Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1864 and HP15_1865 are separated by 194 nucleotides HP15_1865 and HP15_1866 are separated by 47 nucleotides
HP15_1864: HP15_1864 - acyl-CoA synthase, at 1,969,999 to 1,971,681
_1864
HP15_1865: HP15_1865 - MaoC domain protein dehydratase, at 1,971,876 to 1,972,361
_1865
HP15_1866: HP15_1866 - conserved hypothetical protein, at 1,972,409 to 1,973,308
_1866
Position (kb)
1971
1972
1973 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1970.925 kb on - strand, within HP15_1864 at 1970.997 kb on - strand, within HP15_1864 at 1971.352 kb on - strand, within HP15_1864 at 1971.370 kb on + strand, within HP15_1864 at 1971.378 kb on - strand, within HP15_1864 at 1971.437 kb on + strand, within HP15_1864 at 1971.460 kb on - strand, within HP15_1864 at 1971.610 kb on + strand at 1971.824 kb on - strand at 1971.852 kb on + strand at 1971.854 kb on + strand at 1971.880 kb on + strand at 1971.890 kb on + strand at 1971.955 kb on + strand, within HP15_1865 at 1971.955 kb on + strand, within HP15_1865 at 1971.963 kb on - strand, within HP15_1865 at 1971.963 kb on - strand, within HP15_1865 at 1971.963 kb on - strand, within HP15_1865 at 1971.963 kb on - strand, within HP15_1865 at 1971.980 kb on + strand, within HP15_1865 at 1972.076 kb on - strand, within HP15_1865 at 1972.140 kb on + strand, within HP15_1865 at 1972.143 kb on - strand, within HP15_1865 at 1972.520 kb on + strand, within HP15_1866 at 1972.590 kb on + strand, within HP15_1866 at 1972.711 kb on - strand, within HP15_1866 at 1972.775 kb on - strand, within HP15_1866 at 1972.865 kb on - strand, within HP15_1866 at 1972.926 kb on + strand, within HP15_1866 at 1973.112 kb on - strand, within HP15_1866 at 1973.215 kb on + strand, within HP15_1866 at 1973.289 kb on + strand at 1973.347 kb on + strand at 1973.347 kb on + strand at 1973.347 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 1,970,925 - HP15_1864 0.55 +0.0 1,970,997 - HP15_1864 0.59 +1.3 1,971,352 - HP15_1864 0.80 +1.0 1,971,370 + HP15_1864 0.81 +1.1 1,971,378 - HP15_1864 0.82 +1.8 1,971,437 + HP15_1864 0.85 -1.4 1,971,460 - HP15_1864 0.87 +0.6 1,971,610 + +1.5 1,971,824 - -0.1 1,971,852 + -1.5 1,971,854 + +1.6 1,971,880 + +0.4 1,971,890 + -0.7 1,971,955 + HP15_1865 0.16 -1.4 1,971,955 + HP15_1865 0.16 -0.7 1,971,963 - HP15_1865 0.18 -0.5 1,971,963 - HP15_1865 0.18 -1.9 1,971,963 - HP15_1865 0.18 -2.3 1,971,963 - HP15_1865 0.18 +0.4 1,971,980 + HP15_1865 0.21 -1.5 1,972,076 - HP15_1865 0.41 -0.4 1,972,140 + HP15_1865 0.54 -1.0 1,972,143 - HP15_1865 0.55 -0.9 1,972,520 + HP15_1866 0.12 -1.1 1,972,590 + HP15_1866 0.20 -0.9 1,972,711 - HP15_1866 0.34 -1.6 1,972,775 - HP15_1866 0.41 -1.1 1,972,865 - HP15_1866 0.51 +1.6 1,972,926 + HP15_1866 0.57 +0.5 1,973,112 - HP15_1866 0.78 -0.2 1,973,215 + HP15_1866 0.90 +1.0 1,973,289 + -0.1 1,973,347 + -1.0 1,973,347 + +0.3 1,973,347 + +0.1
Or see this region's nucleotide sequence