Strain Fitness in Shewanella amazonensis SB2B around Sama_2964

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,526,826	+				-1.1
3,526,834	-				+1.9
3,526,834	-				-2.0
3,526,856	+				+0.2
3,526,856	+				-0.4
3,526,856	+				+0.3
3,526,857	-				+0.4
3,526,870	+				+0.1
3,526,870	+				+2.0
3,526,909	+				-0.8
3,526,909	+				+1.6
3,526,909	+				-0.1
3,526,910	-				+1.6
3,526,923	+				+0.8
3,526,924	-				+0.0
3,526,967	+				+0.9
3,526,968	-				+0.3
3,526,991	+				+1.6
3,526,991	+				-0.7
3,526,992	-				-0.1
3,527,008	-				+0.4
3,527,008	-				-0.2
3,527,008	-				+0.8
3,527,010	+				-0.3
3,527,022	+				-0.0
3,527,022	+				-0.5
3,527,023	-				-1.3
3,527,023	-				-0.1
3,527,025	+				-0.4
3,527,026	-				+2.0
3,527,045	+				-0.1
3,527,046	-				-1.3
3,527,064	+				-0.3
3,527,064	+				-0.3
3,527,064	+				-1.6
3,527,102	-				+1.6
3,527,125	+				-0.7
3,527,141	-				+1.7
3,527,154	+				+0.8
3,527,154	+				+1.0
3,527,154	+				+1.1
3,527,155	-				-0.8
3,527,202	-		Sama_2963	0.23	+0.4
3,527,202	-		Sama_2963	0.23	-1.1
3,527,276	+		Sama_2963	0.58	+0.6
3,527,276	+		Sama_2963	0.58	+0.0
3,527,277	-		Sama_2963	0.58	+0.8
3,527,277	-		Sama_2963	0.58	+0.0
3,527,277	-		Sama_2963	0.58	-1.3
3,527,277	-		Sama_2963	0.58	-0.2
3,527,277	-		Sama_2963	0.58	-2.8
3,527,305	+		Sama_2963	0.71	-2.4
3,527,340	-		Sama_2963	0.88	+1.0
3,527,351	-				+0.5
3,527,351	-				-1.9
3,527,365	+				-0.1
3,527,365	+				-0.9
3,527,365	+				+0.4
3,527,366	-				+0.3
3,527,366	-				-0.7
3,527,366	-				-0.9
3,527,370	-				+0.5
3,527,399	+				+0.3
3,527,400	-				+1.4
3,527,432	+				-0.0
3,527,483	+				+2.8
3,527,489	+				-0.3
3,527,490	-				+0.8
3,527,493	-				-0.1
3,527,519	+				-0.3
3,527,519	+				+1.3
3,527,522	-				-0.4
3,527,522	-				-0.6
3,527,522	-				-0.7
3,527,593	+				+0.2
3,527,623	-				-0.8
3,527,745	+				-0.6
3,527,745	+				-2.1
3,527,746	-				-0.6
3,527,766	+				+3.1
3,527,767	-				-0.6
3,527,801	+				+1.4
3,527,802	-				+0.7
3,527,881	+				+1.8
3,527,882	-				+0.1
3,527,919	-		Sama_2964	0.10	-0.3
3,527,938	-		Sama_2964	0.12	-1.6
3,527,993	+		Sama_2964	0.17	-1.0
3,527,993	+		Sama_2964	0.17	+0.6
3,527,994	-		Sama_2964	0.17	+1.2
3,527,994	-		Sama_2964	0.17	-0.6
3,527,994	-		Sama_2964	0.17	-0.4
3,528,022	+		Sama_2964	0.20	+1.1
3,528,023	-		Sama_2964	0.20	+0.6
3,528,023	-		Sama_2964	0.20	+0.5
3,528,023	-		Sama_2964	0.20	-1.4
3,528,085	+		Sama_2964	0.25	+1.5
3,528,085	+		Sama_2964	0.25	+0.4
3,528,085	+		Sama_2964	0.25	+0.2
3,528,085	+		Sama_2964	0.25	-1.6
3,528,085	+		Sama_2964	0.25	+1.3
3,528,085	+		Sama_2964	0.25	-0.0
3,528,085	+		Sama_2964	0.25	-0.3
3,528,085	+		Sama_2964	0.25	+0.8
3,528,085	+		Sama_2964	0.25	+0.2
3,528,086	-		Sama_2964	0.25	-0.5
3,528,088	-		Sama_2964	0.25	-0.3
3,528,088	-		Sama_2964	0.25	+1.6
3,528,158	+		Sama_2964	0.31	-0.5
3,528,158	+		Sama_2964	0.31	+0.7
3,528,158	+		Sama_2964	0.31	+1.0
3,528,158	+		Sama_2964	0.31	+0.4
3,528,158	+		Sama_2964	0.31	+0.4
3,528,158	+		Sama_2964	0.31	+0.1
3,528,158	+		Sama_2964	0.31	-0.5
3,528,159	-		Sama_2964	0.32	+1.0
3,528,159	-		Sama_2964	0.32	+2.6
3,528,159	-		Sama_2964	0.32	+0.7
3,528,159	-		Sama_2964	0.32	-0.7
3,528,159	-		Sama_2964	0.32	-0.5
3,528,159	-		Sama_2964	0.32	-1.9
3,528,159	-		Sama_2964	0.32	+0.0
3,528,159	-		Sama_2964	0.32	+0.4
3,528,159	-		Sama_2964	0.32	+0.5
3,528,189	-		Sama_2964	0.34	+2.2
3,528,220	-		Sama_2964	0.37	-2.7
3,528,220	-		Sama_2964	0.37	+1.0
3,528,224	-		Sama_2964	0.37	-0.1
3,528,224	-		Sama_2964	0.37	-0.1
3,528,224	-		Sama_2964	0.37	+0.8
3,528,224	-		Sama_2964	0.37	-0.5
3,528,224	-		Sama_2964	0.37	-0.6
3,528,256	-		Sama_2964	0.40	+2.2
3,528,256	-		Sama_2964	0.40	+1.9
3,528,265	+		Sama_2964	0.41	+0.5
3,528,265	+		Sama_2964	0.41	-0.2
3,528,265	+		Sama_2964	0.41	-1.0
3,528,265	+		Sama_2964	0.41	-2.1
3,528,266	-		Sama_2964	0.41	-0.2
3,528,266	-		Sama_2964	0.41	+1.2
3,528,266	-		Sama_2964	0.41	-1.4
3,528,266	-		Sama_2964	0.41	-0.6
3,528,266	-		Sama_2964	0.41	-0.2
3,528,284	+		Sama_2964	0.43	+1.4
3,528,284	+		Sama_2964	0.43	-0.4
3,528,284	+		Sama_2964	0.43	-1.4
3,528,284	+		Sama_2964	0.43	-1.4
3,528,284	+		Sama_2964	0.43	+0.7
3,528,284	+		Sama_2964	0.43	-0.1
3,528,284	+		Sama_2964	0.43	+1.7
3,528,284	+		Sama_2964	0.43	+1.0
3,528,284	+		Sama_2964	0.43	-0.6
3,528,284	+		Sama_2964	0.43	-2.5
3,528,284	+		Sama_2964	0.43	-3.1
3,528,285	-		Sama_2964	0.43	-0.7
3,528,285	-		Sama_2964	0.43	-1.1
3,528,285	-		Sama_2964	0.43	-0.8
3,528,285	-		Sama_2964	0.43	-0.8
3,528,285	-		Sama_2964	0.43	+0.6
3,528,285	-		Sama_2964	0.43	+0.7
3,528,285	-		Sama_2964	0.43	+1.7
3,528,294	+		Sama_2964	0.43	-2.6
3,528,294	+		Sama_2964	0.43	-0.0
3,528,294	+		Sama_2964	0.43	+0.4
3,528,400	+		Sama_2964	0.53	+1.5
3,528,400	+		Sama_2964	0.53	-2.0
3,528,400	+		Sama_2964	0.53	+1.2
3,528,400	+		Sama_2964	0.53	-1.4
3,528,401	-		Sama_2964	0.53	+0.5
3,528,484	-		Sama_2964	0.60	-0.8
3,528,503	+		Sama_2964	0.62	+0.1
3,528,504	-		Sama_2964	0.62	+1.8
3,528,504	-		Sama_2964	0.62	+1.3
3,528,622	-		Sama_2964	0.72	-0.8
3,528,622	-		Sama_2964	0.72	-1.0
3,528,698	+		Sama_2964	0.79	-0.3
3,528,698	+		Sama_2964	0.79	+0.6
3,528,699	-		Sama_2964	0.79	+0.5
3,528,706	-		Sama_2964	0.80	-0.9
3,528,713	+		Sama_2964	0.80	+1.3
3,528,713	+		Sama_2964	0.80	+2.1
3,528,713	+		Sama_2964	0.80	-0.6
3,528,713	+		Sama_2964	0.80	-1.2
3,528,713	+		Sama_2964	0.80	+0.7
3,528,714	-		Sama_2964	0.80	+0.2
3,528,714	-		Sama_2964	0.80	-1.6
3,528,714	-		Sama_2964	0.80	+1.0
3,528,714	-		Sama_2964	0.80	-0.4
3,528,759	+		Sama_2964	0.84	-0.1
3,528,846	+				+0.4
3,528,846	+				+0.7
3,528,847	-				+0.2
3,528,849	+				-0.0
3,528,849	+				-0.1
3,528,849	+				-0.1
3,528,849	+				-1.0
3,528,849	+				+1.1
3,528,850	-				-0.8
3,528,850	-				+0.2
3,528,850	-				-1.0
3,528,850	-				-2.1
3,528,850	-				-0.6
3,528,850	-				-1.4
3,528,850	-				+0.6
3,528,850	-				-1.4
3,528,896	-				-0.1
3,528,907	+				+0.0
3,528,907	+				-2.1
3,528,907	+				-0.1
3,528,907	+				+0.6
3,528,907	+				-0.9
3,528,908	-				+0.6
3,528,908	-				+2.5
3,528,930	+				-0.7
3,528,930	+				+0.3
3,528,937	-				+0.7
3,528,955	-				+0.1
3,529,002	-				-1.1
3,529,018	+				+0.2
3,529,018	+				-0.4
3,529,018	+				-0.6
3,529,019	-				+3.0
3,529,019	-				+1.6
3,529,051	-				+0.7
3,529,053	+				-1.1
3,529,053	+				-1.3
3,529,054	-				+1.7
3,529,056	+				+0.5
3,529,057	-				-1.4
3,529,076	-				-2.4
3,529,078	-				-0.6
3,529,102	+				-2.2
3,529,102	+				-2.6
3,529,103	-				-1.2
3,529,106	+				+1.0
3,529,107	-				+1.4
3,529,107	-				-1.4
3,529,145	+				+0.7
3,529,196	+				+1.3
3,529,239	+				+0.3
3,529,240	-				-1.4
3,529,415	+		Sama_2965	0.17	-1.9
3,529,415	+		Sama_2965	0.17	+0.1
3,529,415	+		Sama_2965	0.17	+1.5
3,529,415	+		Sama_2965	0.17	-0.0
3,529,415	+		Sama_2965	0.17	-2.2
3,529,416	-		Sama_2965	0.17	-1.8
3,529,416	-		Sama_2965	0.17	+3.5
3,529,416	-		Sama_2965	0.17	-0.9
3,529,416	-		Sama_2965	0.17	-0.1
3,529,416	-		Sama_2965	0.17	-0.6
3,529,446	+		Sama_2965	0.20	+0.8
3,529,446	+		Sama_2965	0.20	-1.2
3,529,447	-		Sama_2965	0.20	+1.0
3,529,481	-		Sama_2965	0.23	-1.0
3,529,481	-		Sama_2965	0.23	+1.4
3,529,508	+		Sama_2965	0.25	+1.7
3,529,508	+		Sama_2965	0.25	+0.0
3,529,559	+		Sama_2965	0.29	-0.1
3,529,559	+		Sama_2965	0.29	+2.0
3,529,559	+		Sama_2965	0.29	+1.0
3,529,559	+		Sama_2965	0.29	+0.8
3,529,559	+		Sama_2965	0.29	-1.5
3,529,559	+		Sama_2965	0.29	-0.2
3,529,559	+		Sama_2965	0.29	+0.2
3,529,560	-		Sama_2965	0.30	-1.0
3,529,560	-		Sama_2965	0.30	+0.3
3,529,560	-		Sama_2965	0.30	+0.0
3,529,560	-		Sama_2965	0.30	+0.3
3,529,576	-		Sama_2965	0.31	+0.4
3,529,595	-		Sama_2965	0.32	+1.3
3,529,627	+		Sama_2965	0.35	+0.8
3,529,628	-		Sama_2965	0.35	-1.0
3,529,646	+		Sama_2965	0.37	+0.2
3,529,646	+		Sama_2965	0.37	+0.1
3,529,646	+		Sama_2965	0.37	+0.1
3,529,646	+		Sama_2965	0.37	+0.7
3,529,646	+		Sama_2965	0.37	+0.3
3,529,647	-		Sama_2965	0.37	-1.0
3,529,647	-		Sama_2965	0.37	+1.9
3,529,647	-		Sama_2965	0.37	+0.3
3,529,710	+		Sama_2965	0.42	+0.2
3,529,711	-		Sama_2965	0.42	-1.0
3,529,785	+		Sama_2965	0.48	+2.4
3,529,786	-		Sama_2965	0.49	+0.4
3,529,786	-		Sama_2965	0.49	-0.3
3,529,847	-		Sama_2965	0.54	-0.9
3,529,912	+		Sama_2965	0.59	+0.6
3,529,913	-		Sama_2965	0.59	-1.5
3,529,913	-		Sama_2965	0.59	+2.5
3,529,913	-		Sama_2965	0.59	-0.3
3,529,913	-		Sama_2965	0.59	+0.4