Strain Fitness in Shewanella amazonensis SB2B around Sama_3437

Experiment: L-Threonine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (N)
4,067,679	+				+0.1
4,067,680	-				+1.6
4,067,715	-				-2.1
4,067,772	+		Sama_3436	0.15	-0.2
4,067,772	+		Sama_3436	0.15	+0.3
4,067,772	+		Sama_3436	0.15	-1.3
4,067,772	+		Sama_3436	0.15	+2.3
4,067,773	-		Sama_3436	0.15	-1.0
4,067,773	-		Sama_3436	0.15	-0.6
4,067,773	-		Sama_3436	0.15	-1.1
4,067,773	-		Sama_3436	0.15	-0.1
4,067,773	-		Sama_3436	0.15	+0.4
4,067,773	-		Sama_3436	0.15	-0.1
4,067,852	+		Sama_3436	0.22	-0.6
4,067,882	+		Sama_3436	0.25	-0.1
4,067,883	-		Sama_3436	0.25	-1.5
4,067,883	-		Sama_3436	0.25	+0.7
4,067,911	+		Sama_3436	0.28	-0.6
4,067,911	+		Sama_3436	0.28	-0.7
4,067,912	-		Sama_3436	0.28	-0.6
4,067,912	-		Sama_3436	0.28	-0.1
4,067,912	-		Sama_3436	0.28	+1.0
4,068,057	-		Sama_3436	0.42	-1.1
4,068,111	+		Sama_3436	0.47	-0.1
4,068,112	-		Sama_3436	0.47	+1.1
4,068,112	-		Sama_3436	0.47	-1.6
4,068,112	-		Sama_3436	0.47	-0.8
4,068,112	-		Sama_3436	0.47	+0.8
4,068,112	-		Sama_3436	0.47	+0.0
4,068,250	+		Sama_3436	0.61	-1.5
4,068,278	+		Sama_3436	0.63	+4.4
4,068,278	+		Sama_3436	0.63	-2.9
4,068,279	-		Sama_3436	0.63	+0.0
4,068,279	-		Sama_3436	0.63	+0.1
4,068,315	+		Sama_3436	0.67	+0.9
4,068,315	+		Sama_3436	0.67	+1.4
4,068,358	+		Sama_3436	0.71	-0.1
4,068,359	-		Sama_3436	0.71	-0.4
4,068,406	+		Sama_3436	0.75	+1.9
4,068,406	+		Sama_3436	0.75	-0.5
4,068,406	+		Sama_3436	0.75	-0.3
4,068,407	-		Sama_3436	0.76	-0.3
4,068,407	-		Sama_3436	0.76	-0.6
4,068,408	+		Sama_3436	0.76	-0.3
4,068,409	-		Sama_3436	0.76	+0.2
4,068,409	-		Sama_3436	0.76	-0.4
4,068,409	-		Sama_3436	0.76	+2.1
4,068,409	-		Sama_3436	0.76	-0.8
4,068,409	-		Sama_3436	0.76	-1.2
4,068,436	+		Sama_3436	0.78	-2.6
4,068,436	+		Sama_3436	0.78	-0.1
4,068,437	-		Sama_3436	0.78	-0.5
4,068,440	+		Sama_3436	0.79	-0.6
4,068,440	+		Sama_3436	0.79	-0.5
4,068,440	+		Sama_3436	0.79	+1.6
4,068,440	+		Sama_3436	0.79	-2.7
4,068,440	+		Sama_3436	0.79	-1.0
4,068,440	+		Sama_3436	0.79	+1.4
4,068,440	+		Sama_3436	0.79	-0.0
4,068,440	+		Sama_3436	0.79	+0.1
4,068,440	+		Sama_3436	0.79	-1.0
4,068,441	-		Sama_3436	0.79	-1.6
4,068,441	-		Sama_3436	0.79	+1.1
4,068,441	-		Sama_3436	0.79	-0.1
4,068,441	-		Sama_3436	0.79	-0.9
4,068,441	-		Sama_3436	0.79	+0.6
4,068,441	-		Sama_3436	0.79	-0.2
4,068,441	-		Sama_3436	0.79	-0.3
4,068,441	-		Sama_3436	0.79	-0.7
4,068,441	-		Sama_3436	0.79	+0.5
4,068,483	+		Sama_3436	0.83	+0.1
4,068,484	-		Sama_3436	0.83	-0.8
4,068,541	+		Sama_3436	0.88	+0.1
4,068,541	+		Sama_3436	0.88	-0.8
4,068,541	+		Sama_3436	0.88	+0.9
4,068,542	-		Sama_3436	0.89	+1.5
4,068,542	-		Sama_3436	0.89	+1.6
4,068,542	-		Sama_3436	0.89	-0.6
4,068,549	+		Sama_3436	0.89	+0.4
4,068,549	+		Sama_3436	0.89	+0.9
4,068,550	-		Sama_3436	0.89	+0.0
4,068,571	+				+0.5
4,068,572	-				-0.1
4,068,572	-				-0.7
4,068,573	+				-0.4
4,068,573	+				+0.3
4,068,573	+				-2.0
4,068,573	+				-1.7
4,068,573	+				-0.4
4,068,573	+				+0.4
4,068,573	+				+0.1
4,068,574	-				+3.0
4,068,574	-				+1.2
4,068,574	-				+0.8
4,068,574	-				+0.7
4,068,574	-				-1.9
4,068,583	+				-0.3
4,068,584	-				-0.1
4,068,724	-		Sama_3437	0.11	+0.0
4,068,749	+		Sama_3437	0.15	-0.4
4,068,749	+		Sama_3437	0.15	-0.5
4,068,749	+		Sama_3437	0.15	-1.3
4,068,749	+		Sama_3437	0.15	+0.0
4,068,749	+		Sama_3437	0.15	-1.4
4,068,749	+		Sama_3437	0.15	-0.4
4,068,749	+		Sama_3437	0.15	-1.3
4,068,750	-		Sama_3437	0.15	+2.4
4,068,750	-		Sama_3437	0.15	-0.6
4,068,750	-		Sama_3437	0.15	+1.5
4,068,750	-		Sama_3437	0.15	-0.9
4,068,750	-		Sama_3437	0.15	+0.7
4,068,750	-		Sama_3437	0.15	-0.4
4,068,750	-		Sama_3437	0.15	-2.1
4,068,750	-		Sama_3437	0.15	-1.5
4,068,750	-		Sama_3437	0.15	+0.3
4,068,750	-		Sama_3437	0.15	-0.3
4,068,821	+		Sama_3437	0.27	-0.2
4,068,821	+		Sama_3437	0.27	+1.1
4,068,821	+		Sama_3437	0.27	+0.1
4,068,821	+		Sama_3437	0.27	+1.1
4,068,822	-		Sama_3437	0.27	+0.4
4,068,822	-		Sama_3437	0.27	-0.0
4,068,822	-		Sama_3437	0.27	+0.4
4,068,822	-		Sama_3437	0.27	+0.8
4,068,822	-		Sama_3437	0.27	-0.8
4,068,822	-		Sama_3437	0.27	+0.4
4,068,822	-		Sama_3437	0.27	-0.6
4,068,849	-		Sama_3437	0.31	-0.8
4,068,849	-		Sama_3437	0.31	+0.7
4,068,849	-		Sama_3437	0.31	-1.2
4,068,849	-		Sama_3437	0.31	+0.8
4,068,871	-		Sama_3437	0.35	-0.4
4,068,880	-		Sama_3437	0.36	-0.1
4,068,919	-		Sama_3437	0.43	-0.1
4,068,919	-		Sama_3437	0.43	-1.1
4,068,919	-		Sama_3437	0.43	+1.1
4,068,919	-		Sama_3437	0.43	+0.1
4,068,919	-		Sama_3437	0.43	-1.3
4,068,993	-		Sama_3437	0.55	-1.1
4,069,009	+		Sama_3437	0.57	-0.6
4,069,009	+		Sama_3437	0.57	+1.1
4,069,010	-		Sama_3437	0.58	+2.0
4,069,010	-		Sama_3437	0.58	+0.6
4,069,020	+		Sama_3437	0.59	+0.4
4,069,063	+		Sama_3437	0.66	-1.4
4,069,220	+				-1.3
4,069,220	+				-0.2
4,069,221	-				+0.9
4,069,221	-				-1.1
4,069,221	-				+1.5
4,069,221	-				+0.7
4,069,221	-				-0.1
4,069,284	+				-1.4
4,069,284	+				-0.3
4,069,285	-				+1.3
4,069,378	+		Sama_3438	0.23	-0.7
4,069,378	+		Sama_3438	0.23	+0.4
4,069,379	-		Sama_3438	0.23	+1.0
4,069,379	-		Sama_3438	0.23	-0.7
4,069,379	-		Sama_3438	0.23	-0.7
4,069,379	-		Sama_3438	0.23	-0.0
4,069,379	-		Sama_3438	0.23	-1.3
4,069,515	+		Sama_3438	0.53	-0.6
4,069,515	+		Sama_3438	0.53	+0.6
4,069,516	-		Sama_3438	0.53	-0.6
4,069,516	-		Sama_3438	0.53	-0.5
4,069,536	+		Sama_3438	0.58	+0.4
4,069,536	+		Sama_3438	0.58	-1.5
4,069,536	+		Sama_3438	0.58	+0.4
4,069,536	+		Sama_3438	0.58	-0.3
4,069,574	+		Sama_3438	0.66	+0.2
4,069,574	+		Sama_3438	0.66	+1.8
4,069,575	-		Sama_3438	0.66	+0.0
4,069,575	-		Sama_3438	0.66	+0.9
4,069,575	-		Sama_3438	0.66	-0.3
4,069,575	-		Sama_3438	0.66	-1.5
4,069,669	+		Sama_3438	0.87	-0.6
4,069,669	+		Sama_3438	0.87	-1.9
4,069,669	+		Sama_3438	0.87	+0.1
4,069,669	+		Sama_3438	0.87	+0.5
4,069,669	+		Sama_3438	0.87	+0.3
4,069,669	+		Sama_3438	0.87	-0.7
4,069,669	+		Sama_3438	0.87	+0.9
4,069,669	+		Sama_3438	0.87	-0.6
4,069,669	+		Sama_3438	0.87	-0.8
4,069,669	+		Sama_3438	0.87	-1.8
4,069,669	+		Sama_3438	0.87	-0.7
4,069,669	+		Sama_3438	0.87	+1.5
4,069,669	+		Sama_3438	0.87	-2.0
4,069,670	-		Sama_3438	0.87	-0.0
4,069,670	-		Sama_3438	0.87	+0.2
4,069,670	-		Sama_3438	0.87	+0.3
4,069,670	-		Sama_3438	0.87	-0.5
4,069,677	+		Sama_3438	0.89	+0.1
4,069,678	-		Sama_3438	0.89	-0.5
4,069,679	+		Sama_3438	0.89	-1.1
4,069,679	+		Sama_3438	0.89	+0.1
4,069,679	+		Sama_3438	0.89	-3.2
4,069,680	-		Sama_3438	0.89	+0.3
4,069,680	-		Sama_3438	0.89	-0.3
4,069,680	-		Sama_3438	0.89	-0.3
4,069,680	-		Sama_3438	0.89	-0.3
4,069,699	+				-1.5
4,069,699	+				+0.4
4,069,699	+				-0.3
4,069,700	-				-0.6
4,069,737	-				-0.1
4,069,737	-				-0.1
4,069,737	-				+0.6
4,069,917	+				-2.1
4,069,917	+				-0.7
4,069,917	+				-1.1
4,069,918	-				+0.7
4,069,918	-				+0.7
4,069,918	-				-1.9
4,069,918	-				+0.3
4,069,954	+		Sama_3439	0.10	-0.6
4,069,955	-		Sama_3439	0.10	+0.2
4,069,955	-		Sama_3439	0.10	+0.2
4,069,955	-		Sama_3439	0.10	-2.3
4,069,955	-		Sama_3439	0.10	+1.2
4,069,964	+		Sama_3439	0.11	-0.1
4,069,964	+		Sama_3439	0.11	-0.3
4,069,964	+		Sama_3439	0.11	-0.5
4,069,964	+		Sama_3439	0.11	+1.1
4,069,965	-		Sama_3439	0.11	-0.0
4,070,017	+		Sama_3439	0.13	-0.4
4,070,017	+		Sama_3439	0.13	+0.9
4,070,018	-		Sama_3439	0.13	-1.7
4,070,018	-		Sama_3439	0.13	-0.5
4,070,018	-		Sama_3439	0.13	+0.6
4,070,075	+		Sama_3439	0.16	+1.1
4,070,093	+		Sama_3439	0.16	-0.9
4,070,093	+		Sama_3439	0.16	+0.9
4,070,167	+		Sama_3439	0.20	+0.0
4,070,168	-		Sama_3439	0.20	-0.6
4,070,178	+		Sama_3439	0.20	+0.9
4,070,178	+		Sama_3439	0.20	-1.6
4,070,178	+		Sama_3439	0.20	-1.4
4,070,178	+		Sama_3439	0.20	+0.3
4,070,179	-		Sama_3439	0.20	-0.6
4,070,179	-		Sama_3439	0.20	+0.6
4,070,179	-		Sama_3439	0.20	+0.0
4,070,179	-		Sama_3439	0.20	+1.3
4,070,179	-		Sama_3439	0.20	-1.1
4,070,179	-		Sama_3439	0.20	+0.7
4,070,179	-		Sama_3439	0.20	-0.9
4,070,179	-		Sama_3439	0.20	+0.4
4,070,197	+		Sama_3439	0.21	-0.2
4,070,197	+		Sama_3439	0.21	-1.0
4,070,197	+		Sama_3439	0.21	-0.1
4,070,198	-		Sama_3439	0.21	-1.4
4,070,198	-		Sama_3439	0.21	+1.8
4,070,198	-		Sama_3439	0.21	-0.7
4,070,198	-		Sama_3439	0.21	-1.0
4,070,224	+		Sama_3439	0.22	-1.3
4,070,224	+		Sama_3439	0.22	+0.3
4,070,225	-		Sama_3439	0.22	+0.9
4,070,225	-		Sama_3439	0.22	-1.0
4,070,225	-		Sama_3439	0.22	-0.5
4,070,225	-		Sama_3439	0.22	-0.2
4,070,225	-		Sama_3439	0.22	+1.0
4,070,225	-		Sama_3439	0.22	-0.1
4,070,225	-		Sama_3439	0.22	-0.0
4,070,225	-		Sama_3439	0.22	+0.7
4,070,225	-		Sama_3439	0.22	+0.7
4,070,229	+		Sama_3439	0.22	-0.3
4,070,230	-		Sama_3439	0.22	+0.9
4,070,230	-		Sama_3439	0.22	+0.2