Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1569 and HP15_1570 are separated by 582 nucleotides HP15_1570 and HP15_1571 are separated by 2 nucleotides HP15_1571 and HP15_1572 overlap by 4 nucleotides
HP15_1569: HP15_1569 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase, at 1,649,493 to 1,650,071
_1569
HP15_1570: HP15_1570 - mammalian cell entry related domain protein, at 1,650,654 to 1,651,592
_1570
HP15_1571: HP15_1571 - ATP-binding component of ABC transporter, at 1,651,595 to 1,652,434
_1571
HP15_1572: HP15_1572 - ABC transporter, permease protein, at 1,652,431 to 1,653,597
_1572
Position (kb)
1650
1651
1652 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1650.070 kb on + strand at 1650.073 kb on - strand at 1650.120 kb on - strand at 1650.140 kb on + strand at 1650.192 kb on + strand at 1650.199 kb on - strand at 1650.286 kb on + strand at 1650.359 kb on + strand at 1650.373 kb on + strand at 1650.397 kb on - strand at 1650.422 kb on + strand at 1650.557 kb on - strand at 1650.604 kb on + strand at 1650.604 kb on + strand at 1650.609 kb on + strand at 1650.746 kb on + strand at 1650.761 kb on + strand, within HP15_1570 at 1650.790 kb on - strand, within HP15_1570 at 1650.848 kb on + strand, within HP15_1570 at 1650.853 kb on + strand, within HP15_1570 at 1651.006 kb on + strand, within HP15_1570 at 1651.116 kb on + strand, within HP15_1570 at 1651.116 kb on + strand, within HP15_1570 at 1651.257 kb on - strand, within HP15_1570 at 1651.384 kb on + strand, within HP15_1570 at 1651.432 kb on + strand, within HP15_1570 at 1651.440 kb on - strand, within HP15_1570 at 1651.571 kb on + strand at 1651.671 kb on - strand at 1651.739 kb on - strand, within HP15_1571 at 1651.786 kb on + strand, within HP15_1571 at 1651.794 kb on - strand, within HP15_1571 at 1651.794 kb on - strand, within HP15_1571 at 1651.823 kb on + strand, within HP15_1571 at 1651.876 kb on + strand, within HP15_1571 at 1652.016 kb on + strand, within HP15_1571 at 1652.106 kb on + strand, within HP15_1571 at 1652.129 kb on + strand, within HP15_1571 at 1652.152 kb on - strand, within HP15_1571 at 1652.152 kb on - strand, within HP15_1571 at 1652.327 kb on + strand, within HP15_1571 at 1652.460 kb on - strand at 1652.494 kb on + strand at 1652.523 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 1,650,070 + +0.4 1,650,073 - -0.6 1,650,120 - -0.0 1,650,140 + +0.2 1,650,192 + +3.7 1,650,199 - -0.7 1,650,286 + -1.4 1,650,359 + -0.0 1,650,373 + +1.6 1,650,397 - +0.8 1,650,422 + +0.2 1,650,557 - +0.7 1,650,604 + +0.6 1,650,604 + -0.0 1,650,609 + -2.0 1,650,746 + -0.6 1,650,761 + HP15_1570 0.11 +1.6 1,650,790 - HP15_1570 0.14 +0.4 1,650,848 + HP15_1570 0.21 -0.9 1,650,853 + HP15_1570 0.21 -0.5 1,651,006 + HP15_1570 0.37 -0.3 1,651,116 + HP15_1570 0.49 +0.7 1,651,116 + HP15_1570 0.49 -1.1 1,651,257 - HP15_1570 0.64 +0.6 1,651,384 + HP15_1570 0.78 +0.8 1,651,432 + HP15_1570 0.83 +0.2 1,651,440 - HP15_1570 0.84 +1.2 1,651,571 + -2.6 1,651,671 - -0.9 1,651,739 - HP15_1571 0.17 -1.0 1,651,786 + HP15_1571 0.23 -0.1 1,651,794 - HP15_1571 0.24 -1.5 1,651,794 - HP15_1571 0.24 +2.9 1,651,823 + HP15_1571 0.27 +0.4 1,651,876 + HP15_1571 0.33 -1.6 1,652,016 + HP15_1571 0.50 -0.2 1,652,106 + HP15_1571 0.61 -1.2 1,652,129 + HP15_1571 0.64 -0.0 1,652,152 - HP15_1571 0.66 -0.1 1,652,152 - HP15_1571 0.66 +1.9 1,652,327 + HP15_1571 0.87 +2.9 1,652,460 - +0.2 1,652,494 + +1.6 1,652,523 + -2.0
Or see this region's nucleotide sequence