Strain Fitness in Shewanella amazonensis SB2B around Sama_2928

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,481,161	-		Sama_2926	0.46	-1.5
3,481,161	-		Sama_2926	0.46	-1.7
3,481,297	-		Sama_2926	0.66	-1.5
3,481,356	+		Sama_2926	0.74	-3.3
3,481,365	+		Sama_2926	0.75	-2.7
3,481,366	-		Sama_2926	0.76	-1.8
3,481,366	-		Sama_2926	0.76	-1.9
3,481,366	-		Sama_2926	0.76	-2.0
3,481,406	-		Sama_2926	0.81	-2.0
3,481,406	-		Sama_2926	0.81	-1.9
3,481,412	+		Sama_2926	0.82	-1.8
3,481,447	-		Sama_2926	0.87	-2.2
3,481,447	-		Sama_2926	0.87	-2.4
3,481,447	-		Sama_2926	0.87	-0.6
3,481,461	+		Sama_2926	0.89	-2.0
3,481,461	+		Sama_2926	0.89	-2.9
3,481,461	+		Sama_2926	0.89	-1.0
3,481,482	+				-1.6
3,481,502	+				-0.9
3,481,503	-				-2.2
3,481,503	-				-1.6
3,481,503	-				-2.0
3,481,526	-				-3.2
3,481,526	-				+0.6
3,481,535	+				-1.2
3,481,535	+				-2.1
3,481,536	-				-2.0
3,481,536	-				-3.0
3,481,536	-				-1.4
3,481,536	-				-2.3
3,481,581	+		Sama_2927	0.11	-2.7
3,481,581	+		Sama_2927	0.11	-1.6
3,481,581	+		Sama_2927	0.11	-2.0
3,481,582	-		Sama_2927	0.11	-2.4
3,481,582	-		Sama_2927	0.11	-2.5
3,481,665	-		Sama_2927	0.30	-1.3
3,481,665	-		Sama_2927	0.30	-2.8
3,481,685	+		Sama_2927	0.35	-1.5
3,481,685	+		Sama_2927	0.35	-0.7
3,481,699	+		Sama_2927	0.38	-1.7
3,481,699	+		Sama_2927	0.38	-1.6
3,481,699	+		Sama_2927	0.38	-3.0
3,481,699	+		Sama_2927	0.38	-3.1
3,481,700	-		Sama_2927	0.38	-1.0
3,481,700	-		Sama_2927	0.38	-0.4
3,481,700	-		Sama_2927	0.38	-2.6
3,481,700	-		Sama_2927	0.38	-3.5
3,481,782	+		Sama_2927	0.57	-1.2
3,481,782	+		Sama_2927	0.57	+1.4
3,481,782	+		Sama_2927	0.57	-1.6
3,481,783	-		Sama_2927	0.58	-1.2
3,481,783	-		Sama_2927	0.58	-3.0
3,481,783	-		Sama_2927	0.58	-2.0
3,481,805	-		Sama_2927	0.63	-1.6
3,481,848	-		Sama_2927	0.73	-1.6
3,481,972	+				-2.4
3,481,972	+				+1.4
3,481,982	-				-0.1
3,481,982	-				-3.1
3,481,998	+				-2.5
3,481,999	-				-1.7
3,481,999	-				-0.6
3,481,999	-				-2.3
3,481,999	-				-0.2
3,482,003	+				-1.6
3,482,003	+				-1.2
3,482,003	+				+0.6
3,482,004	-				-0.6
3,482,036	+				-0.2
3,482,046	+				-2.0
3,482,046	+				-2.6
3,482,047	-				-0.2
3,482,053	-				-1.2
3,482,090	+				-1.7
3,482,090	+				-2.5
3,482,090	+				-2.1
3,482,090	+				-1.8
3,482,090	+				-3.2
3,482,091	-				-0.6
3,482,091	-				-0.8
3,482,091	-				-1.7
3,482,096	-				-1.5
3,482,175	+		Sama_2928	0.12	-2.6
3,482,175	+		Sama_2928	0.12	-1.4
3,482,175	+		Sama_2928	0.12	-1.4
3,482,176	-		Sama_2928	0.12	-3.0
3,482,238	+		Sama_2928	0.19	-2.4
3,482,239	-		Sama_2928	0.19	-2.6
3,482,239	-		Sama_2928	0.19	-1.2
3,482,267	+		Sama_2928	0.22	-1.2
3,482,267	+		Sama_2928	0.22	-1.7
3,482,267	+		Sama_2928	0.22	-0.7
3,482,268	-		Sama_2928	0.22	-2.5
3,482,423	+		Sama_2928	0.40	-0.8
3,482,423	+		Sama_2928	0.40	-1.8
3,482,424	-		Sama_2928	0.40	-0.2
3,482,437	+		Sama_2928	0.41	-2.8
3,482,438	-		Sama_2928	0.41	-0.5
3,482,438	-		Sama_2928	0.41	-3.7
3,482,438	-		Sama_2928	0.41	-3.0
3,482,568	+		Sama_2928	0.56	-2.4
3,482,568	+		Sama_2928	0.56	-1.3
3,482,568	+		Sama_2928	0.56	-1.6
3,482,644	+		Sama_2928	0.65	-1.2
3,482,645	-		Sama_2928	0.65	-2.9
3,482,645	-		Sama_2928	0.65	-2.3
3,482,645	-		Sama_2928	0.65	-0.8
3,482,645	-		Sama_2928	0.65	-2.1
3,482,663	+		Sama_2928	0.67	-1.8
3,482,752	+		Sama_2928	0.77	-1.6
3,482,752	+		Sama_2928	0.77	-1.4
3,482,753	-		Sama_2928	0.77	-3.6
3,482,773	+		Sama_2928	0.79	-2.2
3,482,773	+		Sama_2928	0.79	-0.0
3,482,787	+		Sama_2928	0.81	-3.2
3,482,787	+		Sama_2928	0.81	-1.9
3,482,787	+		Sama_2928	0.81	-2.1
3,482,788	-		Sama_2928	0.81	-1.7
3,482,798	+		Sama_2928	0.82	-2.6
3,482,798	+		Sama_2928	0.82	+0.5
3,482,798	+		Sama_2928	0.82	-1.8
3,482,798	+		Sama_2928	0.82	-1.8
3,482,798	+		Sama_2928	0.82	-1.6
3,482,798	+		Sama_2928	0.82	-1.6
3,482,798	+		Sama_2928	0.82	-1.5
3,482,798	+		Sama_2928	0.82	-1.2
3,482,798	+		Sama_2928	0.82	-2.0
3,482,798	+		Sama_2928	0.82	-2.5
3,482,798	+		Sama_2928	0.82	+0.5
3,482,798	+		Sama_2928	0.82	-1.9
3,482,798	+		Sama_2928	0.82	-1.3
3,482,798	+		Sama_2928	0.82	-3.3
3,482,798	+		Sama_2928	0.82	-1.4
3,482,798	+		Sama_2928	0.82	+0.3
3,482,798	+		Sama_2928	0.82	-3.0
3,482,799	-		Sama_2928	0.82	-1.4
3,482,799	-		Sama_2928	0.82	-2.7
3,482,799	-		Sama_2928	0.82	-0.7
3,482,799	-		Sama_2928	0.82	-2.6
3,482,800	+		Sama_2928	0.82	-2.7
3,482,801	-		Sama_2928	0.82	-2.1
3,482,801	-		Sama_2928	0.82	-2.9
3,482,877	+				-2.2
3,482,925	+				-3.6
3,482,957	+				+0.7
3,482,957	+				-0.7
3,482,958	-				+0.7
3,482,958	-				-1.1
3,482,968	+				-0.3
3,482,968	+				-0.7
3,482,968	+				-0.7
3,482,969	-				-0.8
3,482,969	-				+0.0
3,482,969	-				-0.0
3,482,969	-				+0.0
3,482,969	-				-0.7
3,482,969	-				-0.3
3,482,969	-				-1.6
3,483,024	+				-0.6
3,483,024	+				+0.1
3,483,032	+				-1.0
3,483,033	-				-1.2
3,483,033	-				+0.4
3,483,033	-				+0.1
3,483,037	+				-0.1
3,483,037	+				-0.1
3,483,038	-				-0.2
3,483,038	-				-0.5
3,483,038	-				-0.3
3,483,042	+				-0.3
3,483,042	+				+0.2
3,483,043	-				+0.3
3,483,051	+				+0.2
3,483,051	+				-0.6
3,483,087	+				-0.9
3,483,087	+				+0.1
3,483,087	+				-1.2
3,483,088	-				+0.2
3,483,088	-				-2.2
3,483,088	-				-0.8
3,483,088	-				+1.3
3,483,096	+				+0.6
3,483,096	+				-2.6
3,483,097	-				+0.2
3,483,097	-				-0.5
3,483,097	-				-0.5
3,483,097	-				-0.9
3,483,132	+		Sama_2929	0.13	+0.7
3,483,133	-		Sama_2929	0.13	-0.1
3,483,133	-		Sama_2929	0.13	+0.6
3,483,148	+		Sama_2929	0.15	-0.8
3,483,148	+		Sama_2929	0.15	-0.2
3,483,149	-		Sama_2929	0.15	+1.0
3,483,172	+		Sama_2929	0.18	+1.6
3,483,173	-		Sama_2929	0.18	-1.8
3,483,173	-		Sama_2929	0.18	-0.5
3,483,173	-		Sama_2929	0.18	+2.0
3,483,173	-		Sama_2929	0.18	+0.3
3,483,173	-		Sama_2929	0.18	-3.3
3,483,174	+		Sama_2929	0.19	-0.7
3,483,175	-		Sama_2929	0.19	+0.9
3,483,175	-		Sama_2929	0.19	-0.8
3,483,175	-		Sama_2929	0.19	+1.1
3,483,175	-		Sama_2929	0.19	-1.3
3,483,175	-		Sama_2929	0.19	+1.0
3,483,176	+		Sama_2929	0.19	+0.5
3,483,177	-		Sama_2929	0.19	-0.2
3,483,188	-		Sama_2929	0.20	-0.0
3,483,190	+		Sama_2929	0.20	+1.9
3,483,191	-		Sama_2929	0.21	-2.6
3,483,211	-		Sama_2929	0.23	+0.5
3,483,247	-		Sama_2929	0.27	-0.1
3,483,287	+		Sama_2929	0.32	-0.3
3,483,287	+		Sama_2929	0.32	-3.5
3,483,287	+		Sama_2929	0.32	+1.2
3,483,287	+		Sama_2929	0.32	+0.4
3,483,287	+		Sama_2929	0.32	+0.2
3,483,288	-		Sama_2929	0.32	-3.3
3,483,288	-		Sama_2929	0.32	-0.3
3,483,288	-		Sama_2929	0.32	+1.1
3,483,288	-		Sama_2929	0.32	+0.1
3,483,288	-		Sama_2929	0.32	+0.9
3,483,288	-		Sama_2929	0.32	-0.1
3,483,288	-		Sama_2929	0.32	+0.5
3,483,291	+		Sama_2929	0.33	-2.0
3,483,291	+		Sama_2929	0.33	-0.5
3,483,291	+		Sama_2929	0.33	+0.5
3,483,291	+		Sama_2929	0.33	-0.2
3,483,292	-		Sama_2929	0.33	-0.5
3,483,292	-		Sama_2929	0.33	-0.9
3,483,292	-		Sama_2929	0.33	+1.3
3,483,292	-		Sama_2929	0.33	+1.0
3,483,292	-		Sama_2929	0.33	+0.4
3,483,348	+		Sama_2929	0.40	-2.2
3,483,390	+		Sama_2929	0.45	+0.8
3,483,390	+		Sama_2929	0.45	+0.2
3,483,390	+		Sama_2929	0.45	-1.0
3,483,390	+		Sama_2929	0.45	+0.1
3,483,390	+		Sama_2929	0.45	+1.7
3,483,390	+		Sama_2929	0.45	+0.2
3,483,390	+		Sama_2929	0.45	+0.6
3,483,390	+		Sama_2929	0.45	-1.4
3,483,390	+		Sama_2929	0.45	+0.3
3,483,391	-		Sama_2929	0.45	-1.1
3,483,391	-		Sama_2929	0.45	+0.0
3,483,391	-		Sama_2929	0.45	-0.1
3,483,391	-		Sama_2929	0.45	-0.1
3,483,391	-		Sama_2929	0.45	+0.4
3,483,391	-		Sama_2929	0.45	-0.0
3,483,391	-		Sama_2929	0.45	+0.4
3,483,393	+		Sama_2929	0.45	+0.2
3,483,393	+		Sama_2929	0.45	-2.3
3,483,393	+		Sama_2929	0.45	-0.4
3,483,438	+		Sama_2929	0.51	-0.1
3,483,438	+		Sama_2929	0.51	-0.5
3,483,493	+		Sama_2929	0.58	+0.3
3,483,494	-		Sama_2929	0.58	-2.0
3,483,494	-		Sama_2929	0.58	+0.1
3,483,494	-		Sama_2929	0.58	-0.6
3,483,494	-		Sama_2929	0.58	+0.6
3,483,503	-		Sama_2929	0.59	-0.2
3,483,570	+		Sama_2929	0.67	-0.5
3,483,570	+		Sama_2929	0.67	+1.0
3,483,570	+		Sama_2929	0.67	-0.1
3,483,570	+		Sama_2929	0.67	-0.3
3,483,570	+		Sama_2929	0.67	-0.5
3,483,570	+		Sama_2929	0.67	-0.3
3,483,570	+		Sama_2929	0.67	+1.6
3,483,570	+		Sama_2929	0.67	-0.8
3,483,571	-		Sama_2929	0.67	-0.0
3,483,571	-		Sama_2929	0.67	-0.6
3,483,573	+		Sama_2929	0.67	-0.6
3,483,573	+		Sama_2929	0.67	+0.6
3,483,573	+		Sama_2929	0.67	-0.5
3,483,574	-		Sama_2929	0.68	-0.9
3,483,574	-		Sama_2929	0.68	+0.5
3,483,574	-		Sama_2929	0.68	-1.0
3,483,592	+		Sama_2929	0.70	-0.6
3,483,593	-		Sama_2929	0.70	+2.3
3,483,593	-		Sama_2929	0.70	-0.2
3,483,636	+		Sama_2929	0.75	+2.1
3,483,636	+		Sama_2929	0.75	-1.8
3,483,636	+		Sama_2929	0.75	-0.9
3,483,636	+		Sama_2929	0.75	+0.3
3,483,636	+		Sama_2929	0.75	+0.2
3,483,636	+		Sama_2929	0.75	+0.3
3,483,636	+		Sama_2929	0.75	-1.6
3,483,636	+		Sama_2929	0.75	-3.6
3,483,636	+		Sama_2929	0.75	+0.8
3,483,637	-		Sama_2929	0.75	+1.0
3,483,637	-		Sama_2929	0.75	-1.0
3,483,637	-		Sama_2929	0.75	+0.6
3,483,637	-		Sama_2929	0.75	-0.2
3,483,637	-		Sama_2929	0.75	-1.4
3,483,637	-		Sama_2929	0.75	-0.0
3,483,637	-		Sama_2929	0.75	+2.4
3,483,637	-		Sama_2929	0.75	-0.4
3,483,637	-		Sama_2929	0.75	-0.7
3,483,637	-		Sama_2929	0.75	+0.6
3,483,637	-		Sama_2929	0.75	+3.0
3,483,637	-		Sama_2929	0.75	+0.4
3,483,637	-		Sama_2929	0.75	-0.9
3,483,637	-		Sama_2929	0.75	-0.0
3,483,637	-		Sama_2929	0.75	+0.4
3,483,637	-		Sama_2929	0.75	-0.2
3,483,637	-		Sama_2929	0.75	-0.2
3,483,637	-		Sama_2929	0.75	-0.1
3,483,637	-		Sama_2929	0.75	+1.7
3,483,637	-		Sama_2929	0.75	+0.4
3,483,637	-		Sama_2929	0.75	+0.9
3,483,637	-		Sama_2929	0.75	+0.5
3,483,640	+		Sama_2929	0.76	+0.7
3,483,641	-		Sama_2929	0.76	-0.4
3,483,641	-		Sama_2929	0.76	+1.3
3,483,649	+		Sama_2929	0.77	-1.0
3,483,649	+		Sama_2929	0.77	-0.3
3,483,650	-		Sama_2929	0.77	-0.5
3,483,819	-				+0.0
3,483,826	+				-0.1
3,483,826	+				-0.1
3,483,826	+				-1.0
3,483,826	+				+2.4
3,483,826	+				+0.4
3,483,826	+				+1.9
3,483,826	+				+1.3
3,483,826	+				+0.8
3,483,826	+				-0.0
3,483,827	-				-0.3
3,483,827	-				-0.1
3,483,827	-				-0.4
3,483,827	-				+1.8
3,483,827	-				-0.8
3,483,827	-				-2.8
3,483,827	-				-0.4
3,483,827	-				-1.0
3,483,827	-				+0.4
3,483,827	-				-1.1
3,483,841	+				-1.6
3,483,907	+				-1.4
3,483,908	-				-2.1
3,483,908	-				+0.1
3,483,908	-				+1.6
3,483,908	-				+0.4
3,483,910	+				-1.3
3,483,910	+				+0.4
3,483,910	+				-1.9