Strain Fitness in Shewanella amazonensis SB2B around Sama_3283

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,899,815	+		Sama_3282	0.50	-1.7
3,899,919	+		Sama_3282	0.57	-0.5
3,899,920	-		Sama_3282	0.57	-4.1
3,899,943	+		Sama_3282	0.58	-2.3
3,899,943	+		Sama_3282	0.58	-3.6
3,899,943	+		Sama_3282	0.58	-2.3
3,899,943	+		Sama_3282	0.58	-4.0
3,899,943	+		Sama_3282	0.58	-1.4
3,899,943	+		Sama_3282	0.58	-2.3
3,899,944	-		Sama_3282	0.58	-1.5
3,899,944	-		Sama_3282	0.58	-2.7
3,899,944	-		Sama_3282	0.58	-1.3
3,899,944	-		Sama_3282	0.58	-1.7
3,899,944	-		Sama_3282	0.58	-3.5
3,899,944	-		Sama_3282	0.58	-2.0
3,899,944	-		Sama_3282	0.58	-2.6
3,899,944	-		Sama_3282	0.58	-2.4
3,899,944	-		Sama_3282	0.58	-3.7
3,899,944	-		Sama_3282	0.58	-3.3
3,899,946	+		Sama_3282	0.59	-2.0
3,899,947	-		Sama_3282	0.59	-3.6
3,899,947	-		Sama_3282	0.59	-2.4
3,899,981	-		Sama_3282	0.61	-2.4
3,899,981	-		Sama_3282	0.61	-1.7
3,899,997	+		Sama_3282	0.62	-4.4
3,899,997	+		Sama_3282	0.62	-3.0
3,899,998	-		Sama_3282	0.62	-3.4
3,900,048	+		Sama_3282	0.65	-2.7
3,900,048	+		Sama_3282	0.65	-3.7
3,900,048	+		Sama_3282	0.65	-3.9
3,900,049	-		Sama_3282	0.65	-3.1
3,900,067	+		Sama_3282	0.67	-2.7
3,900,067	+		Sama_3282	0.67	-1.4
3,900,067	+		Sama_3282	0.67	-1.0
3,900,068	-		Sama_3282	0.67	-2.0
3,900,068	-		Sama_3282	0.67	-3.1
3,900,123	-		Sama_3282	0.70	-3.6
3,900,153	+		Sama_3282	0.72	-4.2
3,900,153	+		Sama_3282	0.72	-2.3
3,900,153	+		Sama_3282	0.72	-2.8
3,900,153	+		Sama_3282	0.72	-2.8
3,900,153	+		Sama_3282	0.72	-0.8
3,900,153	+		Sama_3282	0.72	-2.3
3,900,153	+		Sama_3282	0.72	-1.4
3,900,153	+		Sama_3282	0.72	-3.9
3,900,153	+		Sama_3282	0.72	-1.5
3,900,153	+		Sama_3282	0.72	-1.7
3,900,154	-		Sama_3282	0.73	-2.7
3,900,154	-		Sama_3282	0.73	-2.5
3,900,154	-		Sama_3282	0.73	-1.3
3,900,154	-		Sama_3282	0.73	-0.8
3,900,172	+		Sama_3282	0.74	-4.3
3,900,172	+		Sama_3282	0.74	-3.5
3,900,173	-		Sama_3282	0.74	-0.8
3,900,173	-		Sama_3282	0.74	-2.3
3,900,173	-		Sama_3282	0.74	-2.0
3,900,207	+		Sama_3282	0.76	-4.1
3,900,208	-		Sama_3282	0.76	-3.5
3,900,256	-		Sama_3282	0.79	-3.2
3,900,256	-		Sama_3282	0.79	-3.8
3,900,290	+		Sama_3282	0.82	-4.8
3,900,290	+		Sama_3282	0.82	-1.8
3,900,291	-		Sama_3282	0.82	-4.4
3,900,291	-		Sama_3282	0.82	-4.2
3,900,294	+		Sama_3282	0.82	-4.1
3,900,295	-		Sama_3282	0.82	-3.3
3,900,295	-		Sama_3282	0.82	-1.8
3,900,295	-		Sama_3282	0.82	-1.7
3,900,299	+		Sama_3282	0.82	-3.0
3,900,367	+		Sama_3282	0.87	-3.1
3,900,367	+		Sama_3282	0.87	-4.8
3,900,368	-		Sama_3282	0.87	-4.2
3,900,368	-		Sama_3282	0.87	-3.1
3,900,368	-		Sama_3282	0.87	-5.1
3,900,374	+		Sama_3282	0.87	-2.8
3,900,375	-		Sama_3282	0.87	-1.1
3,900,375	-		Sama_3282	0.87	-1.6
3,900,375	-		Sama_3282	0.87	-3.3
3,900,375	-		Sama_3282	0.87	-0.5
3,900,375	-		Sama_3282	0.87	-3.0
3,900,375	-		Sama_3282	0.87	-2.7
3,900,460	+				-2.8
3,900,460	+				-2.8
3,900,461	-				-2.9
3,900,461	-				-1.8
3,900,545	+				-3.9
3,900,550	+				-2.9
3,900,551	-				-3.3
3,900,554	+				-1.0
3,900,561	-				-2.4
3,900,567	+				-1.4
3,900,568	-				-2.9
3,900,574	+				-1.3
3,900,574	+				-3.2
3,900,574	+				-1.8
3,900,575	-				-1.6
3,900,575	-				-1.3
3,900,575	-				-1.3
3,900,575	-				-1.4
3,900,613	+				-2.5
3,900,613	+				-1.9
3,900,614	-				-1.9
3,900,614	-				-0.0
3,900,616	+				-3.8
3,900,617	-				-1.1
3,900,617	-				+0.1
3,900,617	-				-1.5
3,900,617	-				+0.9
3,900,617	-				-1.4
3,900,617	-				-0.3
3,900,647	+				-2.9
3,900,647	+				-2.1
3,900,647	+				-4.1
3,900,647	+				+0.0
3,900,648	-				-1.4
3,900,648	-				-1.8
3,900,659	-				-1.5
3,900,659	-				-2.2
3,900,748	+				-0.9
3,900,748	+				-1.1
3,900,748	+				-1.4
3,900,748	+				-0.5
3,900,748	+				+0.2
3,900,748	+				-0.4
3,900,748	+				+1.6
3,900,748	+				-2.9
3,900,748	+				-1.4
3,900,748	+				+1.0
3,900,748	+				-2.2
3,900,749	-				-3.1
3,900,749	-				-1.7
3,900,749	-				-3.1
3,900,749	-				-2.9
3,900,749	-				-2.5
3,900,749	-				-2.7
3,900,749	-				-1.7
3,900,752	+				-4.2
3,900,752	+				-2.3
3,900,752	+				-1.5
3,900,753	-				-2.6
3,900,753	-				-3.6
3,900,753	-				-3.5
3,900,753	-				-2.9
3,900,753	-				-2.6
3,900,753	-				-3.4
3,900,781	+				-4.3
3,900,781	+				-1.5
3,900,782	-				-3.0
3,900,782	-				-2.2
3,900,792	+				-3.6
3,900,793	-				-1.0
3,900,793	-				-3.3
3,900,793	-				-1.5
3,900,805	-				-3.4
3,900,870	+		Sama_3283	0.11	-4.9
3,900,870	+		Sama_3283	0.11	-3.7
3,900,871	-		Sama_3283	0.11	-3.5
3,900,985	+		Sama_3283	0.24	-3.0
3,900,985	+		Sama_3283	0.24	-1.8
3,900,985	+		Sama_3283	0.24	-4.0
3,900,986	-		Sama_3283	0.24	-4.0
3,900,986	-		Sama_3283	0.24	-2.0
3,900,986	-		Sama_3283	0.24	-2.9
3,900,986	-		Sama_3283	0.24	-3.6
3,900,986	-		Sama_3283	0.24	-1.7
3,900,994	+		Sama_3283	0.25	-2.9
3,900,994	+		Sama_3283	0.25	-4.3
3,900,994	+		Sama_3283	0.25	-2.8
3,900,994	+		Sama_3283	0.25	-1.9
3,900,994	+		Sama_3283	0.25	-1.7
3,900,994	+		Sama_3283	0.25	-2.3
3,900,995	-		Sama_3283	0.25	-3.9
3,900,995	-		Sama_3283	0.25	-2.3
3,900,995	-		Sama_3283	0.25	-2.2
3,900,995	-		Sama_3283	0.25	-0.5
3,900,995	-		Sama_3283	0.25	-2.3
3,901,011	+		Sama_3283	0.27	-2.0
3,901,011	+		Sama_3283	0.27	-4.2
3,901,062	-		Sama_3283	0.33	-4.1
3,901,062	-		Sama_3283	0.33	-2.1
3,901,062	-		Sama_3283	0.33	-2.0
3,901,082	+		Sama_3283	0.35	-2.7
3,901,082	+		Sama_3283	0.35	-3.0
3,901,082	+		Sama_3283	0.35	-1.8
3,901,082	+		Sama_3283	0.35	-3.0
3,901,083	-		Sama_3283	0.35	-2.9
3,901,083	-		Sama_3283	0.35	-3.0
3,901,276	+		Sama_3283	0.57	-4.6
3,901,354	+		Sama_3283	0.66	-3.6
3,901,355	-		Sama_3283	0.66	-3.6
3,901,428	+		Sama_3283	0.74	+0.5
3,901,428	+		Sama_3283	0.74	-3.9
3,901,428	+		Sama_3283	0.74	-3.1
3,901,428	+		Sama_3283	0.74	-1.1
3,901,428	+		Sama_3283	0.74	-2.3
3,901,428	+		Sama_3283	0.74	-3.1
3,901,428	+		Sama_3283	0.74	-3.2
3,901,428	+		Sama_3283	0.74	-2.5
3,901,429	-		Sama_3283	0.74	-3.0
3,901,429	-		Sama_3283	0.74	-0.9
3,901,429	-		Sama_3283	0.74	-3.4
3,901,429	-		Sama_3283	0.74	-3.4
3,901,429	-		Sama_3283	0.74	-3.7
3,901,429	-		Sama_3283	0.74	-3.6
3,901,429	-		Sama_3283	0.74	-2.3
3,901,429	-		Sama_3283	0.74	-1.0
3,901,429	-		Sama_3283	0.74	-3.7
3,901,429	-		Sama_3283	0.74	-2.7
3,901,429	-		Sama_3283	0.74	-1.0
3,901,429	-		Sama_3283	0.74	-3.1
3,901,429	-		Sama_3283	0.74	-4.1
3,901,429	-		Sama_3283	0.74	-4.4
3,901,430	+		Sama_3283	0.74	-2.3
3,901,430	+		Sama_3283	0.74	-1.5
3,901,430	+		Sama_3283	0.74	-4.4
3,901,431	-		Sama_3283	0.75	-2.0
3,901,431	-		Sama_3283	0.75	-4.5
3,901,431	-		Sama_3283	0.75	-1.0
3,901,431	-		Sama_3283	0.75	-2.0
3,901,431	-		Sama_3283	0.75	-3.5
3,901,431	-		Sama_3283	0.75	-1.7
3,901,431	-		Sama_3283	0.75	-1.4
3,901,459	+		Sama_3283	0.78	-2.0
3,901,459	+		Sama_3283	0.78	-3.5
3,901,460	-		Sama_3283	0.78	-4.1
3,901,460	-		Sama_3283	0.78	-1.8
3,901,492	+		Sama_3283	0.81	-1.9
3,901,492	+		Sama_3283	0.81	-3.4
3,901,492	+		Sama_3283	0.81	-2.4
3,901,492	+		Sama_3283	0.81	-2.7
3,901,493	-		Sama_3283	0.82	-4.0
3,901,546	+		Sama_3283	0.88	+0.0
3,901,546	+		Sama_3283	0.88	-4.2
3,901,547	-		Sama_3283	0.88	-1.4
3,901,547	-		Sama_3283	0.88	-2.7
3,901,649	+				-0.4
3,901,649	+				-0.7
3,901,649	+				-0.2
3,901,649	+				+0.0
3,901,649	+				+2.2
3,901,650	-				-0.2
3,901,650	-				-0.1
3,901,650	-				+1.6
3,901,650	-				+0.8
3,901,650	-				+1.5
3,901,652	+				-1.1
3,901,653	-				+0.7
3,901,653	-				-0.4
3,901,653	-				-0.9
3,901,653	-				-0.7
3,901,682	-				-0.4
3,901,682	-				-0.4
3,901,769	+				-1.6
3,901,769	+				-1.8
3,901,769	+				-2.0
3,901,769	+				-2.9
3,901,769	+				-2.1
3,901,769	+				-3.4
3,901,769	+				-3.0
3,901,769	+				-1.3
3,901,769	+				-1.0
3,901,769	+				-3.1
3,901,770	-				-0.3
3,901,770	-				+0.0
3,901,770	-				-1.0
3,901,770	-				-1.9
3,901,770	-				-0.1
3,901,770	-				-3.0
3,901,770	-				-2.6
3,901,770	-				-3.9
3,901,770	-				-1.9
3,901,799	+				+0.3
3,901,808	+				-3.0
3,901,808	+				-3.9
3,901,825	-				-2.7
3,901,839	+		Sama_3284	0.10	-3.7
3,901,839	+		Sama_3284	0.10	-3.3
3,901,840	-		Sama_3284	0.10	-1.0
3,901,848	+		Sama_3284	0.11	-0.5
3,901,848	+		Sama_3284	0.11	-1.0
3,901,848	+		Sama_3284	0.11	-1.1
3,901,848	+		Sama_3284	0.11	-0.5
3,901,848	+		Sama_3284	0.11	-1.5
3,901,849	-		Sama_3284	0.11	-2.6
3,901,849	-		Sama_3284	0.11	-0.6
3,901,849	-		Sama_3284	0.11	-0.8
3,901,849	-		Sama_3284	0.11	-1.4
3,901,849	-		Sama_3284	0.11	-1.1
3,901,855	-		Sama_3284	0.11	-2.3
3,901,855	-		Sama_3284	0.11	-1.3
3,901,855	-		Sama_3284	0.11	-0.7
3,901,855	-		Sama_3284	0.11	+0.6
3,901,855	-		Sama_3284	0.11	-2.7
3,901,877	+		Sama_3284	0.13	-1.0
3,901,877	+		Sama_3284	0.13	-1.4
3,901,877	+		Sama_3284	0.13	+1.0
3,901,877	+		Sama_3284	0.13	-1.4
3,901,877	+		Sama_3284	0.13	-0.7
3,901,878	-		Sama_3284	0.13	-1.5
3,901,878	-		Sama_3284	0.13	-0.8
3,901,878	-		Sama_3284	0.13	-3.1
3,901,878	-		Sama_3284	0.13	-2.6
3,901,929	+		Sama_3284	0.17	+0.5
3,901,929	+		Sama_3284	0.17	-0.8
3,901,930	-		Sama_3284	0.17	-1.5
3,901,930	-		Sama_3284	0.17	-1.3
3,901,930	-		Sama_3284	0.17	-0.2
3,901,933	-		Sama_3284	0.17	-1.4
3,901,933	-		Sama_3284	0.17	-1.0
3,902,066	+		Sama_3284	0.27	-2.7
3,902,066	+		Sama_3284	0.27	-1.1
3,902,066	+		Sama_3284	0.27	-0.8
3,902,066	+		Sama_3284	0.27	+0.3
3,902,066	+		Sama_3284	0.27	-2.3
3,902,067	-		Sama_3284	0.27	-0.3
3,902,067	-		Sama_3284	0.27	-1.2
3,902,067	-		Sama_3284	0.27	-3.6
3,902,067	-		Sama_3284	0.27	-1.9
3,902,103	+		Sama_3284	0.30	-0.8
3,902,104	-		Sama_3284	0.30	+0.1
3,902,104	-		Sama_3284	0.30	-0.4
3,902,111	+		Sama_3284	0.31	-1.8
3,902,111	+		Sama_3284	0.31	-1.8
3,902,112	-		Sama_3284	0.31	-2.6
3,902,149	-		Sama_3284	0.34	-1.4
3,902,164	+		Sama_3284	0.35	-0.8
3,902,164	+		Sama_3284	0.35	-2.1
3,902,165	-		Sama_3284	0.35	+0.0
3,902,188	+		Sama_3284	0.37	+0.2
3,902,189	-		Sama_3284	0.37	-3.0
3,902,203	+		Sama_3284	0.38	+1.6
3,902,214	+		Sama_3284	0.39	-3.5
3,902,214	+		Sama_3284	0.39	+0.1
3,902,215	-		Sama_3284	0.39	-2.0
3,902,215	-		Sama_3284	0.39	-2.7
3,902,237	+		Sama_3284	0.40	-1.2
3,902,237	+		Sama_3284	0.40	-1.0
3,902,237	+		Sama_3284	0.40	-4.1
3,902,237	+		Sama_3284	0.40	-2.1
3,902,237	+		Sama_3284	0.40	-2.1
3,902,237	+		Sama_3284	0.40	+0.0
3,902,237	+		Sama_3284	0.40	-0.3
3,902,238	-		Sama_3284	0.40	-1.2
3,902,238	-		Sama_3284	0.40	-0.3
3,902,238	-		Sama_3284	0.40	+0.5
3,902,304	+		Sama_3284	0.45	-1.1
3,902,437	-		Sama_3284	0.56	-1.2
3,902,437	-		Sama_3284	0.56	-2.3
3,902,437	-		Sama_3284	0.56	-3.0
3,902,437	-		Sama_3284	0.56	-1.7
3,902,471	+		Sama_3284	0.58	-2.6
3,902,471	+		Sama_3284	0.58	-2.7
3,902,472	-		Sama_3284	0.58	-3.6
3,902,472	-		Sama_3284	0.58	-1.7
3,902,500	-		Sama_3284	0.60	-2.1
3,902,523	+		Sama_3284	0.62	-1.5
3,902,632	-		Sama_3284	0.70	-0.6
3,902,632	-		Sama_3284	0.70	-2.4