Strain Fitness in Shewanella amazonensis SB2B around Sama_3275

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,889,373	+		Sama_3274	0.48	-0.3
3,889,373	+		Sama_3274	0.48	+0.5
3,889,373	+		Sama_3274	0.48	+1.0
3,889,374	-		Sama_3274	0.48	+0.4
3,889,374	-		Sama_3274	0.48	+2.0
3,889,374	-		Sama_3274	0.48	-1.3
3,889,374	-		Sama_3274	0.48	-0.9
3,889,374	-		Sama_3274	0.48	+1.0
3,889,374	-		Sama_3274	0.48	+0.4
3,889,374	-		Sama_3274	0.48	-2.5
3,889,437	-		Sama_3274	0.52	-0.1
3,889,463	+		Sama_3274	0.54	+1.0
3,889,561	+		Sama_3274	0.61	-0.5
3,889,561	+		Sama_3274	0.61	-0.5
3,889,561	+		Sama_3274	0.61	-0.2
3,889,562	-		Sama_3274	0.61	+0.1
3,889,577	+		Sama_3274	0.62	-1.0
3,889,578	-		Sama_3274	0.62	-0.0
3,889,614	+		Sama_3274	0.64	-0.5
3,889,614	+		Sama_3274	0.64	+0.1
3,889,614	+		Sama_3274	0.64	+1.0
3,889,614	+		Sama_3274	0.64	+0.3
3,889,615	-		Sama_3274	0.64	-0.7
3,889,615	-		Sama_3274	0.64	-0.4
3,889,615	-		Sama_3274	0.64	+0.3
3,889,615	-		Sama_3274	0.64	-0.0
3,889,615	-		Sama_3274	0.64	+0.5
3,889,698	+		Sama_3274	0.70	-0.0
3,889,708	+		Sama_3274	0.71	+1.0
3,889,708	+		Sama_3274	0.71	-0.5
3,889,709	-		Sama_3274	0.71	+0.7
3,889,709	-		Sama_3274	0.71	+1.1
3,889,721	+		Sama_3274	0.72	-0.5
3,889,721	+		Sama_3274	0.72	+1.5
3,889,721	+		Sama_3274	0.72	+0.2
3,889,722	-		Sama_3274	0.72	-0.3
3,889,722	-		Sama_3274	0.72	+0.5
3,889,722	-		Sama_3274	0.72	+0.7
3,889,722	-		Sama_3274	0.72	+0.2
3,889,722	-		Sama_3274	0.72	-0.7
3,889,725	+		Sama_3274	0.72	+0.7
3,889,725	+		Sama_3274	0.72	-0.4
3,889,725	+		Sama_3274	0.72	+1.2
3,889,726	-		Sama_3274	0.72	+0.1
3,889,726	-		Sama_3274	0.72	+1.3
3,889,726	-		Sama_3274	0.72	-0.5
3,889,754	+		Sama_3274	0.74	-0.5
3,889,755	-		Sama_3274	0.74	+0.7
3,889,810	-		Sama_3274	0.78	+0.5
3,889,810	-		Sama_3274	0.78	+0.8
3,889,810	-		Sama_3274	0.78	-0.1
3,889,810	-		Sama_3274	0.78	-0.1
3,889,892	+		Sama_3274	0.84	-0.5
3,889,893	-		Sama_3274	0.84	-2.0
3,889,932	+		Sama_3274	0.86	+1.0
3,889,932	+		Sama_3274	0.86	-1.3
3,889,932	+		Sama_3274	0.86	+1.2
3,889,932	+		Sama_3274	0.86	+1.2
3,889,932	+		Sama_3274	0.86	-2.4
3,889,933	-		Sama_3274	0.87	+0.6
3,889,933	-		Sama_3274	0.87	-1.8
3,889,933	-		Sama_3274	0.87	+0.8
3,889,956	+		Sama_3274	0.88	+1.8
3,889,957	-		Sama_3274	0.88	+0.1
3,889,957	-		Sama_3274	0.88	+1.2
3,889,998	+				+3.6
3,889,998	+				+0.1
3,889,998	+				+0.9
3,889,999	-				-0.6
3,889,999	-				-0.3
3,889,999	-				+0.1
3,890,010	+				+0.1
3,890,010	+				+0.3
3,890,010	+				+0.6
3,890,011	-				+0.2
3,890,011	-				-2.4
3,890,011	-				+0.6
3,890,011	-				-1.8
3,890,034	+				-0.2
3,890,034	+				+0.1
3,890,034	+				-1.1
3,890,034	+				-1.1
3,890,035	-				-0.1
3,890,035	-				+0.8
3,890,035	-				+0.0
3,890,035	-				+0.5
3,890,035	-				+0.7
3,890,066	+				-1.6
3,890,088	+				-1.1
3,890,088	+				+0.8
3,890,088	+				-0.7
3,890,089	-				+0.1
3,890,089	-				+0.2
3,890,089	-				-0.7
3,890,108	+				-0.8
3,890,108	+				+0.7
3,890,108	+				-0.7
3,890,124	+				-0.8
3,890,125	-				+0.4
3,890,182	+				-0.0
3,890,182	+				+0.0
3,890,182	+				-1.9
3,890,182	+				+1.7
3,890,183	-				-1.1
3,890,183	-				+0.5
3,890,183	-				+1.0
3,890,231	+				+0.3
3,890,250	+				-2.5
3,890,250	+				+1.3
3,890,251	-				-1.1
3,890,251	-				+0.8
3,890,283	+				-1.7
3,890,284	-				+1.0
3,890,345	+				-0.4
3,890,345	+				-0.2
3,890,345	+				-0.9
3,890,346	-				+0.9
3,890,346	-				+0.1
3,890,346	-				-0.3
3,890,355	-		Sama_3275	0.10	+0.2
3,890,434	+		Sama_3275	0.20	-0.1
3,890,434	+		Sama_3275	0.20	+1.3
3,890,435	-		Sama_3275	0.20	-0.3
3,890,435	-		Sama_3275	0.20	-0.5
3,890,492	+		Sama_3275	0.28	-0.0
3,890,492	+		Sama_3275	0.28	+0.3
3,890,493	-		Sama_3275	0.28	+2.4
3,890,505	+		Sama_3275	0.29	+1.5
3,890,506	-		Sama_3275	0.30	-0.5
3,890,506	-		Sama_3275	0.30	+1.1
3,890,537	+		Sama_3275	0.33	-0.2
3,890,537	+		Sama_3275	0.33	-1.5
3,890,537	+		Sama_3275	0.33	+0.5
3,890,538	-		Sama_3275	0.34	-0.6
3,890,538	-		Sama_3275	0.34	-0.4
3,890,604	+		Sama_3275	0.42	-0.7
3,890,605	-		Sama_3275	0.42	+0.7
3,890,624	+		Sama_3275	0.45	-1.1
3,890,624	+		Sama_3275	0.45	-0.7
3,890,624	+		Sama_3275	0.45	+0.5
3,890,624	+		Sama_3275	0.45	-1.5
3,890,624	+		Sama_3275	0.45	+0.7
3,890,624	+		Sama_3275	0.45	+0.3
3,890,624	+		Sama_3275	0.45	-2.0
3,890,624	+		Sama_3275	0.45	-0.6
3,890,624	+		Sama_3275	0.45	-1.7
3,890,624	+		Sama_3275	0.45	+0.1
3,890,624	+		Sama_3275	0.45	+0.2
3,890,624	+		Sama_3275	0.45	-0.6
3,890,624	+		Sama_3275	0.45	-0.6
3,890,624	+		Sama_3275	0.45	+0.8
3,890,624	+		Sama_3275	0.45	+0.8
3,890,624	+		Sama_3275	0.45	+0.2
3,890,625	-		Sama_3275	0.45	-0.9
3,890,625	-		Sama_3275	0.45	+0.2
3,890,625	-		Sama_3275	0.45	+0.9
3,890,625	-		Sama_3275	0.45	+0.5
3,890,625	-		Sama_3275	0.45	+0.7
3,890,625	-		Sama_3275	0.45	-1.1
3,890,625	-		Sama_3275	0.45	-0.4
3,890,625	-		Sama_3275	0.45	+1.7
3,890,625	-		Sama_3275	0.45	+0.3
3,890,625	-		Sama_3275	0.45	+1.4
3,890,625	-		Sama_3275	0.45	-0.2
3,890,655	+		Sama_3275	0.49	-1.6
3,890,669	-		Sama_3275	0.50	-0.9
3,890,722	-		Sama_3275	0.57	-1.4
3,890,831	+		Sama_3275	0.71	-0.5
3,890,987	+				-0.6
3,890,996	+				-1.8
3,890,996	+				-0.0
3,890,996	+				-0.5
3,890,997	-				+1.8
3,890,997	-				+0.2
3,891,026	+				+0.9
3,891,026	+				-1.0
3,891,055	+				-0.1
3,891,056	-				+1.2
3,891,056	-				-1.9
3,891,085	+				-0.4
3,891,138	+		Sama_3276	0.11	+0.3
3,891,210	-		Sama_3276	0.21	-1.3
3,891,237	-		Sama_3276	0.25	+1.0
3,891,237	-		Sama_3276	0.25	-1.0
3,891,237	-		Sama_3276	0.25	+0.0
3,891,237	-		Sama_3276	0.25	-1.9
3,891,253	+		Sama_3276	0.27	-1.4
3,891,253	+		Sama_3276	0.27	-0.7
3,891,253	+		Sama_3276	0.27	+0.7
3,891,254	-		Sama_3276	0.27	+0.8
3,891,254	-		Sama_3276	0.27	+1.3
3,891,278	+		Sama_3276	0.30	-0.2
3,891,278	+		Sama_3276	0.30	-0.1
3,891,279	-		Sama_3276	0.30	+1.0
3,891,289	+		Sama_3276	0.32	-1.9
3,891,289	+		Sama_3276	0.32	-0.7
3,891,289	+		Sama_3276	0.32	+1.4
3,891,290	-		Sama_3276	0.32	+0.8
3,891,290	-		Sama_3276	0.32	+0.2
3,891,290	-		Sama_3276	0.32	-1.6
3,891,290	-		Sama_3276	0.32	-0.4
3,891,290	-		Sama_3276	0.32	-0.3
3,891,291	+		Sama_3276	0.32	-1.0
3,891,291	+		Sama_3276	0.32	-1.1
3,891,291	+		Sama_3276	0.32	-0.7
3,891,291	+		Sama_3276	0.32	-1.6
3,891,291	+		Sama_3276	0.32	-0.9
3,891,291	+		Sama_3276	0.32	+0.9
3,891,291	+		Sama_3276	0.32	+0.5
3,891,291	+		Sama_3276	0.32	-0.3
3,891,291	+		Sama_3276	0.32	+0.6
3,891,291	+		Sama_3276	0.32	-0.0
3,891,291	+		Sama_3276	0.32	+0.8
3,891,291	+		Sama_3276	0.32	+0.2
3,891,291	+		Sama_3276	0.32	-0.0
3,891,292	-		Sama_3276	0.32	+0.2
3,891,292	-		Sama_3276	0.32	-0.3
3,891,292	-		Sama_3276	0.32	-0.5
3,891,292	-		Sama_3276	0.32	+0.3
3,891,292	-		Sama_3276	0.32	+0.3
3,891,292	-		Sama_3276	0.32	-0.1
3,891,292	-		Sama_3276	0.32	+0.2
3,891,335	+		Sama_3276	0.38	-0.2
3,891,335	+		Sama_3276	0.38	+0.8
3,891,335	+		Sama_3276	0.38	-1.3
3,891,335	+		Sama_3276	0.38	-0.4
3,891,336	-		Sama_3276	0.38	+2.4
3,891,336	-		Sama_3276	0.38	+0.6
3,891,336	-		Sama_3276	0.38	-0.6
3,891,336	-		Sama_3276	0.38	+0.5
3,891,344	+		Sama_3276	0.39	-1.0
3,891,345	-		Sama_3276	0.39	-0.4
3,891,345	-		Sama_3276	0.39	-0.7
3,891,345	-		Sama_3276	0.39	+1.2
3,891,345	-		Sama_3276	0.39	-1.0
3,891,353	+		Sama_3276	0.40	-0.0
3,891,354	-		Sama_3276	0.40	+0.0
3,891,355	+		Sama_3276	0.40	+0.1
3,891,355	+		Sama_3276	0.40	-0.6
3,891,355	+		Sama_3276	0.40	-1.1
3,891,355	+		Sama_3276	0.40	-1.6
3,891,355	+		Sama_3276	0.40	+2.0
3,891,355	+		Sama_3276	0.40	-1.5
3,891,408	-		Sama_3276	0.48	+1.3
3,891,408	-		Sama_3276	0.48	-1.3
3,891,458	+		Sama_3276	0.54	-0.4
3,891,478	+		Sama_3276	0.57	-0.8
3,891,478	+		Sama_3276	0.57	+1.1
3,891,478	+		Sama_3276	0.57	+0.1
3,891,484	+		Sama_3276	0.58	+0.0
3,891,484	+		Sama_3276	0.58	+1.0
3,891,484	+		Sama_3276	0.58	-1.7
3,891,484	+		Sama_3276	0.58	+1.5
3,891,484	+		Sama_3276	0.58	-0.3
3,891,485	-		Sama_3276	0.58	-1.0
3,891,485	-		Sama_3276	0.58	-2.9
3,891,485	-		Sama_3276	0.58	-0.1
3,891,485	-		Sama_3276	0.58	+0.8
3,891,485	-		Sama_3276	0.58	-0.1
3,891,485	-		Sama_3276	0.58	+0.8
3,891,485	-		Sama_3276	0.58	-0.5
3,891,534	+		Sama_3276	0.65	+0.2
3,891,535	-		Sama_3276	0.65	-1.8
3,891,567	+		Sama_3276	0.69	-0.2
3,891,567	+		Sama_3276	0.69	+0.6
3,891,568	-		Sama_3276	0.69	+0.4
3,891,586	+		Sama_3276	0.72	-2.5
3,891,674	+		Sama_3276	0.83	-1.1
3,891,674	+		Sama_3276	0.83	+0.6
3,891,674	+		Sama_3276	0.83	+0.2
3,891,674	+		Sama_3276	0.83	-0.1
3,891,676	+		Sama_3276	0.84	+1.0
3,891,713	+		Sama_3276	0.89	-0.8
3,891,750	+				-0.7
3,891,751	-				+0.7
3,891,762	+				-1.8
3,891,762	+				+1.0
3,891,780	+				-0.0
3,891,780	+				+1.0
3,891,780	+				-0.5
3,891,781	-				+0.3
3,891,783	+				+0.6
3,891,784	-				+0.8
3,891,784	-				+2.4
3,891,784	-				+0.0
3,891,786	+				+1.3
3,891,786	+				+1.2
3,891,787	-				-1.7
3,891,787	-				-1.7
3,891,787	-				+0.7
3,891,804	+				-0.4
3,891,804	+				-0.2
3,891,804	+				+0.1
3,891,804	+				+1.5
3,891,805	-				-2.2
3,891,805	-				-2.5
3,891,805	-				+1.0
3,891,805	-				+0.3
3,891,805	-				+0.2
3,891,854	+				-0.2
3,891,857	+				+0.4
3,891,858	-				-0.5
3,891,858	-				+0.5
3,891,984	+		Sama_3277	0.11	-1.8
3,891,984	+		Sama_3277	0.11	-1.0
3,891,985	-		Sama_3277	0.11	+0.3
3,891,985	-		Sama_3277	0.11	-1.3
3,891,985	-		Sama_3277	0.11	-0.7
3,891,985	-		Sama_3277	0.11	-0.2
3,891,986	+		Sama_3277	0.11	-2.1
3,891,986	+		Sama_3277	0.11	+1.6
3,891,987	-		Sama_3277	0.12	+0.4
3,891,987	-		Sama_3277	0.12	-0.1
3,891,993	+		Sama_3277	0.12	+1.3
3,891,994	-		Sama_3277	0.12	+0.5
3,892,040	+		Sama_3277	0.16	+0.2
3,892,041	-		Sama_3277	0.16	+0.9