Strain Fitness in Shewanella amazonensis SB2B around Sama_3182

Experiment: L-Threonine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (N)
3,772,181	-		Sama_3181	0.15	-2.1
3,772,181	-		Sama_3181	0.15	-1.1
3,772,214	+		Sama_3181	0.17	-1.2
3,772,214	+		Sama_3181	0.17	-1.1
3,772,214	+		Sama_3181	0.17	-1.1
3,772,215	-		Sama_3181	0.18	+0.0
3,772,215	-		Sama_3181	0.18	+0.1
3,772,217	+		Sama_3181	0.18	+0.1
3,772,232	+		Sama_3181	0.19	+0.1
3,772,233	-		Sama_3181	0.19	+0.8
3,772,233	-		Sama_3181	0.19	+0.4
3,772,287	+		Sama_3181	0.24	+1.1
3,772,287	+		Sama_3181	0.24	+1.0
3,772,288	-		Sama_3181	0.24	-0.1
3,772,289	+		Sama_3181	0.24	-1.4
3,772,289	+		Sama_3181	0.24	+1.2
3,772,289	+		Sama_3181	0.24	+0.1
3,772,289	+		Sama_3181	0.24	-1.2
3,772,289	+		Sama_3181	0.24	-0.3
3,772,289	+		Sama_3181	0.24	-0.9
3,772,290	-		Sama_3181	0.24	-1.5
3,772,290	-		Sama_3181	0.24	-0.6
3,772,290	-		Sama_3181	0.24	-2.0
3,772,290	-		Sama_3181	0.24	-0.5
3,772,290	-		Sama_3181	0.24	-1.7
3,772,290	-		Sama_3181	0.24	+0.9
3,772,290	-		Sama_3181	0.24	-0.2
3,772,363	-		Sama_3181	0.31	-0.7
3,772,404	+		Sama_3181	0.34	+0.0
3,772,404	+		Sama_3181	0.34	-1.1
3,772,404	+		Sama_3181	0.34	+0.3
3,772,404	+		Sama_3181	0.34	+0.0
3,772,404	+		Sama_3181	0.34	-0.3
3,772,404	+		Sama_3181	0.34	+0.7
3,772,405	-		Sama_3181	0.34	+1.5
3,772,405	-		Sama_3181	0.34	-0.5
3,772,405	-		Sama_3181	0.34	-1.5
3,772,405	-		Sama_3181	0.34	-0.8
3,772,405	-		Sama_3181	0.34	-0.2
3,772,405	-		Sama_3181	0.34	-0.1
3,772,483	+		Sama_3181	0.41	-0.4
3,772,483	+		Sama_3181	0.41	+1.1
3,772,515	+		Sama_3181	0.44	-0.3
3,772,529	-		Sama_3181	0.46	-0.1
3,772,561	-		Sama_3181	0.48	+0.9
3,772,631	+		Sama_3181	0.55	-0.5
3,772,632	-		Sama_3181	0.55	-0.2
3,772,632	-		Sama_3181	0.55	-0.3
3,772,857	+		Sama_3181	0.75	-1.8
3,772,858	-		Sama_3181	0.75	-1.4
3,772,858	-		Sama_3181	0.75	+0.1
3,772,858	-		Sama_3181	0.75	-0.4
3,772,868	+		Sama_3181	0.76	-1.5
3,772,869	-		Sama_3181	0.76	-0.6
3,772,938	+		Sama_3181	0.82	+0.4
3,772,939	-		Sama_3181	0.82	-0.3
3,773,011	+		Sama_3181	0.89	-1.9
3,773,012	-		Sama_3181	0.89	+0.6
3,773,012	-		Sama_3181	0.89	+1.1
3,773,012	-		Sama_3181	0.89	+0.5
3,773,027	+				-0.9
3,773,028	-				+0.3
3,773,148	+				-0.6
3,773,148	+				+1.6
3,773,149	-				-1.1
3,773,157	-				+0.7
3,773,157	-				+0.0
3,773,158	+				+0.5
3,773,158	+				+1.4
3,773,158	+				+1.2
3,773,159	-				+0.6
3,773,159	-				-0.5
3,773,159	-				-0.7
3,773,159	-				-0.7
3,773,159	-				+0.1
3,773,159	-				-0.9
3,773,185	+				-0.3
3,773,722	-		Sama_3182	0.31	-0.5
3,773,821	-		Sama_3182	0.36	+1.2
3,773,821	-		Sama_3182	0.36	+0.1
3,773,832	+		Sama_3182	0.37	+1.1
3,773,832	+		Sama_3182	0.37	-1.3
3,773,833	-		Sama_3182	0.37	+0.1
3,773,833	-		Sama_3182	0.37	-0.2
3,773,833	-		Sama_3182	0.37	+0.4
3,773,833	-		Sama_3182	0.37	-0.1
3,773,866	+		Sama_3182	0.39	-1.7
3,773,867	-		Sama_3182	0.39	-0.2
3,773,867	-		Sama_3182	0.39	+0.5
3,773,867	-		Sama_3182	0.39	-0.7
3,773,881	-		Sama_3182	0.40	+0.4
3,773,923	+		Sama_3182	0.42	+0.3
3,773,923	+		Sama_3182	0.42	-0.2
3,773,923	+		Sama_3182	0.42	-0.1
3,773,924	-		Sama_3182	0.42	-0.7
3,773,924	-		Sama_3182	0.42	+1.7
3,773,924	-		Sama_3182	0.42	+0.5
3,773,924	-		Sama_3182	0.42	-1.5
3,773,970	+		Sama_3182	0.45	-0.1
3,773,970	+		Sama_3182	0.45	+0.1
3,773,970	+		Sama_3182	0.45	-0.8
3,773,970	+		Sama_3182	0.45	+3.5
3,773,970	+		Sama_3182	0.45	-0.2
3,773,971	-		Sama_3182	0.45	+1.0
3,773,971	-		Sama_3182	0.45	-0.7
3,773,971	-		Sama_3182	0.45	+0.7
3,773,971	-		Sama_3182	0.45	-0.6
3,773,971	-		Sama_3182	0.45	+1.5
3,773,973	-		Sama_3182	0.45	-1.1
3,773,973	-		Sama_3182	0.45	-0.2
3,773,973	-		Sama_3182	0.45	+0.7
3,773,990	+		Sama_3182	0.46	+0.4
3,773,990	+		Sama_3182	0.46	-2.2
3,773,990	+		Sama_3182	0.46	+1.5
3,773,991	-		Sama_3182	0.46	-0.3
3,773,991	-		Sama_3182	0.46	-2.0
3,773,991	-		Sama_3182	0.46	+0.0
3,773,991	-		Sama_3182	0.46	-0.3
3,773,991	-		Sama_3182	0.46	+0.9
3,773,991	-		Sama_3182	0.46	-2.7
3,774,012	+		Sama_3182	0.47	+0.7
3,774,012	+		Sama_3182	0.47	-0.3
3,774,012	+		Sama_3182	0.47	+1.3
3,774,012	+		Sama_3182	0.47	-0.1
3,774,012	+		Sama_3182	0.47	-1.0
3,774,012	+		Sama_3182	0.47	+0.1
3,774,012	+		Sama_3182	0.47	-1.3
3,774,013	-		Sama_3182	0.47	-0.9
3,774,013	-		Sama_3182	0.47	-0.7
3,774,013	-		Sama_3182	0.47	+1.0
3,774,013	-		Sama_3182	0.47	-0.2
3,774,013	-		Sama_3182	0.47	-1.0
3,774,013	-		Sama_3182	0.47	-1.4
3,774,013	-		Sama_3182	0.47	+1.3
3,774,013	-		Sama_3182	0.47	-1.7
3,774,013	-		Sama_3182	0.47	+0.8
3,774,032	+		Sama_3182	0.48	-0.6
3,774,048	+		Sama_3182	0.49	-0.1
3,774,048	+		Sama_3182	0.49	+0.1
3,774,110	+		Sama_3182	0.52	-0.5
3,774,243	+		Sama_3182	0.59	+0.1
3,774,243	+		Sama_3182	0.59	+0.7
3,774,300	-		Sama_3182	0.63	-2.0
3,774,300	-		Sama_3182	0.63	+0.1
3,774,300	-		Sama_3182	0.63	-0.2
3,774,300	-		Sama_3182	0.63	-0.3
3,774,321	+		Sama_3182	0.64	-0.2
3,774,322	-		Sama_3182	0.64	-0.3
3,774,322	-		Sama_3182	0.64	-0.7
3,774,390	+		Sama_3182	0.67	-0.1
3,774,390	+		Sama_3182	0.67	+0.9
3,774,390	+		Sama_3182	0.67	-1.3
3,774,391	-		Sama_3182	0.68	-1.1
3,774,391	-		Sama_3182	0.68	-0.0
3,774,391	-		Sama_3182	0.68	+0.5
3,774,391	-		Sama_3182	0.68	-0.5
3,774,391	-		Sama_3182	0.68	-0.9
3,774,394	-		Sama_3182	0.68	+0.5
3,774,425	+		Sama_3182	0.69	+0.5
3,774,425	+		Sama_3182	0.69	-0.5
3,774,425	+		Sama_3182	0.69	-0.2
3,774,425	+		Sama_3182	0.69	+0.0
3,774,425	+		Sama_3182	0.69	+0.1
3,774,425	+		Sama_3182	0.69	+1.5
3,774,525	-		Sama_3182	0.75	+0.0
3,774,582	+		Sama_3182	0.78	-1.0
3,774,583	-		Sama_3182	0.78	-0.9
3,774,610	+		Sama_3182	0.80	-1.2
3,774,610	+		Sama_3182	0.80	+0.1
3,774,611	-		Sama_3182	0.80	-0.6
3,774,611	-		Sama_3182	0.80	-0.2
3,774,611	-		Sama_3182	0.80	+1.0
3,774,625	+		Sama_3182	0.80	+0.5
3,774,625	+		Sama_3182	0.80	-0.5
3,774,625	+		Sama_3182	0.80	+1.3
3,774,626	-		Sama_3182	0.80	-0.3
3,774,626	-		Sama_3182	0.80	-0.8
3,774,626	-		Sama_3182	0.80	-0.1
3,774,632	+		Sama_3182	0.81	+0.7
3,774,632	+		Sama_3182	0.81	-0.5
3,774,632	+		Sama_3182	0.81	-1.2
3,774,633	-		Sama_3182	0.81	-0.5
3,774,633	-		Sama_3182	0.81	-1.2
3,774,633	-		Sama_3182	0.81	-1.0
3,774,633	-		Sama_3182	0.81	-0.3
3,774,633	-		Sama_3182	0.81	-1.1
3,774,633	-		Sama_3182	0.81	+0.2
3,774,633	-		Sama_3182	0.81	+1.3
3,774,633	-		Sama_3182	0.81	+0.2
3,774,729	+		Sama_3182	0.86	+0.2
3,774,730	-		Sama_3182	0.86	+1.1
3,774,730	-		Sama_3182	0.86	-0.7
3,774,730	-		Sama_3182	0.86	+0.6
3,774,730	-		Sama_3182	0.86	-1.4
3,774,730	-		Sama_3182	0.86	-0.0
3,774,730	-		Sama_3182	0.86	+0.3
3,774,824	+				-1.4
3,774,824	+				-0.4
3,774,824	+				-0.5
3,774,824	+				+0.1
3,774,824	+				-0.3
3,774,824	+				-2.0
3,774,825	-				-2.4
3,774,825	-				+0.3
3,774,825	-				-0.6
3,774,825	-				+1.0
3,774,880	+				+1.0
3,774,881	-				+0.7
3,774,881	-				+0.8
3,774,881	-				-0.1
3,774,958	+				-1.2
3,774,959	-				+0.6
3,774,989	+				-0.6
3,774,990	-				+1.1
3,775,002	+				-0.2
3,775,002	+				-1.0
3,775,003	-				-2.0
3,775,003	-				-0.5
3,775,003	-				+0.5
3,775,003	-				+0.2
3,775,052	-				-1.0
3,775,146	+				+0.2
3,775,147	-				-0.4
3,775,147	-				-0.2
3,775,147	-				+0.2
3,775,147	-				-0.5
3,775,147	-				-1.2
3,775,147	-				-0.5
3,775,147	-				-0.5
3,775,198	+				-1.7
3,775,198	+				-0.8
3,775,198	+				-0.5
3,775,198	+				-0.8
3,775,198	+				-0.4
3,775,198	+				+0.5
3,775,198	+				+2.4
3,775,198	+				+0.8
3,775,198	+				+1.5
3,775,198	+				+0.0
3,775,198	+				+0.1
3,775,199	-				+1.1
3,775,199	-				+1.4
3,775,199	-				-0.0
3,775,199	-				+0.4
3,775,199	-				-0.0
3,775,199	-				-0.5
3,775,199	-				+0.1
3,775,199	-				-0.2
3,775,199	-				-1.9
3,775,200	+				+0.9
3,775,200	+				-0.6
3,775,200	+				+0.4
3,775,200	+				+0.1
3,775,200	+				-2.3
3,775,200	+				+0.6
3,775,200	+				-0.1
3,775,200	+				+0.1
3,775,200	+				-0.3
3,775,200	+				-0.6
3,775,200	+				+1.5
3,775,200	+				+2.5
3,775,200	+				-0.7
3,775,201	-				+0.4
3,775,201	-				+0.2
3,775,201	-				-0.2
3,775,201	-				+0.3
3,775,201	-				-1.2
3,775,201	-				+0.0
3,775,201	-				+0.2
3,775,305	+		Sama_3183	0.27	+0.5
3,775,306	-		Sama_3183	0.28	-1.6
3,775,306	-		Sama_3183	0.28	+0.5
3,775,306	-		Sama_3183	0.28	+0.0
3,775,486	-		Sama_3183	0.59	-1.4
3,775,513	+		Sama_3183	0.64	-0.9
3,775,624	+		Sama_3183	0.83	+0.1
3,775,624	+		Sama_3183	0.83	-0.4
3,775,624	+		Sama_3183	0.83	+0.7
3,775,624	+		Sama_3183	0.83	+0.6
3,775,624	+		Sama_3183	0.83	+0.0
3,775,625	-		Sama_3183	0.83	+1.8
3,775,625	-		Sama_3183	0.83	+0.5
3,775,625	-		Sama_3183	0.83	-2.2
3,775,649	+		Sama_3183	0.87	-0.6
3,775,649	+		Sama_3183	0.87	+0.8
3,775,649	+		Sama_3183	0.87	+0.4
3,775,649	+		Sama_3183	0.87	+0.2
3,775,649	+		Sama_3183	0.87	-1.3
3,775,649	+		Sama_3183	0.87	+2.3
3,775,649	+		Sama_3183	0.87	+1.3
3,775,650	-		Sama_3183	0.87	+0.1
3,775,650	-		Sama_3183	0.87	+0.9
3,775,682	+				+0.3
3,775,769	+				-2.7
3,775,769	+				-0.5
3,775,769	+				+0.5
3,775,769	+				-1.6
3,775,769	+				+0.7
3,775,769	+				-1.1
3,775,769	+				+0.1
3,775,769	+				-0.5
3,775,770	-				+1.8
3,775,770	-				+1.2
3,775,770	-				-0.5
3,775,770	-				+1.1
3,775,770	-				+0.1
3,775,770	-				-0.3
3,775,770	-				-0.4
3,775,770	-				+2.8
3,775,826	-				-0.1
3,775,826	-				+1.6
3,775,876	-				-0.1
3,775,908	+				-0.0
3,775,908	+				-0.4
3,775,908	+				-0.1
3,775,908	+				-0.5
3,775,908	+				-1.0
3,775,908	+				+0.1
3,775,909	-				+0.0
3,775,909	-				-1.0
3,775,909	-				+0.9
3,775,909	-				-1.0
3,775,953	+				+0.0
3,775,954	-				-0.7
3,775,954	-				-0.4
3,775,971	+				-0.6