Strain Fitness in Shewanella amazonensis SB2B around Sama_2661

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,183,804	+		Sama_2660	0.18	+0.2
3,183,804	+		Sama_2660	0.18	-0.2
3,183,804	+		Sama_2660	0.18	-0.7
3,183,804	+		Sama_2660	0.18	-1.4
3,183,804	+		Sama_2660	0.18	-1.7
3,183,804	+		Sama_2660	0.18	-0.0
3,183,804	+		Sama_2660	0.18	+0.4
3,183,804	+		Sama_2660	0.18	+0.2
3,183,805	-		Sama_2660	0.18	+1.7
3,183,805	-		Sama_2660	0.18	+0.2
3,183,807	+		Sama_2660	0.18	-0.6
3,183,808	-		Sama_2660	0.18	+0.3
3,183,808	-		Sama_2660	0.18	-0.3
3,183,871	+		Sama_2660	0.24	+0.2
3,183,871	+		Sama_2660	0.24	-0.8
3,183,872	-		Sama_2660	0.24	+0.3
3,183,895	-		Sama_2660	0.26	-0.5
3,183,912	+		Sama_2660	0.27	+2.8
3,184,051	+		Sama_2660	0.40	-1.1
3,184,052	-		Sama_2660	0.40	-0.1
3,184,293	+		Sama_2660	0.61	+1.1
3,184,293	+		Sama_2660	0.61	+0.6
3,184,293	+		Sama_2660	0.61	-0.5
3,184,294	-		Sama_2660	0.61	-0.5
3,184,294	-		Sama_2660	0.61	-1.1
3,184,294	-		Sama_2660	0.61	+0.5
3,184,294	-		Sama_2660	0.61	+1.3
3,184,294	-		Sama_2660	0.61	+0.3
3,184,300	-		Sama_2660	0.62	-1.1
3,184,300	-		Sama_2660	0.62	+1.1
3,184,313	-		Sama_2660	0.63	+1.0
3,184,369	+		Sama_2660	0.68	-0.5
3,184,369	+		Sama_2660	0.68	-0.0
3,184,370	-		Sama_2660	0.68	+0.0
3,184,370	-		Sama_2660	0.68	-0.2
3,184,370	-		Sama_2660	0.68	+0.6
3,184,394	+		Sama_2660	0.70	-0.6
3,184,394	+		Sama_2660	0.70	-0.2
3,184,394	+		Sama_2660	0.70	+1.6
3,184,394	+		Sama_2660	0.70	-0.8
3,184,394	+		Sama_2660	0.70	-0.8
3,184,394	+		Sama_2660	0.70	+0.0
3,184,394	+		Sama_2660	0.70	-0.2
3,184,394	+		Sama_2660	0.70	-0.8
3,184,394	+		Sama_2660	0.70	+0.9
3,184,394	+		Sama_2660	0.70	-0.3
3,184,394	+		Sama_2660	0.70	-0.3
3,184,395	-		Sama_2660	0.70	+0.8
3,184,395	-		Sama_2660	0.70	-1.0
3,184,395	-		Sama_2660	0.70	-1.2
3,184,395	-		Sama_2660	0.70	-1.5
3,184,395	-		Sama_2660	0.70	-1.1
3,184,395	-		Sama_2660	0.70	-0.8
3,184,395	-		Sama_2660	0.70	+0.3
3,184,395	-		Sama_2660	0.70	+0.2
3,184,395	-		Sama_2660	0.70	-1.0
3,184,396	+		Sama_2660	0.70	+1.3
3,184,396	+		Sama_2660	0.70	-0.0
3,184,396	+		Sama_2660	0.70	+0.2
3,184,396	+		Sama_2660	0.70	-0.1
3,184,396	+		Sama_2660	0.70	+0.7
3,184,396	+		Sama_2660	0.70	-1.4
3,184,396	+		Sama_2660	0.70	+0.8
3,184,397	-		Sama_2660	0.71	+0.7
3,184,397	-		Sama_2660	0.71	-1.2
3,184,397	-		Sama_2660	0.71	-2.1
3,184,397	-		Sama_2660	0.71	+0.6
3,184,428	+		Sama_2660	0.73	-0.7
3,184,429	-		Sama_2660	0.73	+0.5
3,184,530	+		Sama_2660	0.82	+0.2
3,184,530	+		Sama_2660	0.82	-0.7
3,184,530	+		Sama_2660	0.82	-1.2
3,184,530	+		Sama_2660	0.82	-2.2
3,184,530	+		Sama_2660	0.82	-1.0
3,184,530	+		Sama_2660	0.82	+0.2
3,184,530	+		Sama_2660	0.82	-0.1
3,184,530	+		Sama_2660	0.82	-1.4
3,184,530	+		Sama_2660	0.82	+0.7
3,184,530	+		Sama_2660	0.82	+2.1
3,184,531	-		Sama_2660	0.83	+1.1
3,184,531	-		Sama_2660	0.83	+0.2
3,184,531	-		Sama_2660	0.83	+0.2
3,184,531	-		Sama_2660	0.83	+0.2
3,184,531	-		Sama_2660	0.83	+0.3
3,184,531	-		Sama_2660	0.83	+0.3
3,184,531	-		Sama_2660	0.83	-0.8
3,184,531	-		Sama_2660	0.83	+0.9
3,184,531	-		Sama_2660	0.83	+0.3
3,184,531	-		Sama_2660	0.83	-0.2
3,184,535	+		Sama_2660	0.83	+0.2
3,184,535	+		Sama_2660	0.83	-0.2
3,184,535	+		Sama_2660	0.83	+0.4
3,184,535	+		Sama_2660	0.83	+0.1
3,184,536	-		Sama_2660	0.83	+0.5
3,184,536	-		Sama_2660	0.83	-1.5
3,184,536	-		Sama_2660	0.83	+1.7
3,184,536	-		Sama_2660	0.83	-0.2
3,184,536	-		Sama_2660	0.83	+0.1
3,184,590	-		Sama_2660	0.88	+0.1
3,184,610	+		Sama_2660	0.90	-0.5
3,184,610	+		Sama_2660	0.90	-0.2
3,184,610	+		Sama_2660	0.90	+0.9
3,184,610	+		Sama_2660	0.90	-0.1
3,184,610	+		Sama_2660	0.90	-0.5
3,184,611	-		Sama_2660	0.90	-0.5
3,184,611	-		Sama_2660	0.90	-0.7
3,184,611	-		Sama_2660	0.90	-0.6
3,184,614	+				-0.5
3,184,614	+				-0.5
3,184,614	+				-0.6
3,184,614	+				-0.6
3,184,614	+				+0.3
3,184,615	-				-1.0
3,184,615	-				-2.0
3,184,615	-				-1.0
3,184,615	-				-0.5
3,184,618	+				+0.5
3,184,618	+				-0.7
3,184,619	-				-1.6
3,184,619	-				+0.3
3,184,619	-				+0.6
3,184,619	-				-0.1
3,184,619	-				-0.2
3,184,619	-				-0.9
3,184,643	+				-2.6
3,184,644	-				-0.2
3,184,644	-				-0.8
3,184,728	+				+0.8
3,184,729	-				+2.4
3,184,729	-				-2.2
3,184,729	-				-0.4
3,184,729	-				+1.0
3,184,729	-				-0.2
3,184,729	-				+0.4
3,184,743	+				+0.2
3,184,747	-				+1.8
3,184,747	-				+0.6
3,184,803	+				+0.3
3,184,803	+				+0.6
3,184,803	+				-0.8
3,184,803	+				+0.5
3,184,809	-				+0.4
3,184,835	-				+2.5
3,184,835	-				+0.0
3,184,876	+		Sama_2661	0.11	-1.1
3,184,877	-		Sama_2661	0.11	+1.8
3,184,877	-		Sama_2661	0.11	+0.6
3,184,919	+		Sama_2661	0.13	-0.1
3,184,920	-		Sama_2661	0.14	+0.4
3,184,920	-		Sama_2661	0.14	+0.7
3,184,920	-		Sama_2661	0.14	-0.1
3,184,920	-		Sama_2661	0.14	-1.5
3,185,020	-		Sama_2661	0.20	+1.1
3,185,020	-		Sama_2661	0.20	+1.6
3,185,039	+		Sama_2661	0.22	-1.1
3,185,039	+		Sama_2661	0.22	-0.2
3,185,039	+		Sama_2661	0.22	-0.0
3,185,039	+		Sama_2661	0.22	-0.0
3,185,045	+		Sama_2661	0.22	-0.4
3,185,045	+		Sama_2661	0.22	+0.9
3,185,045	+		Sama_2661	0.22	-1.8
3,185,045	+		Sama_2661	0.22	+0.3
3,185,045	+		Sama_2661	0.22	-1.2
3,185,045	+		Sama_2661	0.22	-0.6
3,185,045	+		Sama_2661	0.22	-0.2
3,185,045	+		Sama_2661	0.22	-1.1
3,185,045	+		Sama_2661	0.22	-0.3
3,185,045	+		Sama_2661	0.22	-0.4
3,185,046	-		Sama_2661	0.22	-0.8
3,185,046	-		Sama_2661	0.22	+0.6
3,185,046	-		Sama_2661	0.22	-0.2
3,185,046	-		Sama_2661	0.22	-0.1
3,185,046	-		Sama_2661	0.22	-0.4
3,185,046	-		Sama_2661	0.22	-0.1
3,185,046	-		Sama_2661	0.22	+0.0
3,185,046	-		Sama_2661	0.22	+0.3
3,185,046	-		Sama_2661	0.22	+1.0
3,185,046	-		Sama_2661	0.22	+0.2
3,185,046	-		Sama_2661	0.22	-0.8
3,185,046	-		Sama_2661	0.22	+0.5
3,185,046	-		Sama_2661	0.22	+0.8
3,185,046	-		Sama_2661	0.22	-0.2
3,185,046	-		Sama_2661	0.22	+1.5
3,185,046	-		Sama_2661	0.22	+0.2
3,185,046	-		Sama_2661	0.22	+0.2
3,185,046	-		Sama_2661	0.22	-0.2
3,185,046	-		Sama_2661	0.22	+0.8
3,185,046	-		Sama_2661	0.22	+0.8
3,185,046	-		Sama_2661	0.22	-2.0
3,185,046	-		Sama_2661	0.22	+0.7
3,185,049	+		Sama_2661	0.22	+0.2
3,185,049	+		Sama_2661	0.22	-0.4
3,185,049	+		Sama_2661	0.22	-0.7
3,185,049	+		Sama_2661	0.22	-0.2
3,185,050	-		Sama_2661	0.22	-0.7
3,185,050	-		Sama_2661	0.22	-0.0
3,185,050	-		Sama_2661	0.22	-1.3
3,185,132	+		Sama_2661	0.28	+0.2
3,185,142	+		Sama_2661	0.29	-0.8
3,185,143	-		Sama_2661	0.29	+0.2
3,185,185	+		Sama_2661	0.32	-0.1
3,185,185	+		Sama_2661	0.32	-0.1
3,185,185	+		Sama_2661	0.32	-1.2
3,185,198	+		Sama_2661	0.33	-1.2
3,185,199	-		Sama_2661	0.33	+1.3
3,185,209	-		Sama_2661	0.33	+0.4
3,185,226	-		Sama_2661	0.35	-1.0
3,185,331	+		Sama_2661	0.42	+0.2
3,185,331	+		Sama_2661	0.42	-0.7
3,185,331	+		Sama_2661	0.42	-0.6
3,185,331	+		Sama_2661	0.42	-1.1
3,185,332	-		Sama_2661	0.42	-0.6
3,185,332	-		Sama_2661	0.42	-0.4
3,185,332	-		Sama_2661	0.42	+0.4
3,185,332	-		Sama_2661	0.42	-0.1
3,185,332	-		Sama_2661	0.42	+0.4
3,185,332	-		Sama_2661	0.42	+0.6
3,185,332	-		Sama_2661	0.42	-0.2
3,185,332	-		Sama_2661	0.42	+0.5
3,185,332	-		Sama_2661	0.42	-0.5
3,185,332	-		Sama_2661	0.42	-0.6
3,185,332	-		Sama_2661	0.42	+0.8
3,185,332	-		Sama_2661	0.42	-1.0
3,185,332	-		Sama_2661	0.42	-2.0
3,185,332	-		Sama_2661	0.42	-0.2
3,185,332	-		Sama_2661	0.42	-0.8
3,185,333	+		Sama_2661	0.42	-2.4
3,185,333	+		Sama_2661	0.42	-1.0
3,185,333	+		Sama_2661	0.42	+1.2
3,185,334	-		Sama_2661	0.42	+1.5
3,185,334	-		Sama_2661	0.42	+0.2
3,185,334	-		Sama_2661	0.42	+2.6
3,185,344	-		Sama_2661	0.43	-1.2
3,185,462	+		Sama_2661	0.51	-2.1
3,185,462	+		Sama_2661	0.51	-1.1
3,185,462	+		Sama_2661	0.51	-1.0
3,185,462	+		Sama_2661	0.51	-2.6
3,185,463	-		Sama_2661	0.51	-0.5
3,185,463	-		Sama_2661	0.51	-0.2
3,185,463	-		Sama_2661	0.51	-0.2
3,185,463	-		Sama_2661	0.51	-0.2
3,185,463	-		Sama_2661	0.51	+0.9
3,185,463	-		Sama_2661	0.51	-0.8
3,185,516	-		Sama_2661	0.55	-1.1
3,185,516	-		Sama_2661	0.55	+0.3
3,185,578	-		Sama_2661	0.59	-1.6
3,185,583	-		Sama_2661	0.59	-0.0
3,185,583	-		Sama_2661	0.59	+1.6
3,185,583	-		Sama_2661	0.59	+1.0
3,185,612	-		Sama_2661	0.61	+0.2
3,185,710	+		Sama_2661	0.68	-0.3
3,185,710	+		Sama_2661	0.68	-0.1
3,185,711	-		Sama_2661	0.68	-0.6
3,185,711	-		Sama_2661	0.68	-1.2
3,185,711	-		Sama_2661	0.68	+0.2
3,185,833	-		Sama_2661	0.76	-2.6
3,185,840	+		Sama_2661	0.77	+1.3
3,185,841	-		Sama_2661	0.77	-0.2
3,185,849	+		Sama_2661	0.77	+0.2
3,185,849	+		Sama_2661	0.77	-1.4
3,185,871	+		Sama_2661	0.79	-0.7
3,185,872	-		Sama_2661	0.79	+0.0
3,186,108	+				+0.0
3,186,109	-				-0.2
3,186,130	-				+0.1
3,186,179	-				-1.8
3,186,179	-				-0.2
3,186,205	-				-0.4
3,186,220	+				-0.2
3,186,220	+				-0.8
3,186,220	+				-0.6
3,186,220	+				+0.6
3,186,220	+				-1.3
3,186,221	-				+1.8
3,186,247	+				-1.3
3,186,286	+				-1.7
3,186,286	+				+0.1
3,186,288	+				-0.1
3,186,288	+				-1.8
3,186,288	+				-0.2
3,186,289	-				+0.3
3,186,289	-				-0.5
3,186,289	-				-0.0
3,186,292	+				+1.6
3,186,292	+				-2.2
3,186,292	+				-0.0
3,186,292	+				+0.0
3,186,292	+				+0.2
3,186,292	+				-0.2
3,186,292	+				-0.6
3,186,292	+				+0.0
3,186,292	+				-0.0
3,186,292	+				+0.3
3,186,292	+				+0.5
3,186,292	+				+2.0
3,186,292	+				+0.8
3,186,292	+				-1.0
3,186,292	+				-0.5
3,186,293	-				-1.7
3,186,293	-				-1.0
3,186,293	-				-1.6
3,186,293	-				-1.6
3,186,293	-				-1.8
3,186,293	-				+1.2
3,186,293	-				-0.5
3,186,293	-				-1.1
3,186,293	-				-1.3
3,186,293	-				+1.1
3,186,293	-				-0.2
3,186,293	-				+1.6
3,186,324	+				+0.9
3,186,423	+		Sama_2662	0.14	-0.7
3,186,424	-		Sama_2662	0.14	+0.5
3,186,483	+		Sama_2662	0.21	+0.5
3,186,484	-		Sama_2662	0.21	-0.4
3,186,484	-		Sama_2662	0.21	+0.4
3,186,484	-		Sama_2662	0.21	-0.1
3,186,484	-		Sama_2662	0.21	-1.2
3,186,484	-		Sama_2662	0.21	+0.3
3,186,488	-		Sama_2662	0.21	-0.6
3,186,493	+		Sama_2662	0.22	+0.1
3,186,494	-		Sama_2662	0.22	+0.1
3,186,504	-		Sama_2662	0.23	+0.7
3,186,603	+		Sama_2662	0.34	-0.9
3,186,687	+		Sama_2662	0.43	+0.4
3,186,715	+		Sama_2662	0.46	-0.7
3,186,725	+		Sama_2662	0.47	+0.2
3,186,726	-		Sama_2662	0.47	+1.1
3,186,766	+		Sama_2662	0.51	-1.6
3,186,900	-		Sama_2662	0.66	+0.8
3,186,954	+		Sama_2662	0.72	+0.7
3,186,954	+		Sama_2662	0.72	+0.4
3,186,954	+		Sama_2662	0.72	+0.2
3,186,954	+		Sama_2662	0.72	-0.1
3,186,954	+		Sama_2662	0.72	+0.4
3,186,954	+		Sama_2662	0.72	-0.4
3,186,954	+		Sama_2662	0.72	+0.5
3,186,954	+		Sama_2662	0.72	-1.8
3,186,954	+		Sama_2662	0.72	+0.2
3,186,954	+		Sama_2662	0.72	+1.0
3,186,954	+		Sama_2662	0.72	+0.3
3,186,955	-		Sama_2662	0.72	-0.1
3,186,955	-		Sama_2662	0.72	-0.3
3,186,955	-		Sama_2662	0.72	+0.9
3,186,956	+		Sama_2662	0.72	+0.8
3,186,956	+		Sama_2662	0.72	+0.1
3,186,956	+		Sama_2662	0.72	+0.6
3,186,956	+		Sama_2662	0.72	+1.0
3,186,956	+		Sama_2662	0.72	-0.7
3,186,956	+		Sama_2662	0.72	-1.1
3,186,956	+		Sama_2662	0.72	+0.5
3,186,957	-		Sama_2662	0.72	-0.3
3,186,957	-		Sama_2662	0.72	+1.2
3,186,957	-		Sama_2662	0.72	-0.8
3,186,957	-		Sama_2662	0.72	+0.1
3,186,957	-		Sama_2662	0.72	+0.6
3,186,957	-		Sama_2662	0.72	+0.3
3,186,957	-		Sama_2662	0.72	-1.1
3,186,957	-		Sama_2662	0.72	-0.3
3,186,957	-		Sama_2662	0.72	-1.2
3,186,957	-		Sama_2662	0.72	+0.0
3,186,957	-		Sama_2662	0.72	+1.2
3,186,958	+		Sama_2662	0.72	-1.8
3,186,958	+		Sama_2662	0.72	-0.4
3,186,958	+		Sama_2662	0.72	-1.3
3,186,958	+		Sama_2662	0.72	+0.4
3,186,958	+		Sama_2662	0.72	+0.8
3,186,958	+		Sama_2662	0.72	+0.5
3,186,959	-		Sama_2662	0.72	-0.1
3,186,959	-		Sama_2662	0.72	-1.5
3,186,959	-		Sama_2662	0.72	-1.0
3,186,959	-		Sama_2662	0.72	+0.1
3,186,959	-		Sama_2662	0.72	-0.4
3,186,959	-		Sama_2662	0.72	+2.1
3,186,959	-		Sama_2662	0.72	-0.3
3,186,959	-		Sama_2662	0.72	-1.0
3,187,021	-		Sama_2662	0.79	+1.0
3,187,033	+		Sama_2662	0.80	-0.0
3,187,051	+		Sama_2662	0.82	+0.1
3,187,051	+		Sama_2662	0.82	-0.2
3,187,052	-		Sama_2662	0.82	+1.0
3,187,052	-		Sama_2662	0.82	-2.0
3,187,052	-		Sama_2662	0.82	-2.7
3,187,052	-		Sama_2662	0.82	+0.9
3,187,052	-		Sama_2662	0.82	+1.8
3,187,060	-		Sama_2662	0.83	-1.1
3,187,060	-		Sama_2662	0.83	+0.6
3,187,060	-		Sama_2662	0.83	+0.8
3,187,149	+				-1.3
3,187,149	+				-0.6
3,187,158	-				+0.2
3,187,158	-				-1.0
3,187,158	-				-0.1
3,187,158	-				-1.1