Strain Fitness in Shewanella amazonensis SB2B around Sama_2236

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
2,699,090	+				+1.2
2,699,156	+		Sama_2235	0.12	+0.3
2,699,156	+		Sama_2235	0.12	+0.8
2,699,156	+		Sama_2235	0.12	+1.6
2,699,227	+		Sama_2235	0.19	+0.2
2,699,243	+		Sama_2235	0.20	-0.0
2,699,244	-		Sama_2235	0.20	+0.3
2,699,357	+		Sama_2235	0.32	+0.4
2,699,358	-		Sama_2235	0.32	-1.5
2,699,361	-		Sama_2235	0.32	+1.2
2,699,374	+		Sama_2235	0.33	+1.1
2,699,375	-		Sama_2235	0.33	+0.6
2,699,405	-		Sama_2235	0.36	+0.6
2,699,417	-		Sama_2235	0.38	+0.3
2,699,496	+		Sama_2235	0.45	-0.6
2,699,497	-		Sama_2235	0.46	+0.8
2,699,503	+		Sama_2235	0.46	+1.9
2,699,547	+		Sama_2235	0.51	+0.7
2,699,547	+		Sama_2235	0.51	+0.6
2,699,547	+		Sama_2235	0.51	-0.2
2,699,547	+		Sama_2235	0.51	+0.6
2,699,547	+		Sama_2235	0.51	-0.1
2,699,548	-		Sama_2235	0.51	-0.0
2,699,548	-		Sama_2235	0.51	+1.3
2,699,589	+		Sama_2235	0.55	+0.4
2,699,589	+		Sama_2235	0.55	+0.3
2,699,609	+		Sama_2235	0.57	+1.1
2,699,673	+		Sama_2235	0.63	-1.4
2,699,674	-		Sama_2235	0.63	-0.4
2,699,674	-		Sama_2235	0.63	-0.5
2,699,688	-		Sama_2235	0.65	+1.1
2,699,717	-		Sama_2235	0.67	+0.8
2,699,748	+		Sama_2235	0.71	-1.4
2,699,773	-		Sama_2235	0.73	+1.3
2,699,820	-		Sama_2235	0.78	-0.4
2,699,820	-		Sama_2235	0.78	-0.0
2,699,820	-		Sama_2235	0.78	+1.3
2,699,820	-		Sama_2235	0.78	-0.4
2,699,934	+		Sama_2235	0.89	+0.6
2,699,934	+		Sama_2235	0.89	+1.1
2,699,935	-		Sama_2235	0.89	-1.1
2,699,935	-		Sama_2235	0.89	+0.5
2,699,935	-		Sama_2235	0.89	-1.1
2,699,935	-		Sama_2235	0.89	+1.2
2,699,935	-		Sama_2235	0.89	+0.5
2,699,935	-		Sama_2235	0.89	+0.7
2,700,036	-				+1.5
2,700,057	+				-0.1
2,700,058	-				+1.8
2,700,058	-				+0.4
2,700,067	+				+1.1
2,700,068	-				+0.6
2,700,068	-				-0.0
2,700,077	+				-1.4
2,700,078	-				+0.9
2,700,078	-				-0.1
2,700,078	-				+0.7
2,700,089	-				-0.3
2,700,090	+				+0.9
2,700,091	-				-0.2
2,700,091	-				+0.6
2,700,135	-				+0.9
2,700,135	-				+1.0
2,700,135	-				-1.0
2,700,140	-				+0.4
2,700,140	-				+3.8
2,700,142	+				+0.5
2,700,142	+				-1.0
2,700,142	+				-0.0
2,700,142	+				-0.2
2,700,234	-		Sama_2236	0.11	+2.7
2,700,295	-		Sama_2236	0.16	-1.6
2,700,295	-		Sama_2236	0.16	+0.7
2,700,312	-		Sama_2236	0.17	+0.9
2,700,312	-		Sama_2236	0.17	+0.2
2,700,323	+		Sama_2236	0.18	-0.8
2,700,324	-		Sama_2236	0.18	-1.4
2,700,324	-		Sama_2236	0.18	+1.4
2,700,447	-		Sama_2236	0.27	+1.0
2,700,447	-		Sama_2236	0.27	-1.4
2,700,447	-		Sama_2236	0.27	+0.3
2,700,538	-		Sama_2236	0.33	+0.4
2,700,538	-		Sama_2236	0.33	+1.2
2,700,560	+		Sama_2236	0.35	-0.4
2,700,560	+		Sama_2236	0.35	+1.1
2,700,561	-		Sama_2236	0.35	+0.4
2,700,629	+		Sama_2236	0.40	+0.9
2,700,630	-		Sama_2236	0.40	+0.2
2,700,674	-		Sama_2236	0.43	-0.5
2,700,677	+		Sama_2236	0.44	-0.5
2,700,677	+		Sama_2236	0.44	-0.9
2,700,678	-		Sama_2236	0.44	+0.6
2,700,678	-		Sama_2236	0.44	+1.2
2,700,678	-		Sama_2236	0.44	+1.4
2,700,678	-		Sama_2236	0.44	-0.1
2,700,716	+		Sama_2236	0.47	-0.5
2,700,755	+		Sama_2236	0.49	-0.2
2,700,811	+		Sama_2236	0.53	-2.5
2,700,812	-		Sama_2236	0.54	+0.7
2,700,880	+		Sama_2236	0.59	+0.7
2,700,929	+		Sama_2236	0.62	+0.6
2,700,930	-		Sama_2236	0.62	-0.3
2,700,989	+		Sama_2236	0.67	+0.2
2,701,010	+		Sama_2236	0.68	-0.4
2,701,010	+		Sama_2236	0.68	+2.5
2,701,011	-		Sama_2236	0.68	+0.1
2,701,279	-		Sama_2236	0.88	+2.8
2,701,304	-		Sama_2236	0.90	+0.6
2,701,350	+				+0.2
2,701,350	+				-0.4
2,701,350	+				+0.6
2,701,351	-				-0.4
2,701,351	-				-0.7
2,701,351	-				-1.9
2,701,357	-				+0.4
2,701,357	-				-0.6
2,701,359	-				+0.7
2,701,359	-				+0.8
2,701,359	-				+0.3
2,701,359	-				-0.9
2,701,359	-				-0.3
2,701,414	+				+0.2
2,701,414	+				+0.3
2,701,414	+				+0.7
2,701,414	+				+0.3
2,701,414	+				+1.3
2,701,414	+				+0.7
2,701,415	-				-0.5
2,701,415	-				-0.4
2,701,415	-				+2.8
2,701,415	-				+1.2
2,701,465	+				-0.9
2,701,465	+				-0.8
2,701,466	-				+1.0
2,701,471	+				-0.2
2,701,471	+				-0.7
2,701,501	-				-0.2
2,701,501	-				-0.9
2,701,501	-				-0.6
2,701,550	+				-1.3
2,701,551	-				+1.8
2,701,551	-				+0.9
2,701,560	+				+0.2
2,701,560	+				+0.3
2,701,560	+				+0.7
2,701,561	-				-0.5
2,702,080	-				+0.1
2,702,080	-				+0.4
2,702,080	-				-0.4
2,702,080	-				+2.1
2,702,098	-		Sama_2238	0.13	+1.5
2,702,105	+		Sama_2238	0.16	+0.1
2,702,129	+		Sama_2238	0.26	-0.1
2,702,181	+		Sama_2238	0.48	+1.9
2,702,181	+		Sama_2238	0.48	-0.8
2,702,181	+		Sama_2238	0.48	+0.4
2,702,190	+		Sama_2238	0.52	+1.2
2,702,190	+		Sama_2238	0.52	+1.3
2,702,190	+		Sama_2238	0.52	-0.1
2,702,190	+		Sama_2238	0.52	+0.6
2,702,191	-		Sama_2238	0.52	-1.0
2,702,191	-		Sama_2238	0.52	+0.6
2,702,194	+		Sama_2238	0.54	-1.3
2,702,194	+		Sama_2238	0.54	+0.4
2,702,194	+		Sama_2238	0.54	-0.2
2,702,194	+		Sama_2238	0.54	-0.8
2,702,195	-		Sama_2238	0.54	+1.5
2,702,205	+		Sama_2238	0.58	-0.3
2,702,211	-		Sama_2238	0.61	-0.1
2,702,211	-		Sama_2238	0.61	-0.2
2,702,211	-		Sama_2238	0.61	+1.1
2,702,285	+				-0.1
2,702,290	+				-1.3
2,702,291	-				+0.9
2,702,291	-				-0.5
2,702,291	-				+0.8
2,702,294	+				+1.0
2,702,294	+				-1.7
2,702,294	+				+0.8
2,702,294	+				-1.8
2,702,294	+				-0.1
2,702,294	+				+0.9
2,702,295	-				-0.3
2,702,295	-				+2.0
2,702,295	-				+0.6
2,702,295	-				-0.1
2,702,295	-				-2.0
2,702,346	+				-0.3
2,702,371	-				-1.4
2,702,371	-				-0.4
2,702,371	-				-0.6
2,702,386	+				+0.2
2,702,386	+				-1.0
2,702,386	+				-0.2
2,702,387	-				+2.0
2,702,387	-				+0.6
2,702,387	-				-1.3
2,702,387	-				-2.0
2,702,387	-				+1.9
2,702,429	+				+1.6
2,702,430	-				+0.4