Strain Fitness in Shewanella amazonensis SB2B around Sama_2891

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,432,567	-		Sama_2890	0.32	-0.5
3,432,670	+		Sama_2890	0.39	-0.3
3,432,671	-		Sama_2890	0.39	-4.4
3,432,671	-		Sama_2890	0.39	-2.0
3,432,783	+		Sama_2890	0.47	-3.2
3,432,784	-		Sama_2890	0.47	-1.9
3,432,784	-		Sama_2890	0.47	-1.1
3,432,784	-		Sama_2890	0.47	-0.3
3,432,870	+		Sama_2890	0.53	-1.4
3,432,871	-		Sama_2890	0.54	-1.3
3,432,952	+		Sama_2890	0.59	-1.7
3,432,952	+		Sama_2890	0.59	-3.0
3,432,953	-		Sama_2890	0.59	-1.5
3,432,953	-		Sama_2890	0.59	-3.5
3,432,975	+		Sama_2890	0.61	-3.0
3,432,976	-		Sama_2890	0.61	-1.0
3,432,976	-		Sama_2890	0.61	-1.4
3,433,075	+		Sama_2890	0.68	-4.1
3,433,076	-		Sama_2890	0.68	-4.3
3,433,076	-		Sama_2890	0.68	-3.0
3,433,076	-		Sama_2890	0.68	-1.7
3,433,076	-		Sama_2890	0.68	-1.0
3,433,166	-		Sama_2890	0.74	-0.5
3,433,166	-		Sama_2890	0.74	-1.1
3,433,176	+		Sama_2890	0.75	-2.1
3,433,176	+		Sama_2890	0.75	-2.5
3,433,176	+		Sama_2890	0.75	-2.0
3,433,177	-		Sama_2890	0.75	-1.5
3,433,177	-		Sama_2890	0.75	-1.1
3,433,177	-		Sama_2890	0.75	-2.0
3,433,177	-		Sama_2890	0.75	-2.0
3,433,233	+		Sama_2890	0.79	-1.9
3,433,234	-		Sama_2890	0.79	-2.3
3,433,245	-		Sama_2890	0.80	-4.0
3,433,290	-		Sama_2890	0.83	-3.5
3,433,324	+		Sama_2890	0.86	-2.5
3,433,331	+		Sama_2890	0.86	-1.9
3,433,331	+		Sama_2890	0.86	-1.1
3,433,450	+				-1.4
3,433,451	-				-2.4
3,433,463	-				-1.8
3,433,463	-				-1.3
3,433,463	-				-2.8
3,433,463	-				-4.0
3,433,463	-				-3.1
3,433,482	+				-2.1
3,433,493	-				-3.1
3,433,504	+				-2.0
3,433,505	-				-2.8
3,433,519	+				-0.4
3,433,519	+				-3.7
3,433,520	-				-2.0
3,433,520	-				-2.4
3,433,520	-				-0.5
3,433,520	-				-3.2
3,433,520	-				-3.5
3,433,679	+		Sama_2891	0.17	-1.4
3,433,680	-		Sama_2891	0.17	-3.6
3,433,744	-		Sama_2891	0.24	-1.8
3,433,744	-		Sama_2891	0.24	-2.1
3,433,744	-		Sama_2891	0.24	-2.1
3,433,808	+		Sama_2891	0.31	-2.9
3,433,809	-		Sama_2891	0.31	-3.1
3,433,809	-		Sama_2891	0.31	-2.4
3,433,809	-		Sama_2891	0.31	-2.8
3,433,809	-		Sama_2891	0.31	-1.7
3,433,809	-		Sama_2891	0.31	-2.7
3,433,819	+		Sama_2891	0.32	-2.7
3,433,819	+		Sama_2891	0.32	-2.5
3,433,819	+		Sama_2891	0.32	-0.5
3,433,819	+		Sama_2891	0.32	-1.3
3,433,819	+		Sama_2891	0.32	-1.9
3,433,820	-		Sama_2891	0.32	-1.3
3,433,820	-		Sama_2891	0.32	-2.1
3,433,839	-		Sama_2891	0.35	-3.4
3,433,839	-		Sama_2891	0.35	-3.3
3,433,844	+		Sama_2891	0.35	-0.8
3,433,844	+		Sama_2891	0.35	-1.5
3,433,844	+		Sama_2891	0.35	-1.1
3,433,845	-		Sama_2891	0.35	-2.9
3,433,845	-		Sama_2891	0.35	-3.7
3,433,845	-		Sama_2891	0.35	-3.4
3,433,845	-		Sama_2891	0.35	-1.5
3,433,923	-		Sama_2891	0.44	-2.6
3,433,923	-		Sama_2891	0.44	-2.7
3,433,923	-		Sama_2891	0.44	-2.8
3,433,988	+		Sama_2891	0.51	-2.8
3,433,989	-		Sama_2891	0.51	-4.8
3,434,058	-		Sama_2891	0.59	-2.3
3,434,058	-		Sama_2891	0.59	-4.2
3,434,058	-		Sama_2891	0.59	-2.8
3,434,058	-		Sama_2891	0.59	-1.8
3,434,058	-		Sama_2891	0.59	-3.4
3,434,186	+		Sama_2891	0.73	-3.7
3,434,186	+		Sama_2891	0.73	-3.5
3,434,334	-		Sama_2891	0.89	-3.7
3,434,334	-		Sama_2891	0.89	-1.8
3,434,416	+				-1.8
3,434,417	-				-4.6
3,434,417	-				-0.3
3,434,451	+				-6.4
3,434,452	-				-3.3
3,434,452	-				-3.1
3,434,452	-				-4.8
3,434,452	-				-2.4
3,434,452	-				-1.8
3,434,453	+				-3.5
3,434,453	+				-2.6
3,434,453	+				-3.2
3,434,454	-				-1.2
3,434,454	-				-2.0
3,434,454	-				-3.3
3,434,569	+		Sama_2892	0.11	-2.3
3,434,753	+		Sama_2892	0.34	-3.5
3,434,753	+		Sama_2892	0.34	-2.2
3,434,753	+		Sama_2892	0.34	-2.2
3,434,754	-		Sama_2892	0.34	-2.4
3,434,754	-		Sama_2892	0.34	-4.9
3,434,754	-		Sama_2892	0.34	-4.1
3,434,754	-		Sama_2892	0.34	-3.4
3,434,754	-		Sama_2892	0.34	-1.0
3,434,754	-		Sama_2892	0.34	-3.2
3,434,754	-		Sama_2892	0.34	-2.5
3,434,754	-		Sama_2892	0.34	-4.9
3,434,754	-		Sama_2892	0.34	-4.0
3,434,754	-		Sama_2892	0.34	-1.4
3,434,783	+		Sama_2892	0.38	-2.3
3,434,784	-		Sama_2892	0.38	-3.1
3,434,833	-		Sama_2892	0.44	-2.5
3,434,833	-		Sama_2892	0.44	-3.0
3,434,866	-		Sama_2892	0.48	-4.7
3,434,883	-		Sama_2892	0.50	-2.5
3,434,883	-		Sama_2892	0.50	-2.8
3,434,983	-		Sama_2892	0.62	-1.3
3,435,025	-		Sama_2892	0.67	-3.2
3,435,025	-		Sama_2892	0.67	-2.0
3,435,051	+		Sama_2892	0.71	-2.4
3,435,052	-		Sama_2892	0.71	-2.2
3,435,158	+		Sama_2892	0.84	-2.1
3,435,159	-		Sama_2892	0.84	-3.2
3,435,277	+				-1.0
3,435,277	+				-0.8
3,435,278	-				-2.1
3,435,278	-				-2.9
3,435,278	-				-3.9
3,435,278	-				-2.7
3,435,278	-				-2.4
3,435,278	-				-2.5
3,435,278	-				-4.5
3,435,288	+				-3.0
3,435,288	+				-1.7
3,435,289	-				-3.0
3,435,289	-				-3.0
3,435,289	-				-3.8
3,435,303	-				-1.3
3,435,320	+				-2.0
3,435,320	+				-3.2
3,435,320	+				-2.9
3,435,321	-				+0.6
3,435,321	-				+0.1
3,435,321	-				-2.7
3,435,323	-				-2.2
3,435,333	-				+1.2
3,435,335	-				-1.0