	0.51	+0.3
1,411,342	+		PGA1_c13670	0.52	+1.5
1,411,411	-		PGA1_c13670	0.57	+4.4
1,411,413	+		PGA1_c13670	0.57	-2.0
1,411,413	+		PGA1_c13670	0.57	-2.0
1,411,421	-		PGA1_c13670	0.58	+0.2
1,411,421	-		PGA1_c13670	0.58	+1.4
1,411,421	-		PGA1_c13670	0.58	+1.0
1,411,465	+		PGA1_c13670	0.61	-1.7
1,411,480	+		PGA1_c13670	0.62	+0.0
1,411,599	-		PGA1_c13670	0.71	-0.7
1,411,676	+		PGA1_c13670	0.76	+1.5
1,411,822	-		PGA1_c13670	0.87	-2.0
1,411,862	+		PGA1_c13670	0.90	+0.6
1,411,865	-				+2.7
1,411,895	-				+0.9
1,411,993	-				-3.0
1,411,993	-				+0.6
1,412,061	-				-0.4
1,412,061	-				-3.7
1,412,069	-				+0.1
1,412,122	+		PGA1_c13680	0.14	-0.9
1,412,155	-		PGA1_c13680	0.17	+1.1
1,412,246	+		PGA1_c13680	0.27	-1.4
1,412,265	+		PGA1_c13680	0.29	+0.0
1,412,267	+		PGA1_c13680	0.29	+1.6
1,412,267	+		PGA1_c13680	0.29	+1.9
1,412,297	-		PGA1_c13680	0.32	-0.1
1,412,420	-		PGA1_c13680	0.45	+1.9
1,412,440	+		PGA1_c13680	0.47	+1.5
1,412,445	-		PGA1_c13680	0.48	+1.5
1,412,496	+		PGA1_c13680	0.53	+0.1
1,412,557	-		PGA1_c13680	0.60	+1.4
1,412,597	+		PGA1_c13680	0.64	-0.3
1,412,629	-		PGA1_c13680	0.67	+1.4
1,412,665	+		PGA1_c13680	0.71	+0.2
1,412,665	+		PGA1_c13680	0.71	-0.2
1,412,665	+		PGA1_c13680	0.71	-2.6
1,412,665	+		PGA1_c13680	0.71	-1.2
1,412,665	+		PGA1_c13680	0.71	-1.0
1,412,673	-		PGA1_c13680	0.72	-0.1
1,412,712	+		PGA1_c13680	0.76	-0.3
1,412,712	+		PGA1_c13680	0.76	-1.0
1,412,714	-		PGA1_c13680	0.76	-0.4
1,412,720	-		PGA1_c13680	0.77	+3.6
1,412,784	+		PGA1_c13680	0.83	+1.8
1,412,813	-		PGA1_c13680	0.87	+1.1
1,412,844	+		PGA1_c13680	0.90	+0.8
1,412,861	+				+0.6
1,412,866	+				+1.2
1,412,866	+				-2.3
1,412,874	-				-1.2
1,412,874	-				+1.4
1,412,876	+				-0.4
1,412,876	+				+1.3
1,412,876	+				+2.1
1,412,876	+				+1.9
1,412,876	+				+2.6
1,412,876	+				+0.5
1,412,876	+				-0.6
1,412,884	-				+1.3
1,412,884	-				+0.3
1,412,884	-				-2.3
1,412,884	-				-1.2
1,412,884	-				+0.8
1,412,884	-				-1.6
1,412,884	-				-2.2
1,412,884	-				-3.0
1,412,884	-				-1.0
1,412,884	-				+0.3
1,412,884	-				+0.9
1,412,884	-				-0.9
1,412,884	-				+1.6
1,412,884	-				+0.8
1,412,966	+				-0.7
1,412,980	-				-2.2
1,412,980	-				-0.2