Strain Fitness in Shewanella amazonensis SB2B around Sama_2886

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,425,773	-				+0.2
3,425,793	+				-0.2
3,425,793	+				+0.4
3,425,793	+				+0.4
3,425,794	-				+0.7
3,425,794	-				-1.9
3,425,794	-				+0.8
3,425,794	-				+0.0
3,425,794	-				-0.1
3,425,795	+				-0.1
3,425,796	-				+0.4
3,425,796	-				-0.5
3,425,796	-				-0.2
3,425,796	-				+1.6
3,425,812	-				-0.2
3,425,835	+				-0.9
3,425,838	+				-2.8
3,425,838	+				-0.6
3,425,838	+				+0.0
3,425,938	+		Sama_2885	0.39	-0.0
3,425,939	-		Sama_2885	0.40	-0.4
3,425,939	-		Sama_2885	0.40	-0.6
3,425,948	+		Sama_2885	0.45	-1.1
3,425,948	+		Sama_2885	0.45	+0.6
3,425,948	+		Sama_2885	0.45	-2.7
3,425,949	-		Sama_2885	0.45	+1.1
3,425,949	-		Sama_2885	0.45	+1.9
3,425,949	-		Sama_2885	0.45	+0.3
3,425,949	-		Sama_2885	0.45	-0.1
3,425,949	-		Sama_2885	0.45	-0.0
3,425,949	-		Sama_2885	0.45	-1.2
3,426,058	+				+0.6
3,426,058	+				-2.2
3,426,059	-				-1.4
3,426,059	-				-0.2
3,426,059	-				+0.2
3,426,062	-				-0.9
3,426,070	-				-0.8
3,426,084	-				+0.9
3,426,084	-				-0.5
3,426,084	-				+1.1
3,426,084	-				-0.7
3,426,084	-				-1.9
3,426,084	-				+1.9
3,426,113	+				+0.4
3,426,114	-				-1.0
3,426,114	-				-0.8
3,426,132	+				+0.4
3,426,133	-				-0.9
3,426,133	-				+1.2
3,426,133	-				-0.9
3,426,133	-				+0.3
3,426,147	-				+0.2
3,426,164	+				-0.6
3,426,164	+				-1.4
3,426,165	-				-0.7
3,426,165	-				-0.6
3,426,165	-				-0.2
3,426,167	+				+3.5
3,426,168	-				+0.4
3,426,173	+				-0.5
3,426,197	+				-1.3
3,426,203	+				-0.3
3,426,203	+				-0.1
3,426,203	+				-4.4
3,426,203	+				-1.1
3,426,316	-				+1.6
3,426,341	+				-0.4
3,426,343	+				-0.4
3,426,343	+				+0.2
3,426,344	-				+1.2
3,426,344	-				+0.3
3,426,379	-				-0.1
3,426,379	-				-0.3
3,426,390	+				-2.1
3,426,423	-				-0.6
3,426,430	+				-0.2
3,426,431	-				+0.5
3,426,431	-				-1.8
3,426,431	-				-0.8
3,426,433	+				+1.1
3,426,433	+				-1.8
3,426,434	-				+0.2
3,426,458	-				+0.2
3,426,485	+				+0.2
3,426,486	-				+0.5
3,426,486	-				-1.2
3,426,492	-				+0.6
3,426,498	-				+0.2
3,426,515	+				+3.9
3,426,515	+				+0.1
3,426,516	-				-1.3
3,426,516	-				-1.1
3,426,516	-				-1.0
3,426,519	+				-2.6
3,426,519	+				-0.3
3,426,519	+				+0.1
3,426,520	-				-1.2
3,426,520	-				-0.0
3,426,520	-				-0.2
3,426,520	-				-0.5
3,426,520	-				+1.9
3,426,520	-				+1.1
3,426,522	-				+0.3
3,426,522	-				-0.6
3,426,537	-				-0.3
3,426,660	-				-1.0
3,426,662	+				+0.2
3,426,662	+				+0.4
3,426,662	+				-0.9
3,426,662	+				-0.5
3,426,685	+				-1.2
3,426,728	+		Sama_2886	0.15	+0.4
3,426,728	+		Sama_2886	0.15	+0.0
3,426,728	+		Sama_2886	0.15	-0.0
3,426,728	+		Sama_2886	0.15	+1.0
3,426,728	+		Sama_2886	0.15	-0.4
3,426,729	-		Sama_2886	0.16	+0.2
3,426,729	-		Sama_2886	0.16	+1.1
3,426,729	-		Sama_2886	0.16	+0.1
3,426,729	-		Sama_2886	0.16	-2.0
3,426,737	-		Sama_2886	0.17	-1.1
3,426,750	+		Sama_2886	0.19	+0.2
3,426,751	-		Sama_2886	0.19	+0.6
3,426,751	-		Sama_2886	0.19	-0.1
3,426,847	+		Sama_2886	0.33	+0.2
3,426,847	+		Sama_2886	0.33	+0.1
3,426,847	+		Sama_2886	0.33	-0.3
3,426,847	+		Sama_2886	0.33	-0.8
3,426,848	-		Sama_2886	0.33	-0.4
3,426,848	-		Sama_2886	0.33	-1.0
3,426,848	-		Sama_2886	0.33	+0.4
3,426,849	+		Sama_2886	0.33	+0.5
3,426,849	+		Sama_2886	0.33	-0.0
3,426,849	+		Sama_2886	0.33	+1.0
3,426,849	+		Sama_2886	0.33	+1.1
3,426,849	+		Sama_2886	0.33	+0.4
3,426,849	+		Sama_2886	0.33	-1.3
3,426,849	+		Sama_2886	0.33	-0.7
3,426,849	+		Sama_2886	0.33	+1.3
3,426,849	+		Sama_2886	0.33	+3.7
3,426,849	+		Sama_2886	0.33	+0.5
3,426,850	-		Sama_2886	0.33	-0.4
3,426,850	-		Sama_2886	0.33	+0.4
3,426,850	-		Sama_2886	0.33	+1.0
3,426,850	-		Sama_2886	0.33	+1.7
3,426,850	-		Sama_2886	0.33	-1.3
3,426,850	-		Sama_2886	0.33	-0.0
3,426,850	-		Sama_2886	0.33	-1.1
3,426,859	+		Sama_2886	0.35	-1.2
3,426,859	+		Sama_2886	0.35	+0.5
3,426,859	+		Sama_2886	0.35	-1.0
3,426,859	+		Sama_2886	0.35	-1.1
3,426,859	+		Sama_2886	0.35	-0.2
3,426,859	+		Sama_2886	0.35	+0.4
3,426,860	-		Sama_2886	0.35	+1.8
3,426,860	-		Sama_2886	0.35	-1.0
3,426,860	-		Sama_2886	0.35	-0.2
3,426,860	-		Sama_2886	0.35	+0.2
3,426,860	-		Sama_2886	0.35	-0.7
3,426,860	-		Sama_2886	0.35	+1.4
3,426,860	-		Sama_2886	0.35	-0.8
3,426,862	+		Sama_2886	0.35	+0.7
3,426,862	+		Sama_2886	0.35	+0.3
3,426,862	+		Sama_2886	0.35	-1.3
3,426,862	+		Sama_2886	0.35	-0.6
3,426,862	+		Sama_2886	0.35	+2.4
3,426,862	+		Sama_2886	0.35	-0.9
3,426,862	+		Sama_2886	0.35	-0.9
3,426,863	-		Sama_2886	0.35	+0.7
3,426,863	-		Sama_2886	0.35	-0.7
3,426,863	-		Sama_2886	0.35	+1.9
3,426,863	-		Sama_2886	0.35	+0.3
3,426,863	-		Sama_2886	0.35	-0.1
3,426,863	-		Sama_2886	0.35	+1.0
3,426,863	-		Sama_2886	0.35	-0.1
3,426,863	-		Sama_2886	0.35	+0.7
3,426,873	+		Sama_2886	0.37	+1.6
3,426,873	+		Sama_2886	0.37	-0.6
3,426,874	-		Sama_2886	0.37	+1.6
3,426,874	-		Sama_2886	0.37	-0.2
3,426,895	+		Sama_2886	0.40	+0.0
3,426,895	+		Sama_2886	0.40	-1.8
3,426,896	-		Sama_2886	0.40	-0.7
3,426,896	-		Sama_2886	0.40	+0.5
3,426,896	-		Sama_2886	0.40	-0.2
3,426,897	+		Sama_2886	0.40	+0.5
3,426,897	+		Sama_2886	0.40	-1.6
3,426,897	+		Sama_2886	0.40	-0.5
3,426,897	+		Sama_2886	0.40	-0.2
3,426,898	-		Sama_2886	0.41	-0.6
3,426,898	-		Sama_2886	0.41	-0.8
3,426,898	-		Sama_2886	0.41	+0.1
3,426,898	-		Sama_2886	0.41	-2.6
3,426,898	-		Sama_2886	0.41	-0.2
3,426,898	-		Sama_2886	0.41	-0.2
3,426,898	-		Sama_2886	0.41	-0.0
3,426,898	-		Sama_2886	0.41	-0.3
3,426,898	-		Sama_2886	0.41	-2.1
3,426,898	-		Sama_2886	0.41	-0.9
3,426,916	+		Sama_2886	0.43	-1.8
3,426,916	+		Sama_2886	0.43	-1.0
3,426,916	+		Sama_2886	0.43	-0.2
3,426,916	+		Sama_2886	0.43	+0.7
3,426,916	+		Sama_2886	0.43	+0.8
3,426,917	-		Sama_2886	0.43	-0.8
3,427,007	+		Sama_2886	0.57	+0.9
3,427,008	-		Sama_2886	0.57	-0.1
3,427,031	+		Sama_2886	0.60	-1.6
3,427,044	+		Sama_2886	0.62	-2.8
3,427,045	-		Sama_2886	0.62	+0.5
3,427,091	+		Sama_2886	0.69	+0.1
3,427,091	+		Sama_2886	0.69	-2.0
3,427,092	-		Sama_2886	0.69	-2.7
3,427,092	-		Sama_2886	0.69	+0.2
3,427,094	-		Sama_2886	0.69	+1.6
3,427,094	-		Sama_2886	0.69	-0.2
3,427,139	+		Sama_2886	0.76	-0.2
3,427,140	-		Sama_2886	0.76	+0.5
3,427,140	-		Sama_2886	0.76	-0.5
3,427,140	-		Sama_2886	0.76	-0.1
3,427,245	+				+0.2
3,427,246	-				-0.4
3,427,246	-				-0.7
3,427,246	-				-0.7
3,427,246	-				+0.4
3,427,247	+				-0.4
3,427,248	-				-0.7
3,427,248	-				-1.3
3,427,264	-				-0.9
3,427,282	-				+0.6
3,427,282	-				+0.1
3,427,282	-				-2.8
3,427,285	+				-0.0
3,427,312	+				+1.0
3,427,326	-				+1.4
3,427,342	-				+0.3
3,427,368	-				-0.8
3,427,376	+				-0.6
3,427,410	+				-0.1
3,427,410	+				-0.2
3,427,427	-				+0.1
3,427,451	+		Sama_2887	0.11	-2.7
3,427,452	-		Sama_2887	0.11	-1.1
3,427,476	-		Sama_2887	0.13	+0.0
3,427,480	-		Sama_2887	0.13	+0.7
3,427,480	-		Sama_2887	0.13	-0.3
3,427,587	-		Sama_2887	0.21	+0.2
3,427,587	-		Sama_2887	0.21	-0.7
3,427,706	+		Sama_2887	0.31	+0.1
3,427,706	+		Sama_2887	0.31	+2.3
3,427,714	-		Sama_2887	0.31	-0.1
3,427,881	+		Sama_2887	0.44	+1.3
3,427,915	+		Sama_2887	0.47	-0.0
3,427,918	-		Sama_2887	0.47	-1.2
3,427,937	+		Sama_2887	0.49	+0.5
3,427,980	+		Sama_2887	0.52	+0.1
3,427,981	-		Sama_2887	0.52	+0.7
3,428,003	+		Sama_2887	0.54	-1.2
3,428,003	+		Sama_2887	0.54	-0.1
3,428,003	+		Sama_2887	0.54	-0.6
3,428,003	+		Sama_2887	0.54	-0.4
3,428,003	+		Sama_2887	0.54	-0.4
3,428,003	+		Sama_2887	0.54	-1.1
3,428,004	-		Sama_2887	0.54	+1.3
3,428,004	-		Sama_2887	0.54	+1.7
3,428,005	+		Sama_2887	0.54	-0.0
3,428,006	-		Sama_2887	0.54	+1.2
3,428,014	-		Sama_2887	0.55	+1.6
3,428,014	-		Sama_2887	0.55	+0.7
3,428,071	+		Sama_2887	0.59	-1.0
3,428,071	+		Sama_2887	0.59	-0.1
3,428,072	-		Sama_2887	0.59	+0.3
3,428,073	+		Sama_2887	0.59	-0.0
3,428,073	+		Sama_2887	0.59	-1.0
3,428,073	+		Sama_2887	0.59	+1.8
3,428,074	-		Sama_2887	0.60	-0.1
3,428,074	-		Sama_2887	0.60	+1.0
3,428,074	-		Sama_2887	0.60	+0.9
3,428,074	-		Sama_2887	0.60	+3.4
3,428,100	+		Sama_2887	0.62	-1.3
3,428,136	-		Sama_2887	0.64	-1.3
3,428,159	-		Sama_2887	0.66	-0.0
3,428,196	+		Sama_2887	0.69	+1.1
3,428,241	-		Sama_2887	0.73	+0.1
3,428,268	+		Sama_2887	0.75	+0.2
3,428,269	-		Sama_2887	0.75	-0.6
3,428,269	-		Sama_2887	0.75	+0.6