Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2105 and HP15_2106 are separated by 9 nucleotides HP15_2106 and HP15_2107 are separated by 220 nucleotides
HP15_2105: HP15_2105 - response regulator receiver domain protein (CheY-), at 2,204,000 to 2,205,841
_2105
HP15_2106: HP15_2106 - conserved hypothetical protein, at 2,205,851 to 2,206,492
_2106
HP15_2107: HP15_2107 - cytochrome c oxidase, cbb3-type, subunit I, at 2,206,713 to 2,208,143
_2107
Position (kb)
2205
2206
2207 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2204.893 kb on - strand, within HP15_2105 at 2204.916 kb on + strand, within HP15_2105 at 2204.984 kb on - strand, within HP15_2105 at 2205.011 kb on + strand, within HP15_2105 at 2205.076 kb on + strand, within HP15_2105 at 2205.084 kb on - strand, within HP15_2105 at 2205.084 kb on - strand, within HP15_2105 at 2205.112 kb on - strand, within HP15_2105 at 2205.141 kb on - strand, within HP15_2105 at 2205.152 kb on + strand, within HP15_2105 at 2205.182 kb on + strand, within HP15_2105 at 2205.211 kb on + strand, within HP15_2105 at 2205.321 kb on - strand, within HP15_2105 at 2205.407 kb on + strand, within HP15_2105 at 2205.432 kb on + strand, within HP15_2105 at 2205.440 kb on - strand, within HP15_2105 at 2205.440 kb on - strand, within HP15_2105 at 2205.450 kb on - strand, within HP15_2105 at 2205.482 kb on + strand, within HP15_2105 at 2205.512 kb on - strand, within HP15_2105 at 2205.514 kb on - strand, within HP15_2105 at 2205.675 kb on + strand at 2205.683 kb on - strand at 2205.748 kb on - strand at 2205.773 kb on + strand at 2205.773 kb on + strand at 2205.781 kb on - strand at 2205.781 kb on - strand at 2205.781 kb on - strand at 2205.825 kb on - strand at 2205.825 kb on - strand at 2205.846 kb on - strand at 2205.880 kb on - strand at 2206.059 kb on + strand, within HP15_2106 at 2206.208 kb on + strand, within HP15_2106 at 2206.210 kb on + strand, within HP15_2106 at 2206.243 kb on - strand, within HP15_2106 at 2206.530 kb on - strand at 2206.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 2,204,893 - HP15_2105 0.48 -1.7 2,204,916 + HP15_2105 0.50 +0.6 2,204,984 - HP15_2105 0.53 -0.7 2,205,011 + HP15_2105 0.55 -0.4 2,205,076 + HP15_2105 0.58 -0.5 2,205,084 - HP15_2105 0.59 -0.8 2,205,084 - HP15_2105 0.59 +1.0 2,205,112 - HP15_2105 0.60 -0.9 2,205,141 - HP15_2105 0.62 -1.2 2,205,152 + HP15_2105 0.63 -0.4 2,205,182 + HP15_2105 0.64 -0.1 2,205,211 + HP15_2105 0.66 +0.3 2,205,321 - HP15_2105 0.72 -1.5 2,205,407 + HP15_2105 0.76 +0.3 2,205,432 + HP15_2105 0.78 +0.3 2,205,440 - HP15_2105 0.78 +1.1 2,205,440 - HP15_2105 0.78 -0.5 2,205,450 - HP15_2105 0.79 +1.1 2,205,482 + HP15_2105 0.80 +0.5 2,205,512 - HP15_2105 0.82 -0.4 2,205,514 - HP15_2105 0.82 +1.1 2,205,675 + +2.6 2,205,683 - +0.9 2,205,748 - -0.9 2,205,773 + -2.9 2,205,773 + +0.1 2,205,781 - +0.5 2,205,781 - -0.2 2,205,781 - +0.1 2,205,825 - +0.3 2,205,825 - +0.6 2,205,846 - -0.4 2,205,880 - +0.2 2,206,059 + HP15_2106 0.32 +1.1 2,206,208 + HP15_2106 0.56 -0.5 2,206,210 + HP15_2106 0.56 -2.9 2,206,243 - HP15_2106 0.61 -1.1 2,206,530 - -0.8 2,206,634 - -0.6
Or see this region's nucleotide sequence