Strain Fitness in Shewanella amazonensis SB2B around Sama_3212

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,801,983	-				-0.6
3,801,995	+				+0.1
3,801,995	+				+0.6
3,801,995	+				-0.4
3,801,995	+				-1.1
3,801,995	+				+0.9
3,801,995	+				+0.3
3,801,996	-				+0.6
3,801,996	-				-0.2
3,801,996	-				-0.3
3,801,996	-				+0.7
3,801,996	-				-0.5
3,801,996	-				-2.0
3,801,998	+				-3.3
3,801,998	+				+0.5
3,802,098	+				-0.5
3,802,099	-				-0.4
3,802,115	-				-0.2
3,802,125	+				+0.5
3,802,125	+				-0.8
3,802,125	+				+0.1
3,802,133	+				-0.3
3,802,134	-				+1.0
3,802,134	-				+0.7
3,802,134	-				-0.2
3,802,134	-				+0.3
3,802,134	-				-1.2
3,802,134	-				-0.1
3,802,176	+				+1.4
3,802,176	+				-0.1
3,802,176	+				-2.2
3,802,176	+				-1.4
3,802,177	-				-1.5
3,802,190	+				-0.1
3,802,191	-				-1.1
3,802,257	+		Sama_3212	0.17	-0.2
3,802,258	-		Sama_3212	0.17	-2.0
3,802,284	+		Sama_3212	0.22	-1.8
3,802,285	-		Sama_3212	0.22	+1.4
3,802,349	+		Sama_3212	0.34	+0.9
3,802,369	+		Sama_3212	0.37	+0.1
3,802,369	+		Sama_3212	0.37	+0.7
3,802,371	+		Sama_3212	0.38	-1.7
3,802,371	+		Sama_3212	0.38	+0.2
3,802,372	-		Sama_3212	0.38	+2.6
3,802,378	+		Sama_3212	0.39	-0.9
3,802,379	-		Sama_3212	0.39	+1.8
3,802,407	+		Sama_3212	0.45	-0.8
3,802,407	+		Sama_3212	0.45	-0.8
3,802,409	+		Sama_3212	0.45	+5.8
3,802,409	+		Sama_3212	0.45	-0.1
3,802,409	+		Sama_3212	0.45	-0.0
3,802,410	-		Sama_3212	0.45	+0.4
3,802,410	-		Sama_3212	0.45	-1.7
3,802,436	+		Sama_3212	0.50	-0.8
3,802,436	+		Sama_3212	0.50	+0.7
3,802,437	-		Sama_3212	0.50	+1.2
3,802,437	-		Sama_3212	0.50	+1.9
3,802,437	-		Sama_3212	0.50	-3.3
3,802,437	-		Sama_3212	0.50	+1.7
3,802,491	+		Sama_3212	0.60	+0.8
3,802,497	+		Sama_3212	0.61	+1.7
3,802,497	+		Sama_3212	0.61	-0.2
3,802,500	+		Sama_3212	0.62	+0.4
3,802,501	-		Sama_3212	0.62	+0.9
3,802,501	-		Sama_3212	0.62	+1.3
3,802,501	-		Sama_3212	0.62	+0.1
3,802,524	+		Sama_3212	0.66	+0.2
3,802,537	+		Sama_3212	0.69	+0.8
3,802,537	+		Sama_3212	0.69	+0.2
3,802,537	+		Sama_3212	0.69	+1.0
3,802,537	+		Sama_3212	0.69	+1.8
3,802,537	+		Sama_3212	0.69	+0.2
3,802,537	+		Sama_3212	0.69	-0.3
3,802,537	+		Sama_3212	0.69	+1.9
3,802,537	+		Sama_3212	0.69	-1.4
3,802,537	+		Sama_3212	0.69	-0.4
3,802,537	+		Sama_3212	0.69	-0.5
3,802,537	+		Sama_3212	0.69	+1.0
3,802,537	+		Sama_3212	0.69	-2.3
3,802,538	-		Sama_3212	0.69	-1.7
3,802,538	-		Sama_3212	0.69	-1.9
3,802,538	-		Sama_3212	0.69	-1.7
3,802,538	-		Sama_3212	0.69	+0.3
3,802,538	-		Sama_3212	0.69	+0.2
3,802,547	+		Sama_3212	0.71	-0.1
3,802,547	+		Sama_3212	0.71	+0.4
3,802,547	+		Sama_3212	0.71	+0.3
3,802,548	-		Sama_3212	0.71	+1.3
3,802,548	-		Sama_3212	0.71	+0.3
3,802,588	+		Sama_3212	0.78	+0.6
3,802,588	+		Sama_3212	0.78	-0.4
3,802,589	-		Sama_3212	0.78	-1.4
3,802,602	+		Sama_3212	0.81	-0.9
3,802,602	+		Sama_3212	0.81	+2.1
3,802,602	+		Sama_3212	0.81	-0.6
3,802,702	+				-0.3
3,802,702	+				-1.1
3,802,702	+				+0.2
3,802,703	-				+1.2
3,802,703	-				+0.7
3,802,775	-				-0.8
3,802,786	+				-1.8
3,802,787	-				-0.0
3,802,787	-				+0.5
3,802,807	+				+0.4
3,802,807	+				+1.2
3,802,807	+				-2.1
3,802,808	-				+0.3
3,802,808	-				+1.2
3,802,808	-				-0.1
3,802,808	-				+0.6
3,802,808	-				+0.7
3,802,808	-				+0.5
3,802,840	+				+0.7
3,802,840	+				-0.9
3,802,840	+				-0.1
3,802,841	-				-1.0
3,802,933	+				-0.6
3,802,933	+				+1.5
3,802,933	+				+0.0
3,802,934	-				+1.1
3,802,934	-				+0.5
3,802,934	-				+0.3
3,802,934	-				-0.2
3,802,934	-				-0.0
3,802,934	-				-0.1
3,802,946	+				+0.9
3,802,947	-				+0.7
3,802,947	-				-2.2
3,802,953	+				+1.2
3,802,953	+				+0.0
3,802,954	-				+0.7
3,802,954	-				-0.4
3,802,954	-				+0.2
3,802,954	-				-2.2
3,802,954	-				+0.5
3,802,954	-				+1.9
3,802,976	+				+1.3
3,802,977	-				+2.5
3,802,979	+				+1.1
3,802,980	-				-1.0
3,802,980	-				+1.2
3,802,980	-				+0.5
3,802,980	-				-1.8
3,802,981	+				+0.5
3,802,981	+				+1.3
3,802,981	+				+0.5
3,802,981	+				-0.4
3,802,982	-				-0.8
3,802,982	-				+1.3
3,802,982	-				-2.7
3,802,982	-				+0.2
3,802,982	-				+2.2
3,802,982	-				+0.6
3,802,982	-				-1.4
3,803,062	+				-0.5
3,803,062	+				-0.2
3,803,062	+				+1.8
3,803,063	-				+1.7
3,803,081	-		Sama_3213	0.10	-0.4
3,803,081	-		Sama_3213	0.10	+0.0
3,803,081	-		Sama_3213	0.10	+0.9
3,803,084	-		Sama_3213	0.10	+0.1
3,803,093	+		Sama_3213	0.11	+0.0
3,803,093	+		Sama_3213	0.11	-0.7
3,803,093	+		Sama_3213	0.11	-0.8
3,803,093	+		Sama_3213	0.11	+0.0
3,803,094	-		Sama_3213	0.11	+0.4
3,803,094	-		Sama_3213	0.11	+1.2
3,803,094	-		Sama_3213	0.11	-0.1
3,803,155	+		Sama_3213	0.13	+2.0
3,803,155	+		Sama_3213	0.13	-1.3
3,803,155	+		Sama_3213	0.13	-0.6
3,803,155	+		Sama_3213	0.13	+0.2
3,803,155	+		Sama_3213	0.13	-0.7
3,803,156	-		Sama_3213	0.13	+0.9
3,803,156	-		Sama_3213	0.13	+0.3
3,803,156	-		Sama_3213	0.13	-0.7
3,803,221	+		Sama_3213	0.15	-0.8
3,803,221	+		Sama_3213	0.15	+3.1
3,803,221	+		Sama_3213	0.15	+0.7
3,803,221	+		Sama_3213	0.15	+0.7
3,803,222	-		Sama_3213	0.15	-0.1
3,803,222	-		Sama_3213	0.15	-1.1
3,803,222	-		Sama_3213	0.15	-1.0
3,803,222	-		Sama_3213	0.15	+0.5
3,803,222	-		Sama_3213	0.15	+1.3
3,803,222	-		Sama_3213	0.15	-0.4
3,803,272	+		Sama_3213	0.17	+0.4
3,803,272	+		Sama_3213	0.17	+0.2
3,803,273	-		Sama_3213	0.17	+0.8
3,803,273	-		Sama_3213	0.17	-0.6
3,803,273	-		Sama_3213	0.17	-0.1
3,803,273	-		Sama_3213	0.17	+1.1
3,803,273	-		Sama_3213	0.17	+1.4
3,803,296	+		Sama_3213	0.17	+1.3
3,803,297	-		Sama_3213	0.17	+0.9
3,803,302	+		Sama_3213	0.17	+0.1
3,803,302	+		Sama_3213	0.17	-1.0
3,803,302	+		Sama_3213	0.17	+0.3
3,803,302	+		Sama_3213	0.17	-0.2
3,803,303	-		Sama_3213	0.18	+1.3
3,803,303	-		Sama_3213	0.18	+0.9
3,803,303	-		Sama_3213	0.18	+0.5
3,803,303	-		Sama_3213	0.18	+0.4
3,803,303	-		Sama_3213	0.18	+1.3
3,803,303	-		Sama_3213	0.18	+1.7
3,803,360	+		Sama_3213	0.19	-3.0
3,803,363	+		Sama_3213	0.20	-0.5
3,803,368	+		Sama_3213	0.20	-0.7
3,803,368	+		Sama_3213	0.20	-0.7
3,803,368	+		Sama_3213	0.20	-1.3
3,803,368	+		Sama_3213	0.20	-0.5
3,803,368	+		Sama_3213	0.20	+1.3
3,803,368	+		Sama_3213	0.20	-0.9
3,803,368	+		Sama_3213	0.20	+1.0
3,803,368	+		Sama_3213	0.20	-0.0
3,803,369	-		Sama_3213	0.20	+1.0
3,803,369	-		Sama_3213	0.20	+0.4
3,803,369	-		Sama_3213	0.20	+1.3
3,803,386	+		Sama_3213	0.20	+0.8
3,803,386	+		Sama_3213	0.20	+0.0
3,803,387	-		Sama_3213	0.20	-0.1
3,803,387	-		Sama_3213	0.20	+0.2
3,803,387	-		Sama_3213	0.20	+0.7
3,803,387	-		Sama_3213	0.20	-0.1
3,803,387	-		Sama_3213	0.20	+0.5
3,803,387	-		Sama_3213	0.20	+0.6
3,803,399	+		Sama_3213	0.21	-0.9
3,803,399	+		Sama_3213	0.21	-0.3
3,803,400	-		Sama_3213	0.21	-0.9
3,803,449	+		Sama_3213	0.22	+2.2
3,803,450	-		Sama_3213	0.22	+0.4
3,803,450	-		Sama_3213	0.22	+0.9
3,803,450	-		Sama_3213	0.22	-0.3
3,803,450	-		Sama_3213	0.22	-2.1
3,803,450	-		Sama_3213	0.22	+0.7
3,803,453	+		Sama_3213	0.23	+1.3
3,803,453	+		Sama_3213	0.23	+1.0
3,803,453	+		Sama_3213	0.23	-0.7
3,803,453	+		Sama_3213	0.23	-0.2
3,803,453	+		Sama_3213	0.23	+0.2
3,803,453	+		Sama_3213	0.23	+3.3
3,803,453	+		Sama_3213	0.23	+0.6
3,803,453	+		Sama_3213	0.23	-0.9
3,803,453	+		Sama_3213	0.23	+0.4
3,803,454	-		Sama_3213	0.23	-0.8
3,803,454	-		Sama_3213	0.23	+0.1
3,803,454	-		Sama_3213	0.23	-0.3
3,803,454	-		Sama_3213	0.23	+0.3
3,803,454	-		Sama_3213	0.23	-0.1
3,803,454	-		Sama_3213	0.23	+0.1
3,803,454	-		Sama_3213	0.23	+0.0
3,803,454	-		Sama_3213	0.23	-0.2
3,803,454	-		Sama_3213	0.23	+0.2
3,803,454	-		Sama_3213	0.23	-0.5
3,803,454	-		Sama_3213	0.23	+0.8
3,803,454	-		Sama_3213	0.23	+1.3
3,803,454	-		Sama_3213	0.23	+0.6
3,803,454	-		Sama_3213	0.23	+0.5
3,803,489	+		Sama_3213	0.24	-1.3
3,803,489	+		Sama_3213	0.24	-0.6
3,803,490	-		Sama_3213	0.24	+1.9
3,803,490	-		Sama_3213	0.24	-0.5
3,803,490	-		Sama_3213	0.24	-0.1
3,803,502	-		Sama_3213	0.24	-0.6
3,803,502	-		Sama_3213	0.24	-1.6
3,803,530	+		Sama_3213	0.25	-1.1
3,803,558	+		Sama_3213	0.26	-1.4
3,803,569	+		Sama_3213	0.26	+0.4
3,803,569	+		Sama_3213	0.26	+1.3
3,803,569	+		Sama_3213	0.26	-0.6
3,803,569	+		Sama_3213	0.26	-0.4
3,803,569	+		Sama_3213	0.26	-0.2
3,803,569	+		Sama_3213	0.26	+0.5
3,803,570	-		Sama_3213	0.26	+0.3
3,803,570	-		Sama_3213	0.26	+0.4
3,803,570	-		Sama_3213	0.26	-1.7
3,803,570	-		Sama_3213	0.26	-0.9
3,803,570	-		Sama_3213	0.26	-1.1
3,803,570	-		Sama_3213	0.26	-0.6
3,803,570	-		Sama_3213	0.26	-0.4
3,803,570	-		Sama_3213	0.26	+0.6
3,803,572	+		Sama_3213	0.26	+0.6
3,803,572	+		Sama_3213	0.26	+1.0
3,803,572	+		Sama_3213	0.26	-0.9
3,803,572	+		Sama_3213	0.26	+1.7
3,803,572	+		Sama_3213	0.26	-0.4
3,803,572	+		Sama_3213	0.26	+1.5
3,803,572	+		Sama_3213	0.26	+0.1
3,803,573	-		Sama_3213	0.27	-1.5
3,803,573	-		Sama_3213	0.27	-1.1
3,803,573	-		Sama_3213	0.27	-0.8
3,803,674	+		Sama_3213	0.30	-0.4