Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3841 and HP15_3842 are separated by 7 nucleotides HP15_3842 and HP15_3843 are separated by 193 nucleotides
HP15_3841: HP15_3841 - iron(III) ABC transporter permease protein, at 4,066,635 to 4,068,347
_3841
HP15_3842: HP15_3842 - iron(III) ABC transporter, ATP-binding protein, at 4,068,355 to 4,069,470
_3842
HP15_3843: HP15_3843 - iron(III) ABC transporter, periplasmic iron-compound-binding protein, at 4,069,664 to 4,070,686
_3843
Position (kb)
4068
4069
4070 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4067.356 kb on - strand, within HP15_3841 at 4067.364 kb on + strand, within HP15_3841 at 4067.400 kb on - strand, within HP15_3841 at 4067.516 kb on + strand, within HP15_3841 at 4067.516 kb on + strand, within HP15_3841 at 4067.524 kb on - strand, within HP15_3841 at 4067.555 kb on + strand, within HP15_3841 at 4067.615 kb on - strand, within HP15_3841 at 4067.869 kb on - strand, within HP15_3841 at 4067.869 kb on - strand, within HP15_3841 at 4067.941 kb on + strand, within HP15_3841 at 4067.959 kb on - strand, within HP15_3841 at 4067.959 kb on - strand, within HP15_3841 at 4068.005 kb on - strand, within HP15_3841 at 4068.017 kb on + strand, within HP15_3841 at 4068.018 kb on + strand, within HP15_3841 at 4068.112 kb on - strand, within HP15_3841 at 4068.140 kb on - strand, within HP15_3841 at 4068.257 kb on - strand at 4068.520 kb on + strand, within HP15_3842 at 4068.528 kb on - strand, within HP15_3842 at 4068.608 kb on + strand, within HP15_3842 at 4068.632 kb on + strand, within HP15_3842 at 4068.667 kb on + strand, within HP15_3842 at 4068.670 kb on + strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.689 kb on + strand, within HP15_3842 at 4068.697 kb on - strand, within HP15_3842 at 4068.745 kb on + strand, within HP15_3842 at 4068.779 kb on + strand, within HP15_3842 at 4068.837 kb on + strand, within HP15_3842 at 4068.856 kb on - strand, within HP15_3842 at 4068.884 kb on - strand, within HP15_3842 at 4068.970 kb on + strand, within HP15_3842 at 4068.970 kb on + strand, within HP15_3842 at 4068.983 kb on - strand, within HP15_3842 at 4069.056 kb on - strand, within HP15_3842 at 4069.056 kb on - strand, within HP15_3842 at 4069.106 kb on + strand, within HP15_3842 at 4069.117 kb on + strand, within HP15_3842 at 4069.209 kb on - strand, within HP15_3842 at 4069.220 kb on - strand, within HP15_3842 at 4069.947 kb on + strand, within HP15_3843 at 4069.970 kb on + strand, within HP15_3843 at 4069.978 kb on - strand, within HP15_3843 at 4069.978 kb on - strand, within HP15_3843 at 4070.013 kb on + strand, within HP15_3843 at 4070.033 kb on - strand, within HP15_3843 at 4070.033 kb on - strand, within HP15_3843 at 4070.104 kb on + strand, within HP15_3843 at 4070.110 kb on + strand, within HP15_3843 at 4070.140 kb on + strand, within HP15_3843 at 4070.176 kb on - strand, within HP15_3843 at 4070.224 kb on + strand, within HP15_3843 at 4070.251 kb on + strand, within HP15_3843 at 4070.254 kb on + strand, within HP15_3843 at 4070.270 kb on + strand, within HP15_3843 at 4070.270 kb on + strand, within HP15_3843 at 4070.297 kb on + strand, within HP15_3843 at 4070.329 kb on - strand, within HP15_3843 at 4070.341 kb on + strand, within HP15_3843 at 4070.355 kb on + strand, within HP15_3843 at 4070.384 kb on - strand, within HP15_3843 at 4070.412 kb on + strand, within HP15_3843
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 4,067,356 - HP15_3841 0.42 +0.9 4,067,364 + HP15_3841 0.43 +1.3 4,067,400 - HP15_3841 0.45 +1.3 4,067,516 + HP15_3841 0.51 +1.3 4,067,516 + HP15_3841 0.51 +0.9 4,067,524 - HP15_3841 0.52 +0.8 4,067,555 + HP15_3841 0.54 +1.9 4,067,615 - HP15_3841 0.57 +2.1 4,067,869 - HP15_3841 0.72 +0.9 4,067,869 - HP15_3841 0.72 +1.3 4,067,941 + HP15_3841 0.76 +1.2 4,067,959 - HP15_3841 0.77 +2.8 4,067,959 - HP15_3841 0.77 +0.3 4,068,005 - HP15_3841 0.80 +1.3 4,068,017 + HP15_3841 0.81 +1.2 4,068,018 + HP15_3841 0.81 +2.7 4,068,112 - HP15_3841 0.86 -0.4 4,068,140 - HP15_3841 0.88 +2.2 4,068,257 - +1.2 4,068,520 + HP15_3842 0.15 +0.1 4,068,528 - HP15_3842 0.16 +0.9 4,068,608 + HP15_3842 0.23 +0.7 4,068,632 + HP15_3842 0.25 -0.0 4,068,667 + HP15_3842 0.28 +0.2 4,068,670 + HP15_3842 0.28 +0.7 4,068,675 - HP15_3842 0.29 -0.2 4,068,675 - HP15_3842 0.29 -1.3 4,068,675 - HP15_3842 0.29 +0.7 4,068,689 + HP15_3842 0.30 -0.4 4,068,697 - HP15_3842 0.31 +0.3 4,068,745 + HP15_3842 0.35 +0.5 4,068,779 + HP15_3842 0.38 +1.3 4,068,837 + HP15_3842 0.43 +0.8 4,068,856 - HP15_3842 0.45 -0.3 4,068,884 - HP15_3842 0.47 -0.1 4,068,970 + HP15_3842 0.55 -0.2 4,068,970 + HP15_3842 0.55 -0.9 4,068,983 - HP15_3842 0.56 +0.0 4,069,056 - HP15_3842 0.63 +1.0 4,069,056 - HP15_3842 0.63 +0.7 4,069,106 + HP15_3842 0.67 -0.3 4,069,117 + HP15_3842 0.68 +0.4 4,069,209 - HP15_3842 0.77 +1.4 4,069,220 - HP15_3842 0.78 +0.4 4,069,947 + HP15_3843 0.28 +1.2 4,069,970 + HP15_3843 0.30 +1.3 4,069,978 - HP15_3843 0.31 +1.7 4,069,978 - HP15_3843 0.31 +1.0 4,070,013 + HP15_3843 0.34 +0.8 4,070,033 - HP15_3843 0.36 +3.2 4,070,033 - HP15_3843 0.36 +1.5 4,070,104 + HP15_3843 0.43 +1.4 4,070,110 + HP15_3843 0.44 +1.3 4,070,140 + HP15_3843 0.47 -0.8 4,070,176 - HP15_3843 0.50 +3.5 4,070,224 + HP15_3843 0.55 +0.5 4,070,251 + HP15_3843 0.57 +1.7 4,070,254 + HP15_3843 0.58 +3.5 4,070,270 + HP15_3843 0.59 +1.1 4,070,270 + HP15_3843 0.59 +0.1 4,070,297 + HP15_3843 0.62 +0.9 4,070,329 - HP15_3843 0.65 +2.3 4,070,341 + HP15_3843 0.66 +0.7 4,070,355 + HP15_3843 0.68 -0.2 4,070,384 - HP15_3843 0.70 +1.4 4,070,412 + HP15_3843 0.73 +1.5
Or see this region's nucleotide sequence