Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34810

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,650,724	+		PGA1_c34790	0.77	-0.8
3,650,744	+		PGA1_c34790	0.81	-0.9
3,650,744	+		PGA1_c34790	0.81	-0.4
3,650,744	+		PGA1_c34790	0.81	-0.4
3,650,777	+		PGA1_c34790	0.87	+1.8
3,650,777	+		PGA1_c34790	0.87	-0.9
3,650,798	+				-2.5
3,650,798	+				+2.1
3,650,806	-				+2.4
3,650,806	-				+1.4
3,650,806	-				+1.4
3,650,806	-				-1.0
3,650,822	+				-3.3
3,650,822	+				+0.1
3,650,852	+				+2.0
3,650,860	-				-3.1
3,650,889	-				-0.5
3,650,929	+				+1.0
3,650,936	+				-0.1
3,650,936	+				+0.3
3,650,936	+				-1.1
3,650,936	+				-2.4
3,650,936	+				-1.5
3,650,936	+				-2.6
3,650,936	+				-2.1
3,650,936	+				-0.7
3,650,937	-				-3.1
3,650,944	-				+0.3
3,650,944	-				-0.4
3,650,944	-				+0.9
3,650,944	-				-1.5
3,650,944	-				+0.4
3,650,944	-				-0.6
3,650,944	-				-0.4
3,650,944	-				+1.0
3,650,957	-				+1.7
3,650,966	-				+3.1
3,651,009	+		PGA1_c34800	0.12	+1.5
3,651,013	+		PGA1_c34800	0.13	+0.7
3,651,053	+		PGA1_c34800	0.18	-0.1
3,651,053	+		PGA1_c34800	0.18	-1.9
3,651,053	+		PGA1_c34800	0.18	+2.0
3,651,061	-		PGA1_c34800	0.19	+1.8
3,651,069	+		PGA1_c34800	0.20	+0.2
3,651,069	+		PGA1_c34800	0.20	+0.6
3,651,069	-		PGA1_c34800	0.20	-0.2
3,651,076	+		PGA1_c34800	0.21	-1.8
3,651,077	-		PGA1_c34800	0.21	+2.1
3,651,077	-		PGA1_c34800	0.21	+0.6
3,651,092	-		PGA1_c34800	0.23	+0.1
3,651,115	-		PGA1_c34800	0.26	+1.4
3,651,119	+		PGA1_c34800	0.26	-1.7
3,651,154	-		PGA1_c34800	0.30	-2.4
3,651,201	+		PGA1_c34800	0.36	-1.6
3,651,232	-		PGA1_c34800	0.40	+0.2
3,651,295	-		PGA1_c34800	0.48	-0.6
3,651,322	+		PGA1_c34800	0.51	-0.7
3,651,328	+		PGA1_c34800	0.52	+0.2
3,651,330	-		PGA1_c34800	0.52	-3.5
3,651,330	-		PGA1_c34800	0.52	+1.6
3,651,337	-		PGA1_c34800	0.53	-0.0
3,651,419	+		PGA1_c34800	0.63	+0.4
3,651,462	+		PGA1_c34800	0.68	+1.5
3,651,462	-		PGA1_c34800	0.68	-0.9
3,651,462	-		PGA1_c34800	0.68	-2.5
3,651,470	-		PGA1_c34800	0.69	-1.2
3,651,470	-		PGA1_c34800	0.69	-0.8
3,651,566	+		PGA1_c34800	0.81	-1.6
3,651,566	+		PGA1_c34800	0.81	-1.1
3,651,613	-		PGA1_c34800	0.87	+1.1
3,651,627	+		PGA1_c34800	0.89	-1.9
3,651,636	-		PGA1_c34800	0.90	+0.3
3,651,657	-				+1.1
3,651,674	+				-1.8
3,651,709	+				+1.9
3,651,712	-				+1.3
3,651,728	-				-2.2
3,651,769	-				-1.2
3,651,788	+				-2.6
3,651,788	+				-1.2
3,651,788	+				-3.2
3,651,788	+				-1.9
3,651,788	+				-0.6
3,651,795	-				-0.4
3,651,796	-				-2.8
3,651,796	-				-1.8
3,651,796	-				-0.4
3,651,796	-				+0.1
3,651,796	-				+0.6
3,651,796	-				+1.4
3,651,796	-				-0.1
3,651,796	-				-0.6
3,651,796	-				+0.1
3,651,796	-				+1.4
3,651,796	-				+1.1
3,651,796	-				+1.5
3,651,796	-				+1.4
3,651,796	-				-1.3
3,651,796	-				-4.3
3,651,796	-				-0.2
3,651,848	-		PGA1_c34810	0.10	-2.4
3,651,854	-		PGA1_c34810	0.10	-0.1
3,651,854	-		PGA1_c34810	0.10	-0.8
3,651,864	+		PGA1_c34810	0.11	-0.3
3,651,885	-		PGA1_c34810	0.13	-3.3
3,651,892	+		PGA1_c34810	0.14	-2.4
3,651,892	+		PGA1_c34810	0.14	-1.2
3,651,997	+		PGA1_c34810	0.22	+0.2
3,652,047	-		PGA1_c34810	0.26	+0.7
3,652,047	-		PGA1_c34810	0.26	-0.6
3,652,047	-		PGA1_c34810	0.26	+1.6
3,652,130	+		PGA1_c34810	0.33	-0.9
3,652,138	-		PGA1_c34810	0.33	-0.6
3,652,138	-		PGA1_c34810	0.33	-0.4
3,652,188	+		PGA1_c34810	0.37	-1.5
3,652,188	+		PGA1_c34810	0.37	+1.1
3,652,196	-		PGA1_c34810	0.38	+0.2
3,652,196	-		PGA1_c34810	0.38	-1.6
3,652,260	+		PGA1_c34810	0.43	-0.3
3,652,260	+		PGA1_c34810	0.43	+0.8
3,652,271	+		PGA1_c34810	0.44	-2.1
3,652,323	+		PGA1_c34810	0.48	-2.4
3,652,331	-		PGA1_c34810	0.49	+0.9
3,652,331	-		PGA1_c34810	0.49	-1.1
3,652,362	-		PGA1_c34810	0.51	+0.8
3,652,371	+		PGA1_c34810	0.52	-1.5
3,652,433	+		PGA1_c34810	0.57	-2.6
3,652,441	-		PGA1_c34810	0.58	+1.5
3,652,443	+		PGA1_c34810	0.58	-2.3
3,652,492	+		PGA1_c34810	0.62	+0.8
3,652,492	+		PGA1_c34810	0.62	+0.1
3,652,492	+		PGA1_c34810	0.62	+0.5
3,652,500	-		PGA1_c34810	0.62	+1.1
3,652,500	-		PGA1_c34810	0.62	+0.4
3,652,556	+		PGA1_c34810	0.67	+0.4
3,652,556	+		PGA1_c34810	0.67	-2.2
3,652,564	-		PGA1_c34810	0.67	+0.3
3,652,564	-		PGA1_c34810	0.67	+0.1
3,652,564	-		PGA1_c34810	0.67	+1.0
3,652,564	-		PGA1_c34810	0.67	+0.8
3,652,564	-		PGA1_c34810	0.67	+0.7
3,652,564	-		PGA1_c34810	0.67	+0.0
3,652,564	-		PGA1_c34810	0.67	-1.5
3,652,647	+		PGA1_c34810	0.74	-0.4
3,652,804	+		PGA1_c34810	0.87	+1.1
3,652,978	+				-0.9
3,653,052	-				-2.5
3,653,054	-				-0.4
3,653,140	+				+0.4
3,653,140	+				-0.1
3,653,140	+				+0.4
3,653,140	+				-0.1
3,653,150	+				-2.7
3,653,171	-				-0.1
3,653,208	+				-0.8
3,653,208	+				-1.2
3,653,235	-				-0.5
3,653,306	-		PGA1_c34820	0.13	-2.4
3,653,308	+		PGA1_c34820	0.13	-1.1
3,653,310	+		PGA1_c34820	0.13	-2.5
3,653,310	-		PGA1_c34820	0.13	+1.0
3,653,318	-		PGA1_c34820	0.14	+0.1
3,653,350	+		PGA1_c34820	0.16	+1.2
3,653,429	+		PGA1_c34820	0.20	-2.4
3,653,472	+		PGA1_c34820	0.22	+1.8
3,653,472	+		PGA1_c34820	0.22	+0.6
3,653,480	-		PGA1_c34820	0.23	-0.9
3,653,598	-		PGA1_c34820	0.29	+0.4
3,653,744	+		PGA1_c34820	0.37	-1.2
3,653,780	+		PGA1_c34820	0.39	+1.0
3,653,780	+		PGA1_c34820	0.39	+1.5
3,653,788	-		PGA1_c34820	0.39	+0.9
3,653,788	-		PGA1_c34820	0.39	+0.5
3,653,788	-		PGA1_c34820	0.39	+0.9
3,653,800	+		PGA1_c34820	0.40	-1.2
3,653,828	+		PGA1_c34820	0.41	+1.1
3,653,866	-		PGA1_c34820	0.43	-0.1
3,653,897	+		PGA1_c34820	0.45	+1.1
3,653,897	+		PGA1_c34820	0.45	+0.1
3,653,915	-		PGA1_c34820	0.46	+1.2
3,653,916	+		PGA1_c34820	0.46	+0.3
3,653,916	+		PGA1_c34820	0.46	+1.3
3,653,916	+		PGA1_c34820	0.46	+0.1
3,653,916	+		PGA1_c34820	0.46	+0.6
3,653,916	+		PGA1_c34820	0.46	-3.0
3,653,916	+		PGA1_c34820	0.46	+0.2
3,653,921	+		PGA1_c34820	0.46	+1.2
3,653,924	-		PGA1_c34820	0.46	-3.1
3,653,924	-		PGA1_c34820	0.46	+0.4
3,653,924	-		PGA1_c34820	0.46	-2.7
3,653,953	-		PGA1_c34820	0.48	-0.1