Strain Fitness in Shewanella amazonensis SB2B around Sama_3366

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,990,612	+		Sama_3364	0.57	-0.4
3,990,612	+		Sama_3364	0.57	+0.1
3,990,612	+		Sama_3364	0.57	-1.1
3,990,613	-		Sama_3364	0.58	+0.2
3,990,613	-		Sama_3364	0.58	-0.0
3,990,613	-		Sama_3364	0.58	-0.5
3,990,613	-		Sama_3364	0.58	+1.3
3,990,613	-		Sama_3364	0.58	+1.4
3,990,613	-		Sama_3364	0.58	-0.3
3,990,614	+		Sama_3364	0.58	+0.6
3,990,614	+		Sama_3364	0.58	+0.3
3,990,615	-		Sama_3364	0.59	+0.5
3,990,631	+		Sama_3364	0.68	+0.4
3,990,644	+		Sama_3364	0.75	+0.8
3,990,645	-		Sama_3364	0.75	-1.7
3,990,645	-		Sama_3364	0.75	-0.0
3,990,659	+		Sama_3364	0.83	-0.8
3,990,659	+		Sama_3364	0.83	-0.6
3,990,659	+		Sama_3364	0.83	+0.1
3,990,660	-		Sama_3364	0.84	+2.2
3,990,660	-		Sama_3364	0.84	-1.2
3,990,680	-				+3.7
3,990,687	+				-1.0
3,990,688	-				-2.1
3,990,688	-				+1.8
3,990,691	-				+0.9
3,990,846	-		Sama_3365	0.15	-1.4
3,990,893	-		Sama_3365	0.21	-0.3
3,990,893	-		Sama_3365	0.21	-0.9
3,990,954	+		Sama_3365	0.28	-1.4
3,990,971	+		Sama_3365	0.30	-1.3
3,990,971	+		Sama_3365	0.30	-0.9
3,990,972	-		Sama_3365	0.30	-1.3
3,990,990	+		Sama_3365	0.32	+0.4
3,991,064	+		Sama_3365	0.41	+1.0
3,991,184	+		Sama_3365	0.55	-0.6
3,991,260	+		Sama_3365	0.64	-1.9
3,991,284	-		Sama_3365	0.67	+0.1
3,991,368	+		Sama_3365	0.77	-1.7
3,991,419	-		Sama_3365	0.83	+1.0
3,991,534	+				-0.9
3,991,535	-				-1.6
3,991,587	-				+1.4
3,991,655	+				-1.1
3,991,656	-				-1.1
3,991,703	+				+0.4
3,991,703	+				+0.1
3,991,703	+				-0.2
3,991,754	+				-1.3
3,991,754	+				+0.7
3,991,754	+				+1.0
3,991,755	-				+0.2
3,991,755	-				-0.4
3,991,755	-				+0.7
3,991,755	-				-0.3
3,991,755	-				-0.8
3,991,755	-				+1.2
3,991,768	+		Sama_3366	0.10	+0.1
3,991,768	+		Sama_3366	0.10	-0.3
3,991,769	-		Sama_3366	0.10	-0.2
3,991,769	-		Sama_3366	0.10	+0.1
3,991,772	-		Sama_3366	0.10	+0.6
3,991,779	+		Sama_3366	0.11	+0.0
3,991,779	+		Sama_3366	0.11	-0.2
3,991,779	+		Sama_3366	0.11	-0.3
3,991,779	+		Sama_3366	0.11	-0.9
3,991,779	+		Sama_3366	0.11	-0.4
3,991,779	+		Sama_3366	0.11	-0.1
3,991,780	-		Sama_3366	0.11	+0.2
3,991,780	-		Sama_3366	0.11	-2.5
3,991,780	-		Sama_3366	0.11	-0.5
3,991,785	+		Sama_3366	0.11	+0.1
3,991,785	+		Sama_3366	0.11	-0.7
3,991,785	+		Sama_3366	0.11	-0.7
3,991,785	+		Sama_3366	0.11	+0.8
3,991,786	-		Sama_3366	0.11	-0.5
3,991,786	-		Sama_3366	0.11	-0.6
3,991,787	+		Sama_3366	0.11	-0.0
3,991,787	+		Sama_3366	0.11	+0.2
3,991,787	+		Sama_3366	0.11	+0.7
3,991,788	-		Sama_3366	0.11	-0.3
3,991,788	-		Sama_3366	0.11	-0.8
3,991,788	-		Sama_3366	0.11	-1.1
3,991,788	-		Sama_3366	0.11	+0.6
3,991,788	-		Sama_3366	0.11	-1.0
3,991,788	-		Sama_3366	0.11	+0.0
3,991,788	-		Sama_3366	0.11	-1.6
3,991,788	-		Sama_3366	0.11	-0.3
3,991,788	-		Sama_3366	0.11	-0.3
3,991,788	-		Sama_3366	0.11	+0.1
3,991,821	+		Sama_3366	0.14	-0.2
3,991,821	+		Sama_3366	0.14	+0.2
3,991,821	+		Sama_3366	0.14	+0.1
3,991,821	+		Sama_3366	0.14	-0.9
3,991,821	+		Sama_3366	0.14	+0.3
3,991,821	+		Sama_3366	0.14	+1.7
3,991,821	+		Sama_3366	0.14	-1.0
3,991,822	-		Sama_3366	0.14	-1.0
3,991,831	+		Sama_3366	0.14	+0.2
3,991,831	+		Sama_3366	0.14	+0.6
3,991,832	-		Sama_3366	0.14	+0.1
3,991,832	-		Sama_3366	0.14	+0.6
3,991,873	+		Sama_3366	0.17	+1.4
3,991,873	+		Sama_3366	0.17	+0.5
3,991,873	+		Sama_3366	0.17	-0.9
3,991,874	-		Sama_3366	0.17	-1.3
3,991,874	-		Sama_3366	0.17	+1.6
3,991,878	+		Sama_3366	0.17	+1.3
3,991,878	+		Sama_3366	0.17	-1.2
3,991,879	-		Sama_3366	0.17	-0.2
3,991,879	-		Sama_3366	0.17	+1.2
3,991,879	-		Sama_3366	0.17	+1.1
3,991,879	-		Sama_3366	0.17	-0.7
3,991,960	+		Sama_3366	0.23	+0.5
3,991,960	+		Sama_3366	0.23	-0.0
3,991,960	+		Sama_3366	0.23	-0.3
3,991,961	-		Sama_3366	0.23	+0.5
3,991,961	-		Sama_3366	0.23	-0.9
3,991,961	-		Sama_3366	0.23	-0.7
3,991,961	-		Sama_3366	0.23	-1.0
3,991,961	-		Sama_3366	0.23	-0.6
3,991,995	+		Sama_3366	0.25	+0.5
3,991,995	+		Sama_3366	0.25	-1.6
3,991,995	+		Sama_3366	0.25	-2.5
3,992,011	-		Sama_3366	0.26	+0.5
3,992,077	+		Sama_3366	0.30	-1.2
3,992,078	-		Sama_3366	0.30	+0.1
3,992,078	-		Sama_3366	0.30	+0.9
3,992,078	-		Sama_3366	0.30	-0.2
3,992,101	+		Sama_3366	0.32	-0.6
3,992,101	+		Sama_3366	0.32	+0.4
3,992,102	-		Sama_3366	0.32	-1.1
3,992,118	+		Sama_3366	0.33	+0.8
3,992,118	+		Sama_3366	0.33	+1.4
3,992,118	+		Sama_3366	0.33	-0.9
3,992,146	-		Sama_3366	0.35	-0.1
3,992,294	+		Sama_3366	0.44	-1.3
3,992,330	-		Sama_3366	0.47	-0.7
3,992,345	+		Sama_3366	0.48	+0.1
3,992,346	-		Sama_3366	0.48	+0.8
3,992,346	-		Sama_3366	0.48	-0.4
3,992,346	-		Sama_3366	0.48	+0.5
3,992,396	+		Sama_3366	0.51	+1.1
3,992,397	-		Sama_3366	0.51	-0.2
3,992,397	-		Sama_3366	0.51	-0.4
3,992,397	-		Sama_3366	0.51	+2.3
3,992,446	-		Sama_3366	0.54	-1.1
3,992,446	-		Sama_3366	0.54	-0.7
3,992,446	-		Sama_3366	0.54	-1.6
3,992,557	+		Sama_3366	0.61	-1.4
3,992,557	+		Sama_3366	0.61	+0.4
3,992,557	+		Sama_3366	0.61	-1.3
3,992,557	+		Sama_3366	0.61	-2.4
3,992,558	-		Sama_3366	0.61	+0.5
3,992,558	-		Sama_3366	0.61	+0.4
3,992,558	-		Sama_3366	0.61	+1.4
3,992,558	-		Sama_3366	0.61	-0.9
3,992,558	-		Sama_3366	0.61	-0.9
3,992,562	+		Sama_3366	0.62	+0.5
3,992,576	+		Sama_3366	0.63	-0.4
3,992,576	+		Sama_3366	0.63	-1.4
3,992,576	+		Sama_3366	0.63	+0.5
3,992,576	+		Sama_3366	0.63	+0.1
3,992,576	+		Sama_3366	0.63	+1.5
3,992,577	-		Sama_3366	0.63	-0.9
3,992,577	-		Sama_3366	0.63	+0.1
3,992,577	-		Sama_3366	0.63	-0.3
3,992,577	-		Sama_3366	0.63	-0.5
3,992,577	-		Sama_3366	0.63	-0.2
3,992,593	-		Sama_3366	0.64	-0.2
3,992,593	-		Sama_3366	0.64	+0.6
3,992,593	-		Sama_3366	0.64	-0.2
3,992,599	+		Sama_3366	0.64	-1.3
3,992,599	+		Sama_3366	0.64	-0.3
3,992,599	+		Sama_3366	0.64	+1.5
3,992,600	-		Sama_3366	0.64	-1.0
3,992,609	+		Sama_3366	0.65	+1.3
3,992,609	+		Sama_3366	0.65	+0.4
3,992,609	+		Sama_3366	0.65	+1.2
3,992,609	+		Sama_3366	0.65	-0.1
3,992,609	+		Sama_3366	0.65	-1.7
3,992,609	+		Sama_3366	0.65	+1.7
3,992,610	-		Sama_3366	0.65	-0.1
3,992,610	-		Sama_3366	0.65	-0.9
3,992,610	-		Sama_3366	0.65	+1.0
3,992,610	-		Sama_3366	0.65	+0.6
3,992,610	-		Sama_3366	0.65	-1.6
3,992,610	-		Sama_3366	0.65	+1.2
3,992,610	-		Sama_3366	0.65	-0.1
3,992,610	-		Sama_3366	0.65	+2.0
3,992,610	-		Sama_3366	0.65	-0.3
3,992,610	-		Sama_3366	0.65	+0.4
3,992,610	-		Sama_3366	0.65	-0.3
3,992,610	-		Sama_3366	0.65	+1.4
3,992,612	+		Sama_3366	0.65	+0.8
3,992,612	+		Sama_3366	0.65	-1.9
3,992,612	+		Sama_3366	0.65	+0.7
3,992,612	+		Sama_3366	0.65	-0.1
3,992,613	-		Sama_3366	0.65	-0.6
3,992,613	-		Sama_3366	0.65	-0.3
3,992,613	-		Sama_3366	0.65	-0.3
3,992,696	+		Sama_3366	0.70	-1.1
3,992,696	+		Sama_3366	0.70	+1.0
3,992,696	+		Sama_3366	0.70	+0.1
3,992,696	+		Sama_3366	0.70	-0.2
3,992,696	+		Sama_3366	0.70	+1.5
3,992,696	+		Sama_3366	0.70	+0.8
3,992,696	+		Sama_3366	0.70	+1.2
3,992,696	+		Sama_3366	0.70	+2.4
3,992,696	+		Sama_3366	0.70	+0.5
3,992,696	+		Sama_3366	0.70	+0.1
3,992,696	+		Sama_3366	0.70	-0.5
3,992,696	+		Sama_3366	0.70	-0.4
3,992,696	+		Sama_3366	0.70	-1.7
3,992,696	+		Sama_3366	0.70	-0.2
3,992,696	+		Sama_3366	0.70	-0.1
3,992,696	+		Sama_3366	0.70	+0.6
3,992,696	+		Sama_3366	0.70	+3.5
3,992,696	+		Sama_3366	0.70	-0.2
3,992,696	+		Sama_3366	0.70	+0.0
3,992,696	+		Sama_3366	0.70	+0.6
3,992,696	+		Sama_3366	0.70	+1.7
3,992,697	-		Sama_3366	0.71	+0.2
3,992,697	-		Sama_3366	0.71	-0.3
3,992,697	-		Sama_3366	0.71	+0.4
3,992,697	-		Sama_3366	0.71	+0.6
3,992,697	-		Sama_3366	0.71	+0.0
3,992,697	-		Sama_3366	0.71	-0.3
3,992,697	-		Sama_3366	0.71	+0.6
3,992,697	-		Sama_3366	0.71	-0.0
3,992,697	-		Sama_3366	0.71	+0.5
3,992,697	-		Sama_3366	0.71	-1.8
3,992,698	+		Sama_3366	0.71	-1.9
3,992,698	+		Sama_3366	0.71	-0.1
3,992,698	+		Sama_3366	0.71	-0.4
3,992,698	+		Sama_3366	0.71	+0.2
3,992,698	+		Sama_3366	0.71	-1.0
3,992,698	+		Sama_3366	0.71	+1.7
3,992,698	+		Sama_3366	0.71	+0.3
3,992,698	+		Sama_3366	0.71	+0.3
3,992,698	+		Sama_3366	0.71	+0.4
3,992,698	+		Sama_3366	0.71	+0.2
3,992,698	+		Sama_3366	0.71	+0.9
3,992,698	+		Sama_3366	0.71	-0.3
3,992,698	+		Sama_3366	0.71	-0.1
3,992,698	+		Sama_3366	0.71	-0.9
3,992,698	+		Sama_3366	0.71	+1.1
3,992,698	+		Sama_3366	0.71	-0.1
3,992,698	+		Sama_3366	0.71	-1.2
3,992,698	+		Sama_3366	0.71	+0.0
3,992,698	+		Sama_3366	0.71	+0.2
3,992,698	+		Sama_3366	0.71	+0.3
3,992,699	-		Sama_3366	0.71	+1.9
3,992,699	-		Sama_3366	0.71	-0.4
3,992,699	-		Sama_3366	0.71	-0.9
3,992,699	-		Sama_3366	0.71	+0.2
3,992,699	-		Sama_3366	0.71	-2.1
3,992,699	-		Sama_3366	0.71	-0.1
3,992,699	-		Sama_3366	0.71	-0.2
3,992,699	-		Sama_3366	0.71	+0.1
3,992,699	-		Sama_3366	0.71	+0.8
3,992,699	-		Sama_3366	0.71	-1.0
3,992,699	-		Sama_3366	0.71	+1.4
3,992,699	-		Sama_3366	0.71	-0.8
3,992,699	-		Sama_3366	0.71	+1.0
3,992,699	-		Sama_3366	0.71	-0.3
3,992,699	-		Sama_3366	0.71	+1.3
3,992,699	-		Sama_3366	0.71	-0.8
3,992,699	-		Sama_3366	0.71	+0.4
3,992,699	-		Sama_3366	0.71	-0.1
3,992,699	-		Sama_3366	0.71	-0.0
3,992,699	-		Sama_3366	0.71	-0.7
3,992,699	-		Sama_3366	0.71	-1.6
3,992,699	-		Sama_3366	0.71	-1.1
3,992,821	+		Sama_3366	0.79	+1.3
3,992,821	+		Sama_3366	0.79	+0.2
3,992,821	+		Sama_3366	0.79	+0.0
3,992,821	+		Sama_3366	0.79	-0.4
3,992,821	+		Sama_3366	0.79	-0.1
3,992,821	+		Sama_3366	0.79	+0.3
3,992,821	+		Sama_3366	0.79	+0.7
3,992,822	-		Sama_3366	0.79	-0.4
3,992,822	-		Sama_3366	0.79	-0.8
3,992,822	-		Sama_3366	0.79	-1.4
3,992,822	-		Sama_3366	0.79	+0.1
3,992,822	-		Sama_3366	0.79	-0.9
3,992,822	-		Sama_3366	0.79	+0.2
3,992,822	-		Sama_3366	0.79	-2.9
3,992,822	-		Sama_3366	0.79	+0.1
3,992,827	+		Sama_3366	0.79	+0.0
3,992,827	+		Sama_3366	0.79	-1.1
3,992,827	+		Sama_3366	0.79	-1.9
3,992,827	+		Sama_3366	0.79	+0.9
3,992,827	+		Sama_3366	0.79	+1.0
3,992,827	+		Sama_3366	0.79	+0.1
3,992,827	+		Sama_3366	0.79	+1.7
3,992,827	+		Sama_3366	0.79	+3.9
3,992,827	+		Sama_3366	0.79	+0.6
3,992,828	-		Sama_3366	0.79	-1.6
3,992,828	-		Sama_3366	0.79	+0.8
3,992,828	-		Sama_3366	0.79	+0.9
3,992,828	-		Sama_3366	0.79	-0.4
3,992,828	-		Sama_3366	0.79	+1.2
3,992,828	-		Sama_3366	0.79	-0.6
3,992,828	-		Sama_3366	0.79	-0.8
3,992,828	-		Sama_3366	0.79	-0.4
3,992,828	-		Sama_3366	0.79	+0.5
3,992,828	-		Sama_3366	0.79	+0.1
3,992,828	-		Sama_3366	0.79	-1.7
3,992,829	+		Sama_3366	0.79	+0.5
3,992,829	+		Sama_3366	0.79	-0.4
3,992,829	+		Sama_3366	0.79	-1.6
3,992,829	+		Sama_3366	0.79	-0.1
3,992,829	+		Sama_3366	0.79	+1.5
3,992,829	+		Sama_3366	0.79	-0.1
3,992,829	+		Sama_3366	0.79	-0.3
3,992,829	+		Sama_3366	0.79	-0.6
3,992,830	-		Sama_3366	0.79	+0.7
3,992,830	-		Sama_3366	0.79	-1.6
3,992,830	-		Sama_3366	0.79	-0.4
3,992,830	-		Sama_3366	0.79	-0.8
3,992,830	-		Sama_3366	0.79	-0.5
3,992,830	-		Sama_3366	0.79	+1.4
3,992,830	-		Sama_3366	0.79	+1.1
3,992,830	-		Sama_3366	0.79	+0.3
3,992,830	-		Sama_3366	0.79	-2.4
3,992,845	+		Sama_3366	0.80	+1.3
3,992,871	+		Sama_3366	0.82	-0.4
3,992,872	-		Sama_3366	0.82	+2.2
3,992,872	-		Sama_3366	0.82	-2.5
3,992,914	+		Sama_3366	0.85	+1.0
3,992,914	+		Sama_3366	0.85	+0.1
3,992,915	-		Sama_3366	0.85	+0.0
3,992,988	-		Sama_3366	0.89	-0.1
3,992,988	-		Sama_3366	0.89	+0.3
3,992,988	-		Sama_3366	0.89	+0.0
3,993,030	+				+0.7
3,993,054	+				+1.1
3,993,055	-				-1.0
3,993,055	-				+0.5
3,993,073	-				+0.0
3,993,073	-				+0.1
3,993,074	+				+0.1
3,993,074	+				-3.0
3,993,074	+				+0.3
3,993,074	+				-0.9
3,993,074	+				-0.9
3,993,074	+				-0.6
3,993,074	+				+0.6
3,993,074	+				+0.4
3,993,074	+				-0.5
3,993,075	-				-0.9
3,993,075	-				+0.4
3,993,075	-				+0.2
3,993,075	-				+0.5
3,993,075	-				-1.9
3,993,075	-				+0.9
3,993,075	-				+0.6
3,993,075	-				+0.2
3,993,075	-				+0.5
3,993,075	-				-0.9
3,993,078	+				+0.1
3,993,078	+				-1.6
3,993,078	+				-0.4
3,993,079	-				+1.0
3,993,079	-				+0.3
3,993,141	+				+0.8
3,993,141	+				+0.6
3,993,141	+				+0.6
3,993,141	+				-0.1
3,993,142	-				+0.3
3,993,142	-				-0.6
3,993,278	-		Sama_3367	0.11	-2.0
3,993,278	-		Sama_3367	0.11	-2.1
3,993,290	-		Sama_3367	0.12	-2.4
3,993,296	-		Sama_3367	0.12	-1.9
3,993,296	-		Sama_3367	0.12	-1.4
3,993,296	-		Sama_3367	0.12	-3.5
3,993,296	-		Sama_3367	0.12	-1.4
3,993,296	-		Sama_3367	0.12	-2.1
3,993,298	+		Sama_3367	0.12	-1.7
3,993,299	-		Sama_3367	0.12	-1.4
3,993,304	+		Sama_3367	0.13	-1.7
3,993,305	-		Sama_3367	0.13	-1.7
3,993,305	-		Sama_3367	0.13	-1.3
3,993,355	+		Sama_3367	0.18	-1.3
3,993,356	-		Sama_3367	0.18	-1.1
3,993,356	-		Sama_3367	0.18	-1.4
3,993,356	-		Sama_3367	0.18	+0.1
3,993,356	-		Sama_3367	0.18	-0.4
3,993,356	-		Sama_3367	0.18	-0.4
3,993,368	-		Sama_3367	0.19	-1.1
3,993,425	+		Sama_3367	0.24	-1.3
3,993,426	-		Sama_3367	0.24	-0.3
3,993,554	+		Sama_3367	0.36	-1.6
3,993,555	-		Sama_3367	0.36	-1.1
3,993,555	-		Sama_3367	0.36	-1.7
3,993,555	-		Sama_3367	0.36	-0.9
3,993,555	-		Sama_3367	0.36	-2.0
3,993,555	-		Sama_3367	0.36	+0.1
3,993,558	-		Sama_3367	0.36	-1.4
3,993,598	+		Sama_3367	0.40	-0.0
3,993,622	+		Sama_3367	0.42	-2.4
3,993,623	-		Sama_3367	0.42	-2.3
3,993,652	+		Sama_3367	0.45	-2.0
3,993,653	-		Sama_3367	0.45	-1.6
3,993,653	-		Sama_3367	0.45	-2.0
3,993,673	+		Sama_3367	0.47	-0.6
3,993,674	-		Sama_3367	0.47	-1.9
3,993,682	-		Sama_3367	0.48	-1.0
3,993,682	-		Sama_3367	0.48	-2.4
3,993,685	+		Sama_3367	0.48	-1.9
3,993,686	-		Sama_3367	0.48	-2.3
3,993,686	-		Sama_3367	0.48	-0.9
3,993,743	-		Sama_3367	0.54	-1.3
3,993,771	+		Sama_3367	0.56	-2.1
3,993,771	+		Sama_3367	0.56	-0.9
3,993,771	+		Sama_3367	0.56	-1.1
3,993,771	+		Sama_3367	0.56	-2.8
3,993,772	-		Sama_3367	0.56	-1.6
3,993,772	-		Sama_3367	0.56	-0.9
3,993,772	-		Sama_3367	0.56	-2.4
3,993,772	-		Sama_3367	0.56	-1.1
3,993,772	-		Sama_3367	0.56	-0.4
3,993,783	-		Sama_3367	0.57	-0.6
3,993,783	-		Sama_3367	0.57	-2.9
3,993,872	-		Sama_3367	0.66	-2.4
3,994,006	-		Sama_3367	0.78	-1.6
3,994,021	-		Sama_3367	0.79	-3.2
3,994,091	-		Sama_3367	0.86	-1.6
3,994,098	+		Sama_3367	0.86	-1.4
3,994,098	+		Sama_3367	0.86	-1.6
3,994,099	-		Sama_3367	0.87	-2.4