Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3741

Experiment: Fumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C)
146,293	+				-0.3
146,295	+				+0.1
146,302	+				+0.6
146,302	+				-0.6
146,303	+				+0.0
146,334	+				+0.8
146,337	+				+1.2
146,342	-				+0.0
146,351	+				+0.7
146,352	+				-0.5
146,356	-				-0.5
146,358	+				-0.2
146,358	+				+0.2
146,359	-				+0.7
146,359	-				+1.4
146,359	-				-0.2
146,359	-				-0.3
146,382	+				-0.1
146,387	+				+1.0
146,395	-				+1.0
146,403	+				-0.3
146,403	+				-0.2
146,403	+				-0.9
146,403	+				+0.9
146,403	+				+0.7
146,403	+				+0.3
146,403	+				-0.5
146,403	+				+0.3
146,403	+				-1.3
146,411	-				+0.5
146,411	-				-0.9
146,411	-				-0.6
146,411	-				+0.7
146,411	-				+0.5
146,425	-				+0.7
146,428	-				-0.2
146,439	+				-0.5
146,439	+				-0.3
146,439	+				+0.5
146,439	+				-0.9
146,439	+				-0.7
146,439	+				-0.6
146,439	-				+1.1
146,447	-				+0.3
146,447	-				-0.7
146,447	-				-0.8
146,447	-				-0.9
146,459	-				-0.2
146,463	+				+0.5
146,465	+				+0.1
146,482	+				-1.3
146,482	+				-0.6
146,482	+				+1.0
146,490	-				-0.5
146,500	+				-0.3
146,503	-				+0.1
146,505	+				+0.5
146,511	-				+0.1
146,516	+				+0.3
146,516	+				+0.0
146,539	-				+0.3
146,572	+				-0.2
146,574	+				-0.6
146,575	+				-1.3
146,579	+				+0.0
146,582	-				-0.6
146,582	-				-0.8
146,582	-				+0.4
146,586	-				+0.2
146,589	+				-0.0
146,597	+				+0.1
146,597	+				-0.1
146,597	-				-0.9
146,599	+				+1.6
146,605	-				+0.1
146,605	-				-0.1
146,607	+				-1.2
146,607	+				-1.2
146,612	+				-0.4
146,612	+				+0.5
146,612	+				-0.2
146,615	-				-0.9
146,615	-				+0.7
146,620	+				+0.4
146,620	+				+1.4
146,620	-				+1.1
146,620	-				+3.3
146,620	-				+0.1
146,620	-				-0.9
146,620	-				-0.3
146,621	+				+0.8
146,629	-				-0.8
146,629	-				+0.1
146,631	+				+0.5
146,631	+				-0.0
146,631	+				-0.9
146,631	+				+0.0
146,631	+				+0.1
146,631	+				-0.5
146,631	+				+0.4
146,631	+				+0.4
146,639	-				+0.5
146,639	-				+0.1
146,639	-				+0.4
146,639	-				-0.2
146,639	-				-0.8
146,639	-				-2.1
146,639	-				-0.4
146,639	-				+1.9
146,696	+				+0.1
146,698	+				+0.6
146,709	+				-0.1
146,709	+				+0.4
146,717	-				-1.3
146,720	+				+0.5
146,784	-				-0.3
146,805	-				+0.9
146,819	+				+0.1
146,857	+				+0.4
146,881	-				+0.1
146,904	+				+1.1
146,912	-				-0.0
146,927	+				-0.9
146,935	-				+0.5
146,935	-				+0.1
146,935	-				+0.3
146,937	+				-0.4
146,941	+				+0.3
146,941	+				-0.4
146,941	+				-0.2
146,941	+				-0.2
146,941	+				+0.6
146,945	-				-0.4
146,946	+				-1.0
146,949	-				+0.2
146,949	-				+0.0
146,949	-				+1.1
146,954	-				-0.6
146,964	-				+0.3
146,964	-				-0.6
146,975	+				+0.5
146,975	+				+0.6
146,983	-				-0.7
147,007	-				-0.2
147,050	-				+2.2
147,053	-				-0.3
147,065	+				+0.0
147,065	+				-0.0
147,067	+				-0.8
147,104	-		Dshi_3740	0.24	-0.5
147,105	-		Dshi_3740	0.24	+0.1
147,135	-		Dshi_3740	0.39	-0.2
147,139	+		Dshi_3740	0.40	-1.0
147,157	+		Dshi_3740	0.49	-1.0
147,174	+		Dshi_3740	0.57	-0.5
147,195	+		Dshi_3740	0.67	-0.3
147,204	-		Dshi_3740	0.71	-1.7
147,226	-		Dshi_3740	0.82	+1.1
147,293	-				+0.3
147,300	+				+0.3
147,303	-				-0.9
147,307	+				+0.4
147,312	+				+0.6
147,315	-				+0.2
147,315	-				+0.1
147,325	-				-0.1
147,416	+		Dshi_3741	0.14	+0.9
147,416	+		Dshi_3741	0.14	-1.3
147,439	+		Dshi_3741	0.16	-0.6
147,472	+		Dshi_3741	0.20	+0.3
147,474	+		Dshi_3741	0.20	-0.5
147,480	-		Dshi_3741	0.21	-0.3
147,488	+		Dshi_3741	0.22	+0.8
147,517	+		Dshi_3741	0.25	-1.0
147,565	-		Dshi_3741	0.30	+0.1
147,582	+		Dshi_3741	0.32	-0.8
147,590	-		Dshi_3741	0.32	-0.0
147,595	-		Dshi_3741	0.33	+1.3
147,625	+		Dshi_3741	0.36	+0.6
147,625	+		Dshi_3741	0.36	+0.1
147,625	+		Dshi_3741	0.36	-0.3
147,627	+		Dshi_3741	0.36	-1.1
147,633	-		Dshi_3741	0.37	-0.2
147,635	-		Dshi_3741	0.37	+0.9
147,635	-		Dshi_3741	0.37	-2.4
147,650	+		Dshi_3741	0.39	-0.7
147,650	+		Dshi_3741	0.39	+0.7
147,652	+		Dshi_3741	0.39	+0.7
147,657	+		Dshi_3741	0.40	+0.8
147,750	+		Dshi_3741	0.50	+0.7
147,750	+		Dshi_3741	0.50	+0.1
147,756	+		Dshi_3741	0.50	+0.2
147,778	+		Dshi_3741	0.53	-0.6
147,818	-		Dshi_3741	0.57	-1.6
147,825	+		Dshi_3741	0.58	-0.4
147,833	-		Dshi_3741	0.59	+0.6
147,928	-		Dshi_3741	0.69	+0.2
147,928	-		Dshi_3741	0.69	+0.1
147,928	-		Dshi_3741	0.69	-0.1
147,938	-		Dshi_3741	0.70	+0.2
147,958	-		Dshi_3741	0.72	+0.3
147,958	-		Dshi_3741	0.72	-0.2
147,967	+		Dshi_3741	0.73	-0.3
147,975	-		Dshi_3741	0.74	-2.6
148,035	-		Dshi_3741	0.80	+0.4
148,048	+		Dshi_3741	0.82	-0.3
148,056	-		Dshi_3741	0.82	-0.3
148,056	-		Dshi_3741	0.82	-0.4
148,075	-		Dshi_3741	0.84	-0.1
148,093	+		Dshi_3741	0.86	-1.4
148,093	+		Dshi_3741	0.86	-0.4
148,229	-				-0.4
148,238	-				+0.1
148,255	-				-0.0
148,348	-		Dshi_3742	0.19	-0.4
148,348	-		Dshi_3742	0.19	-0.9
148,364	+		Dshi_3742	0.22	-0.9
148,369	+		Dshi_3742	0.23	+0.5
148,440	-		Dshi_3742	0.38	-0.8
148,484	-		Dshi_3742	0.48	-0.1
148,497	-		Dshi_3742	0.50	-0.4
148,518	+		Dshi_3742	0.55	-0.3
148,519	+		Dshi_3742	0.55	+0.2
148,522	-		Dshi_3742	0.56	+0.2
148,532	-		Dshi_3742	0.58	+0.0
148,540	+		Dshi_3742	0.59	+0.5
148,550	+		Dshi_3742	0.62	+0.0
148,550	+		Dshi_3742	0.62	-0.4
148,555	+		Dshi_3742	0.63	+0.3
148,558	-		Dshi_3742	0.63	+0.7
148,558	-		Dshi_3742	0.63	+1.7
148,621	-		Dshi_3742	0.77	-0.7
148,646	-		Dshi_3742	0.82	-0.5
148,696	+				-0.7
148,718	-				+0.7
148,733	+				+0.3
148,760	-				+1.0
148,786	-				-0.2
148,786	-				-1.3
148,786	-				-0.6
148,799	-				-1.7
148,856	-				-0.1
148,856	-				-0.4
148,866	-				-0.4
148,885	-				-0.9
148,886	-				-0.3
148,886	-				+0.6
148,918	+				-1.1
148,932	+				+0.6
149,063	+				+0.6
149,063	+				-0.2
149,063	+				+0.3
149,063	+				-0.9
149,063	+				-0.4
149,063	+				-0.1
149,063	+				-0.4
149,063	+				+0.3
149,063	+				-0.0
149,063	+				-0.7
149,063	+				+0.7
149,063	+				-1.4
149,063	+				-0.9
149,063	+				-1.2
149,063	+				+0.3
149,063	+				+0.0
149,063	+				-0.5
149,063	+				+0.3
149,063	+				-0.1
149,063	+				+0.1
149,063	+				+0.0
149,063	+				+0.0
149,063	+				-0.7
149,063	+				-0.0
149,063	+				-0.2
149,063	+				-0.5
149,063	+				-0.6
149,063	+				-0.4
149,063	+				-0.2
149,071	-				+0.1
149,071	-				-0.4
149,071	-				+1.5
149,071	-				-1.4
149,071	-				-0.4
149,071	-				-0.0
149,071	-				-0.8
149,071	-				+0.7
149,071	-				-0.7
149,071	-				+0.7
149,071	-				+0.4
149,071	-				+0.6
149,071	-				+0.5
149,071	-				-0.7
149,071	-				-0.6
149,071	-				-0.1
149,071	-				+1.7
149,071	-				-0.9
149,071	-				-0.2
149,071	-				-0.5
149,071	-				+0.2
149,071	-				-0.4
149,071	-				+0.2
149,102	+				-1.7
149,102	-				-0.2
149,110	+				-0.0
149,118	-				-0.6
149,123	-				-0.7
149,126	-				-0.3